Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 253-502 |
| Cow position: | chr19:27180576-27180321 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 264-475 |
| Cow position: | chr19:17479267-17479054 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 267-481 |
| Cow position: | chr19:25851791-25851568 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 137, 129 |
| Conread position: | 277-481 |
| Cow position: | chr19:21065486-21065682 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 277-482 |
| Cow position: | chr19:8212134-8211918 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 277-502 |
| Cow position: | chr19:30925608-30925380 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 163, 25 |
| Conread position: | 280-481 |
| Cow position: | chr19:38340265-38340063 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 289-481 |
| Cow position: | chr19:54294862-54294672 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 116, 17 |
| Conread position: | 292-451 |
| Cow position: | chr19:21115031-21115192 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-454 |
| Cow position: | chr19:36461802-36461640 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 122, 14 |
| Conread position: | 292-473 |
| Cow position: | chr19:18015981-18015810 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 151, 14 |
| Conread position: | 292-476 |
| Cow position: | chr19:4195453-4195639 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 115, 14 |
| Conread position: | 292-478 |
| Cow position: | chr19:35064460-35064282 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-480 |
| Cow position: | chr19:39245624-39245816 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-481 |
| Cow position: | chr19:1355337-1355518 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 151, 13 |
| Conread position: | 292-481 |
| Cow position: | chr19:10171724-10171919 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 292-481 |
| Cow position: | chr19:24358499-24358313 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-481 |
| Cow position: | chr19:33932417-33932232 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 292-482 |
| Cow position: | chr19:24062021-24062209 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-500 |
| Cow position: | chr19:20622386-20622593 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 148, 14 |
| Conread position: | 292-500 |
| Cow position: | chr19:27104474-27104677 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-502 |
| Cow position: | chr19:4537688-4537475 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr19:19561228-19561453 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 292-502 |
| Cow position: | chr19:21092504-21092705 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 184, 14 |
| Conread position: | 292-502 |
| Cow position: | chr19:31846818-31846609 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 174 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 295-475 |
| Cow position: | chr19:50562413-50562585 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 158, 11 |
| Conread position: | 298-502 |
| Cow position: | chr19:40051655-40051450 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 299-481 |
| Cow position: | chr19:10545977-10545790 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 7 |
| Conread position: | 308-478 |
| Cow position: | chr19:35076749-35076585 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 308-480 |
| Cow position: | chr19:38638063-38637890 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 148 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 69, 86 |
| Conread position: | 308-480 |
| Cow position: | chr19:48474881-48475059 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 308-481 |
| Cow position: | chr19:990671-990503 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 308-481 |
| Cow position: | chr19:16694309-16694126 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 70, 21 |
| Conread position: | 308-482 |
| Cow position: | chr19:8128054-8128239 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 308-482 |
| Cow position: | chr19:39661806-39661624 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 101, 85 |
| Conread position: | 308-482 |
| Cow position: | chr19:53372158-53371980 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 112, 85 |
| Conread position: | 308-502 |
| Cow position: | chr19:19430969-19431171 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 309-475 |
| Cow position: | chr19:55784719-55784887 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 100, 84 |
| Conread position: | 309-481 |
| Cow position: | chr19:10093034-10093210 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 312-480 |
| Cow position: | chr19:21378724-21378554 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 314-502 |
| Cow position: | chr19:37562248-37562065 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 62 |
| Conread position: | 319-481 |
| Cow position: | chr19:25852083-25851912 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 319-481 |
| Cow position: | chr19:25865175-25865004 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 319-502 |
| Cow position: | chr19:53953895-53953719 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 136, 77 |
| Conread position: | 320-480 |
| Cow position: | chr19:44125398-44125559 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 320-482 |
| Cow position: | chr19:32450828-32450998 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 323-473 |
| Cow position: | chr19:48409268-48409419 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 89 |
| Conread position: | 325-481 |
| Cow position: | chr19:30471582-30471427 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 63 |
| Conread position: | 333-480 |
| Cow position: | chr19:6531654-6531805 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 90, 60 |
| Conread position: | 348-452 |
| Cow position: | chr19:42886600-42886702 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 350-481 |
| Cow position: | chr19:24137038-24137178 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.