Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 253-475 |
| Cow position: | chr20:21019299-21019529 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 21, 134 |
| Conread position: | 277-481 |
| Cow position: | chr20:8910687-8910890 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 123, 29 |
| Conread position: | 287-453 |
| Cow position: | chr20:4893124-4892962 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 288-502 |
| Cow position: | chr20:17734001-17733779 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 110, 42 |
| Conread position: | 292-458 |
| Cow position: | chr20:35145785-35145959 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 292-473 |
| Cow position: | chr20:4945467-4945283 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 292-475 |
| Cow position: | chr20:581144-580958 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 292-475 |
| Cow position: | chr20:4781338-4781530 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 292-478 |
| Cow position: | chr20:3658919-3658733 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 292-481 |
| Cow position: | chr20:5998888-5998702 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 292-481 |
| Cow position: | chr20:9433380-9433556 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 292-481 |
| Cow position: | chr20:12334160-12334345 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 292-481 |
| Cow position: | chr20:17903934-17904130 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 292-481 |
| Cow position: | chr20:26076863-26077051 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-481 |
| Cow position: | chr20:39418116-39417927 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 292-481 |
| Cow position: | chr20:40781751-40781938 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 293-444 |
| Cow position: | chr20:14718961-14718809 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 114, 13 |
| Conread position: | 293-477 |
| Cow position: | chr20:23936635-23936441 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 294-481 |
| Cow position: | chr20:24398852-24398664 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 149, 17 |
| Conread position: | 294-481 |
| Cow position: | chr20:40511977-40511788 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 294-482 |
| Cow position: | chr20:21714531-21714727 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 296-482 |
| Cow position: | chr20:20312955-20312775 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 159, 9 |
| Conread position: | 297-482 |
| Cow position: | chr20:31069425-31069609 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 298-475 |
| Cow position: | chr20:5025518-5025340 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 152 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 142, 8 |
| Conread position: | 308-461 |
| Cow position: | chr20:12839849-12840007 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 85, 15 |
| Conread position: | 308-464 |
| Cow position: | chr20:22850954-22851104 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 62 |
| Conread position: | 308-473 |
| Cow position: | chr20:23065040-23064868 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 308-473 |
| Cow position: | chr20:24902680-24902500 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 147 |
| Conread position: | 308-475 |
| Cow position: | chr20:11923448-11923278 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 105 |
| Conread position: | 308-502 |
| Cow position: | chr20:20983799-20983992 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 82 |
| Conread position: | 309-454 |
| Cow position: | chr20:3426950-3427094 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 310-502 |
| Cow position: | chr20:22007298-22007496 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 85, 102 |
| Conread position: | 311-471 |
| Cow position: | chr20:16497052-16496899 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 313-481 |
| Cow position: | chr20:15566034-15565855 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 320-475 |
| Cow position: | chr20:34098154-34097994 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 103, 75 |
| Conread position: | 320-482 |
| Cow position: | chr20:26469261-26469092 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 97, 73 |
| Conread position: | 323-481 |
| Cow position: | chr20:11542476-11542313 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 67, 120 |
| Conread position: | 325-481 |
| Cow position: | chr20:13994618-13994784 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 70, 123 |
| Conread position: | 355-502 |
| Cow position: | chr20:12048235-12048389 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 359-502 |
| Cow position: | chr20:20241943-20242086 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 364-475 |
| Cow position: | chr20:5025095-5024981 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 27 |
Show alignments to all cow chromosomes.