Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 237-481 |
| Cow position: | chr14:33247073-33247319 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 249-475 |
| Cow position: | chr14:42918443-42918210 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 253-482 |
| Cow position: | chr14:28796022-28795788 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 145, 40 |
| Conread position: | 265-481 |
| Cow position: | chr14:14466147-14466362 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 147, 16 |
| Conread position: | 265-502 |
| Cow position: | chr14:13006840-13006595 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 272-502 |
| Cow position: | chr14:33773725-33773960 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 136, 34 |
| Conread position: | 280-502 |
| Cow position: | chr14:38143792-38144019 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 281-481 |
| Cow position: | chr14:25385571-25385771 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 130, 48 |
| Conread position: | 287-481 |
| Cow position: | chr14:7270701-7270893 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 113, 125 |
| Conread position: | 292-438 |
| Cow position: | chr14:41749456-41749599 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-442 |
| Cow position: | chr14:7647730-7647882 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 292-469 |
| Cow position: | chr14:12856902-12856726 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 131, 8 |
| Conread position: | 292-473 |
| Cow position: | chr14:13385681-13385491 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 292-473 |
| Cow position: | chr14:35650898-35651082 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 292-481 |
| Cow position: | chr14:106267-106462 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 292-481 |
| Cow position: | chr14:3564581-3564396 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 292-481 |
| Cow position: | chr14:19222187-19221996 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-481 |
| Cow position: | chr14:24992120-24991937 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 159 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 292-482 |
| Cow position: | chr14:19618458-19618637 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-482 |
| Cow position: | chr14:37108603-37108794 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 292-502 |
| Cow position: | chr14:7960068-7959867 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 147, 14 |
| Conread position: | 292-502 |
| Cow position: | chr14:11748614-11748820 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 292-502 |
| Cow position: | chr14:33538621-33538833 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 292-502 |
| Cow position: | chr14:33828457-33828250 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-502 |
| Cow position: | chr14:38379328-38379112 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 292-502 |
| Cow position: | chr14:44382892-44383114 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 100, 11 |
| Conread position: | 293-482 |
| Cow position: | chr14:20600688-20600499 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 293-502 |
| Cow position: | chr14:11507936-11508155 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 293-502 |
| Cow position: | chr14:15518072-15518290 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 293-502 |
| Cow position: | chr14:35381895-35381680 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 294-481 |
| Cow position: | chr14:12249891-12250082 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 294-481 |
| Cow position: | chr14:19863135-19863318 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 143, 12 |
| Conread position: | 298-469 |
| Cow position: | chr14:34329357-34329527 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 157, 7 |
| Conread position: | 298-481 |
| Cow position: | chr14:14280719-14280527 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 120, 8 |
| Conread position: | 298-481 |
| Cow position: | chr14:34330841-34330659 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 157, 7 |
| Conread position: | 298-481 |
| Cow position: | chr14:41128192-41128009 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 298-498 |
| Cow position: | chr14:4991293-4991099 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 123, 7 |
| Conread position: | 298-502 |
| Cow position: | chr14:4649714-4649920 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 124, 8 |
| Conread position: | 302-473 |
| Cow position: | chr14:47609288-47609466 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 27 |
| Conread position: | 308-473 |
| Cow position: | chr14:20320808-20320968 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 145, 85 |
| Conread position: | 308-481 |
| Cow position: | chr14:15033050-15032876 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 308-481 |
| Cow position: | chr14:27312718-27312541 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 117, 64 |
| Conread position: | 309-481 |
| Cow position: | chr14:12613810-12613979 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 145, 14 |
| Conread position: | 310-493 |
| Cow position: | chr14:39302071-39302261 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 181 |
| Conread position: | 313-502 |
| Cow position: | chr14:8006049-8006237 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 141, 36 |
| Conread position: | 319-502 |
| Cow position: | chr14:21230317-21230139 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 322-473 |
| Cow position: | chr14:24981734-24981577 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 82, 62 |
| Conread position: | 322-475 |
| Cow position: | chr14:17899764-17899607 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 73, 90 |
| Conread position: | 322-481 |
| Cow position: | chr14:48689808-48689640 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 322-502 |
| Cow position: | chr14:19129791-19129599 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 80, 71 |
| Conread position: | 327-471 |
| Cow position: | chr14:47036525-47036674 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 48 |
| Conread position: | 337-481 |
| Cow position: | chr14:24839913-24840061 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 344-475 |
| Cow position: | chr14:20384723-20384864 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 53 |
Show alignments to all cow chromosomes.