Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 261-481 |
| Cow position: | chr13:33517642-33517865 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 277-473 |
| Cow position: | chr13:58719258-58719453 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 278-482 |
| Cow position: | chr13:18852340-18852137 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 136, 10 |
| Conread position: | 280-500 |
| Cow position: | chr13:19393550-19393329 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 114, 8 |
| Conread position: | 288-473 |
| Cow position: | chr13:45355530-45355344 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 30 |
| Conread position: | 288-477 |
| Cow position: | chr13:41360007-41359812 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 288-502 |
| Cow position: | chr13:4866724-4866933 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 289-500 |
| Cow position: | chr13:6835554-6835758 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 291-471 |
| Cow position: | chr13:27017138-27017315 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 15 |
| Conread position: | 292-451 |
| Cow position: | chr13:21988852-21989016 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 292-453 |
| Cow position: | chr13:20174989-20174837 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-453 |
| Cow position: | chr13:25817763-25817611 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-458 |
| Cow position: | chr13:38872722-38872884 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-472 |
| Cow position: | chr13:55843734-55843549 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 292-473 |
| Cow position: | chr13:9142532-9142356 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-473 |
| Cow position: | chr13:32283377-32283190 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 292-480 |
| Cow position: | chr13:54095054-54094872 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 167, 13 |
| Conread position: | 292-481 |
| Cow position: | chr13:15740316-15740121 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 292-481 |
| Cow position: | chr13:18166980-18166791 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 292-481 |
| Cow position: | chr13:18244106-18243919 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 292-481 |
| Cow position: | chr13:25434879-25435062 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 292-481 |
| Cow position: | chr13:51940979-51940794 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 163, 13 |
| Conread position: | 292-482 |
| Cow position: | chr13:21287840-21288029 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-482 |
| Cow position: | chr13:37497508-37497692 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 292-502 |
| Cow position: | chr13:21276105-21275890 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-502 |
| Cow position: | chr13:31814117-31813910 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 292-502 |
| Cow position: | chr13:41918916-41919120 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 115, 14 |
| Conread position: | 292-502 |
| Cow position: | chr13:52879660-52879445 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 111, 14 |
| Conread position: | 292-503 |
| Cow position: | chr13:12977812-12977598 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 293-477 |
| Cow position: | chr13:17800321-17800135 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 119, 21 |
| Conread position: | 293-480 |
| Cow position: | chr13:37382060-37381863 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 293-481 |
| Cow position: | chr13:21235436-21235628 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 293-481 |
| Cow position: | chr13:38012610-38012413 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 114, 13 |
| Conread position: | 293-502 |
| Cow position: | chr13:20649732-20649951 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 294-476 |
| Cow position: | chr13:60508868-60509058 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 294-501 |
| Cow position: | chr13:8201237-8201449 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 295-469 |
| Cow position: | chr13:11260500-11260338 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 153, 14 |
| Conread position: | 295-481 |
| Cow position: | chr13:60599695-60599883 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 112, 11 |
| Conread position: | 296-481 |
| Cow position: | chr13:3003693-3003499 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 108, 10 |
| Conread position: | 298-470 |
| Cow position: | chr13:30693945-30693774 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 8 |
| Conread position: | 298-471 |
| Cow position: | chr13:20879591-20879765 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 125, 8 |
| Conread position: | 298-481 |
| Cow position: | chr13:22775068-22775240 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 308-473 |
| Cow position: | chr13:15869355-15869188 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 308-481 |
| Cow position: | chr13:48251756-48251928 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 146, 87 |
| Conread position: | 308-502 |
| Cow position: | chr13:9570217-9570038 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 158, 26 |
| Conread position: | 309-481 |
| Cow position: | chr13:2414260-2414086 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 309-498 |
| Cow position: | chr13:61170481-61170684 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 309-502 |
| Cow position: | chr13:51108724-51108522 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 311-502 |
| Cow position: | chr13:17004361-17004560 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 93, 5 |
| Conread position: | 313-458 |
| Cow position: | chr13:17762842-17762985 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 101 |
| Conread position: | 319-480 |
| Cow position: | chr13:11061212-11061044 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 319-481 |
| Cow position: | chr13:15192669-15192832 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 320-475 |
| Cow position: | chr13:20536724-20536564 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 320-482 |
| Cow position: | chr13:11096396-11096231 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 118, 73 |
| Conread position: | 320-500 |
| Cow position: | chr13:9246938-9246757 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 73 |
| Conread position: | 323-502 |
| Cow position: | chr13:9643664-9643854 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 324-475 |
| Cow position: | chr13:47356848-47356698 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 324-481 |
| Cow position: | chr13:21904882-21904721 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 72, 90 |
| Conread position: | 355-482 |
| Cow position: | chr13:14771650-14771512 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 38 |
Show alignments to all cow chromosomes.