Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 239-455 |
| Cow position: | chr15:40343654-40343448 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 253-502 |
| Cow position: | chr15:6331663-6331901 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 277-481 |
| Cow position: | chr15:9062225-9062435 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 132, 29 |
| Conread position: | 277-481 |
| Cow position: | chr15:45217193-45216982 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 157 |
| Conread position: | 277-482 |
| Cow position: | chr15:34104637-34104431 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 278-481 |
| Cow position: | chr15:12316292-12316088 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 145, 28 |
| Conread position: | 280-445 |
| Cow position: | chr15:37039940-37040101 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 288-475 |
| Cow position: | chr15:23775601-23775783 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 165, 76 |
| Conread position: | 292-473 |
| Cow position: | chr15:18284595-18284406 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 292-473 |
| Cow position: | chr15:30800236-30800050 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 292-475 |
| Cow position: | chr15:15041080-15041267 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 292-475 |
| Cow position: | chr15:23703127-23702942 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-477 |
| Cow position: | chr15:34284004-34284195 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 292-479 |
| Cow position: | chr15:40138-39948 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 292-481 |
| Cow position: | chr15:20370113-20370295 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-481 |
| Cow position: | chr15:36621772-36621574 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 292-502 |
| Cow position: | chr15:16583358-16583561 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 292-502 |
| Cow position: | chr15:20534096-20534307 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 67, 11 |
| Conread position: | 292-502 |
| Cow position: | chr15:24038056-24038262 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 292-502 |
| Cow position: | chr15:27281216-27281004 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 293-444 |
| Cow position: | chr15:29542350-29542196 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 293-475 |
| Cow position: | chr15:9267711-9267885 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 294-470 |
| Cow position: | chr15:25666871-25667051 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 129, 12 |
| Conread position: | 294-477 |
| Cow position: | chr15:52197962-52198138 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 294-481 |
| Cow position: | chr15:23767913-23768103 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 294-481 |
| Cow position: | chr15:33976341-33976527 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 117, 12 |
| Conread position: | 296-481 |
| Cow position: | chr15:11362832-11363016 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 115, 10 |
| Conread position: | 297-480 |
| Cow position: | chr15:23798170-23798367 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 298-475 |
| Cow position: | chr15:11011261-11011437 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 308-453 |
| Cow position: | chr15:8230240-8230383 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 308-473 |
| Cow position: | chr15:35642360-35642188 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 308-478 |
| Cow position: | chr15:3572364-3572531 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 91, 104 |
| Conread position: | 308-480 |
| Cow position: | chr15:39621678-39621503 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 104, 80 |
| Conread position: | 308-480 |
| Cow position: | chr15:47822140-47821972 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 308-481 |
| Cow position: | chr15:17100376-17100549 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 308-481 |
| Cow position: | chr15:29810449-29810279 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 308-482 |
| Cow position: | chr15:39599780-39599602 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 87, 134 |
| Conread position: | 308-502 |
| Cow position: | chr15:39406074-39405874 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 309-472 |
| Cow position: | chr15:10245670-10245834 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 95, 24 |
| Conread position: | 319-481 |
| Cow position: | chr15:17233523-17233353 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 319-501 |
| Cow position: | chr15:21421270-21421076 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 320-481 |
| Cow position: | chr15:4501308-4501138 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 320-481 |
| Cow position: | chr15:36782004-36782166 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 88, 73 |
| Conread position: | 325-481 |
| Cow position: | chr15:33243481-33243307 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 325-502 |
| Cow position: | chr15:20352157-20351967 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 124 |
| Conread position: | 345-473 |
| Cow position: | chr15:37777654-37777526 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 109, 11 |
| Conread position: | 355-502 |
| Cow position: | chr15:2968626-2968474 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 364-481 |
| Cow position: | chr15:5044171-5044293 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 29 |
Show alignments to all cow chromosomes.