Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 239-482 |
| Cow position: | chr16:43308882-43308633 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 70 |
| Conread position: | 277-467 |
| Cow position: | chr16:41590501-41590687 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 277-476 |
| Cow position: | chr16:44688561-44688357 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 277-482 |
| Cow position: | chr16:17745553-17745762 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 278-481 |
| Cow position: | chr16:42092656-42092456 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 278-481 |
| Cow position: | chr16:42339921-42340123 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 52, 118 |
| Conread position: | 278-502 |
| Cow position: | chr16:13307145-13306915 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 281-502 |
| Cow position: | chr16:11008072-11008296 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 127, 16 |
| Conread position: | 283-477 |
| Cow position: | chr16:15805708-15805903 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 23 |
| Conread position: | 288-502 |
| Cow position: | chr16:53627694-53627475 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 107, 124 |
| Conread position: | 291-482 |
| Cow position: | chr16:42242384-42242187 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 105, 15 |
| Conread position: | 291-498 |
| Cow position: | chr16:22804847-22804650 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 167, 15 |
| Conread position: | 291-502 |
| Cow position: | chr16:23033603-23033800 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 292-455 |
| Cow position: | chr16:15255216-15255055 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-472 |
| Cow position: | chr16:4103423-4103240 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 292-473 |
| Cow position: | chr16:18693395-18693214 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 292-473 |
| Cow position: | chr16:28191802-28191988 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-473 |
| Cow position: | chr16:29766079-29766257 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 292-473 |
| Cow position: | chr16:49230038-49229853 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 292-475 |
| Cow position: | chr16:7542026-7542208 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 292-481 |
| Cow position: | chr16:5726664-5726850 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 292-481 |
| Cow position: | chr16:7078003-7077817 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-481 |
| Cow position: | chr16:8438892-8438709 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 292-481 |
| Cow position: | chr16:14758474-14758661 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 292-481 |
| Cow position: | chr16:17142673-17142866 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-481 |
| Cow position: | chr16:29158867-29159059 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-481 |
| Cow position: | chr16:40561961-40562158 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 292-481 |
| Cow position: | chr16:47662448-47662641 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 292-481 |
| Cow position: | chr16:49141823-49141637 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-493 |
| Cow position: | chr16:47820306-47820511 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 14 |
| Conread position: | 292-493 |
| Cow position: | chr16:53086589-53086390 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr16:4712636-4712854 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 292-502 |
| Cow position: | chr16:10040104-10039892 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 292-502 |
| Cow position: | chr16:15726626-15726419 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 124, 13 |
| Conread position: | 292-502 |
| Cow position: | chr16:53613034-53613256 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 292-503 |
| Cow position: | chr16:590174-589963 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 293-473 |
| Cow position: | chr16:48340958-48340777 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 293-475 |
| Cow position: | chr16:39616480-39616664 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 127, 13 |
| Conread position: | 293-482 |
| Cow position: | chr16:11103090-11102894 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 293-501 |
| Cow position: | chr16:3614484-3614697 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 294-475 |
| Cow position: | chr16:37380004-37380190 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 294-481 |
| Cow position: | chr16:1549137-1548947 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 107, 12 |
| Conread position: | 294-481 |
| Cow position: | chr16:42253833-42253638 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 294-502 |
| Cow position: | chr16:8026106-8025897 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 295-502 |
| Cow position: | chr16:2223669-2223449 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 100, 11 |
| Conread position: | 296-473 |
| Cow position: | chr16:7082994-7082814 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 122, 16 |
| Conread position: | 296-475 |
| Cow position: | chr16:7665371-7665558 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 99, 9 |
| Conread position: | 296-502 |
| Cow position: | chr16:3246453-3246254 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 297-481 |
| Cow position: | chr16:49125780-49125601 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 298-481 |
| Cow position: | chr16:53225064-53224886 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 156, 13 |
| Conread position: | 299-475 |
| Cow position: | chr16:32586941-32587119 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 124, 7 |
| Conread position: | 303-481 |
| Cow position: | chr16:27262202-27262024 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 86 |
| Conread position: | 308-453 |
| Cow position: | chr16:30909182-30909029 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 308-471 |
| Cow position: | chr16:19408764-19408599 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 308-481 |
| Cow position: | chr16:4979565-4979735 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 22 |
| Conread position: | 308-481 |
| Cow position: | chr16:14242124-14242298 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 308-502 |
| Cow position: | chr16:48145650-48145450 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 132, 68 |
| Conread position: | 309-453 |
| Cow position: | chr16:18574135-18574287 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 94, 84 |
| Conread position: | 309-481 |
| Cow position: | chr16:11615478-11615305 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 86, 103 |
| Conread position: | 309-502 |
| Cow position: | chr16:13969629-13969419 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 99, 84 |
| Conread position: | 310-473 |
| Cow position: | chr16:23472501-23472667 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 84 |
| Conread position: | 319-475 |
| Cow position: | chr16:47336490-47336653 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 104, 74 |
| Conread position: | 320-493 |
| Cow position: | chr16:45046389-45046566 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 100, 77 |
| Conread position: | 327-502 |
| Cow position: | chr16:51531205-51531015 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 330-499 |
| Cow position: | chr16:27249180-27249356 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 334-472 |
| Cow position: | chr16:12361197-12361058 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 77, 61 |
| Conread position: | 334-502 |
| Cow position: | chr16:31159803-31159619 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 337-473 |
| Cow position: | chr16:28396317-28396177 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 343-481 |
| Cow position: | chr16:50382986-50383129 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 358-482 |
| Cow position: | chr16:42752659-42752781 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 358-502 |
| Cow position: | chr16:15954361-15954220 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 35 |
Show alignments to all cow chromosomes.