Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 261-481 |
| Cow position: | chr17:7760714-7760497 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 27 |
| Conread position: | 262-453 |
| Cow position: | chr17:7423698-7423502 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 277-484 |
| Cow position: | chr17:37773771-37773568 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 280-453 |
| Cow position: | chr17:20055431-20055609 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 280-482 |
| Cow position: | chr17:33933968-33933779 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 174, 16 |
| Conread position: | 288-482 |
| Cow position: | chr17:24077176-24077373 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 126, 18 |
| Conread position: | 292-456 |
| Cow position: | chr17:40802588-40802743 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-472 |
| Cow position: | chr17:36533437-36533616 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 292-473 |
| Cow position: | chr17:25542036-25541859 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 292-475 |
| Cow position: | chr17:1359021-1358838 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 292-475 |
| Cow position: | chr17:6566249-6566430 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 292-480 |
| Cow position: | chr17:23337238-23337049 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 292-481 |
| Cow position: | chr17:1295795-1295601 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-481 |
| Cow position: | chr17:5041900-5041713 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 292-481 |
| Cow position: | chr17:40771606-40771805 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-481 |
| Cow position: | chr17:42347445-42347257 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 129, 19 |
| Conread position: | 292-482 |
| Cow position: | chr17:20126397-20126582 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 292-482 |
| Cow position: | chr17:40312501-40312696 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 292-494 |
| Cow position: | chr17:34079322-34079120 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 167 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 131, 16 |
| Conread position: | 292-502 |
| Cow position: | chr17:923656-923871 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 14 |
| Conread position: | 292-502 |
| Cow position: | chr17:15132942-15133142 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr17:30529760-30529548 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 293-481 |
| Cow position: | chr17:8544087-8544276 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 125, 13 |
| Conread position: | 293-481 |
| Cow position: | chr17:13244249-13244072 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 293-502 |
| Cow position: | chr17:30665051-30665265 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 294-473 |
| Cow position: | chr17:34948418-34948599 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 294-481 |
| Cow position: | chr17:18495731-18495552 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 144, 18 |
| Conread position: | 294-481 |
| Cow position: | chr17:20780290-20780479 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 295-473 |
| Cow position: | chr17:44924396-44924226 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 159, 11 |
| Conread position: | 295-502 |
| Cow position: | chr17:14848744-14848550 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 296-502 |
| Cow position: | chr17:34316928-34316715 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 298-481 |
| Cow position: | chr17:9778033-9778216 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 157, 8 |
| Conread position: | 308-473 |
| Cow position: | chr17:3471211-3471381 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 112, 76 |
| Conread position: | 308-481 |
| Cow position: | chr17:25078203-25078033 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 96, 31 |
| Conread position: | 308-481 |
| Cow position: | chr17:36746528-36746361 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 308-482 |
| Cow position: | chr17:966949-966769 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 112, 89 |
| Conread position: | 308-482 |
| Cow position: | chr17:40741437-40741618 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 308-502 |
| Cow position: | chr17:11361973-11362173 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 107, 70 |
| Conread position: | 308-502 |
| Cow position: | chr17:21739094-21738882 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 309-480 |
| Cow position: | chr17:38646859-38647027 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 309-481 |
| Cow position: | chr17:21710296-21710474 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 311-471 |
| Cow position: | chr17:21323090-21323251 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 112, 56 |
| Conread position: | 311-482 |
| Cow position: | chr17:33052656-33052829 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 311-490 |
| Cow position: | chr17:15067830-15067654 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 112, 20 |
| Conread position: | 312-471 |
| Cow position: | chr17:20912692-20912851 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 143, 17 |
| Conread position: | 312-482 |
| Cow position: | chr17:24761432-24761258 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 83, 130 |
| Conread position: | 319-481 |
| Cow position: | chr17:12059289-12059126 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 320-501 |
| Cow position: | chr17:22563985-22564174 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 100, 67 |
| Conread position: | 322-502 |
| Cow position: | chr17:35311225-35311420 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 323-475 |
| Cow position: | chr17:41892263-41892103 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 323-481 |
| Cow position: | chr17:21207330-21207164 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 72, 125 |
| Conread position: | 324-482 |
| Cow position: | chr17:21312999-21312841 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 130, 69 |
| Conread position: | 325-453 |
| Cow position: | chr17:20337596-20337728 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 325-502 |
| Cow position: | chr17:37480186-37479999 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 353-502 |
| Cow position: | chr17:17683063-17682908 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 361-481 |
| Cow position: | chr17:18146025-18146153 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 368-471 |
| Cow position: | chr17:25334301-25334405 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 25 |
Show alignments to all cow chromosomes.