Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 255-475 |
| Cow position: | chr2:11599135-11599359 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 270-473 |
| Cow position: | chr2:45535182-45535384 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 144, 64 |
| Conread position: | 274-475 |
| Cow position: | chr2:28257193-28257386 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 176, 28 |
| Conread position: | 277-502 |
| Cow position: | chr2:13467417-13467649 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 278-476 |
| Cow position: | chr2:17800239-17800442 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 280-481 |
| Cow position: | chr2:6282287-6282085 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 282-475 |
| Cow position: | chr2:4223541-4223339 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 288-481 |
| Cow position: | chr2:25282839-25283041 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 122, 18 |
| Conread position: | 288-481 |
| Cow position: | chr2:56102736-56102536 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 288-502 |
| Cow position: | chr2:10656107-10655906 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 291-481 |
| Cow position: | chr2:43835829-43835633 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 292-438 |
| Cow position: | chr2:15693966-15694112 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-438 |
| Cow position: | chr2:47877715-47877859 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 292-469 |
| Cow position: | chr2:52332894-52332721 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 120, 14 |
| Conread position: | 292-471 |
| Cow position: | chr2:31355443-31355627 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-473 |
| Cow position: | chr2:80325112-80324933 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-481 |
| Cow position: | chr2:485355-485547 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 112, 13 |
| Conread position: | 292-481 |
| Cow position: | chr2:4922385-4922196 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 292-481 |
| Cow position: | chr2:6883963-6884152 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 292-481 |
| Cow position: | chr2:21416050-21416233 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 147, 8 |
| Conread position: | 292-481 |
| Cow position: | chr2:21644717-21644522 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 292-481 |
| Cow position: | chr2:23493270-23493466 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 292-481 |
| Cow position: | chr2:24469921-24469734 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-481 |
| Cow position: | chr2:26501204-26501004 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 292-481 |
| Cow position: | chr2:42607807-42607994 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-481 |
| Cow position: | chr2:44081185-44081363 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-481 |
| Cow position: | chr2:46294299-46294110 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 122, 26 |
| Conread position: | 292-481 |
| Cow position: | chr2:71921961-71922156 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 103, 21 |
| Conread position: | 292-481 |
| Cow position: | chr2:76314119-76313939 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-482 |
| Cow position: | chr2:17940550-17940357 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-482 |
| Cow position: | chr2:36997889-36998088 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 166 |
| Conread position: | 292-501 |
| Cow position: | chr2:26555851-26555635 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr2:14826020-14826238 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 103, 17 |
| Conread position: | 292-503 |
| Cow position: | chr2:840895-841119 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 293-475 |
| Cow position: | chr2:1352374-1352193 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 293-475 |
| Cow position: | chr2:77359227-77359404 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 293-481 |
| Cow position: | chr2:45439192-45439369 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 162, 13 |
| Conread position: | 293-481 |
| Cow position: | chr2:68084251-68084442 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 293-502 |
| Cow position: | chr2:80115844-80116051 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 294-482 |
| Cow position: | chr2:39385125-39384942 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 159, 12 |
| Conread position: | 294-502 |
| Cow position: | chr2:45469742-45469960 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 106, 14 |
| Conread position: | 295-471 |
| Cow position: | chr2:46262183-46262365 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 10 |
| Conread position: | 296-481 |
| Cow position: | chr2:21407660-21407849 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 127, 10 |
| Conread position: | 296-481 |
| Cow position: | chr2:27613286-27613093 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 296-502 |
| Cow position: | chr2:13726155-13725956 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 298-473 |
| Cow position: | chr2:37113456-37113284 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 127, 10 |
| Conread position: | 299-473 |
| Cow position: | chr2:80178020-80177841 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 124, 7 |
| Conread position: | 300-502 |
| Cow position: | chr2:32403219-32403020 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 154, 6 |
| Conread position: | 305-482 |
| Cow position: | chr2:81927602-81927783 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 308-454 |
| Cow position: | chr2:53501507-53501364 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 308-473 |
| Cow position: | chr2:67301786-67301950 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 308-481 |
| Cow position: | chr2:47990190-47990364 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 21 |
| Conread position: | 308-502 |
| Cow position: | chr2:11696880-11697081 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 181 |
| Conread position: | 309-504 |
| Cow position: | chr2:44551083-44550887 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 114, 55 |
| Conread position: | 319-473 |
| Cow position: | chr2:54253114-54253271 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 319-475 |
| Cow position: | chr2:9687815-9687649 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 92, 76 |
| Conread position: | 320-502 |
| Cow position: | chr2:39489546-39489732 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 96, 73 |
| Conread position: | 323-472 |
| Cow position: | chr2:85246566-85246410 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 323-473 |
| Cow position: | chr2:78116578-78116427 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 130, 117 |
| Conread position: | 323-481 |
| Cow position: | chr2:15329167-15329321 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 72 |
| Conread position: | 323-481 |
| Cow position: | chr2:50565691-50565856 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 91, 72 |
| Conread position: | 327-482 |
| Cow position: | chr2:46020674-46020835 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 63 |
| Conread position: | 330-482 |
| Cow position: | chr2:80275520-80275364 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 334-481 |
| Cow position: | chr2:15597694-15597546 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 41 |
| Conread position: | 334-481 |
| Cow position: | chr2:32408707-32408562 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 120, 59 |
| Conread position: | 334-481 |
| Cow position: | chr2:60463040-60462892 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 59 |
| Conread position: | 334-481 |
| Cow position: | chr2:60468419-60468271 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 59 |
| Conread position: | 334-481 |
| Cow position: | chr2:79403876-79404030 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 82, 62 |
| Conread position: | 340-481 |
| Cow position: | chr2:6232399-6232541 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 114, 53 |
| Conread position: | 344-500 |
| Cow position: | chr2:26157927-26157760 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 347-475 |
| Cow position: | chr2:16564472-16564610 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 350-473 |
| Cow position: | chr2:23301539-23301670 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 362-502 |
| Cow position: | chr2:5130645-5130502 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 56, 34 |
Show alignments to all cow chromosomes.