Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 254-473 |
| Cow position: | chr28:13371470-13371248 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 254-481 |
| Cow position: | chr28:8787248-8787472 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 273-481 |
| Cow position: | chr28:30978001-30978206 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 277-502 |
| Cow position: | chr28:24996863-24996631 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 278-473 |
| Cow position: | chr28:19222871-19222671 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 280-473 |
| Cow position: | chr28:16879542-16879352 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 281-471 |
| Cow position: | chr28:16450967-16450780 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 286-481 |
| Cow position: | chr28:26103451-26103641 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 173, 16 |
| Conread position: | 286-482 |
| Cow position: | chr28:25249091-25249287 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 137, 7 |
| Conread position: | 288-494 |
| Cow position: | chr28:11786971-11786767 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 292-454 |
| Cow position: | chr28:23802395-23802554 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-464 |
| Cow position: | chr28:13356844-13356672 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-475 |
| Cow position: | chr28:4188267-4188456 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 292-475 |
| Cow position: | chr28:9426601-9426425 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 292-475 |
| Cow position: | chr28:26784726-26784538 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-481 |
| Cow position: | chr28:10682077-10681890 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 113, 14 |
| Conread position: | 292-481 |
| Cow position: | chr28:15272520-15272329 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 292-481 |
| Cow position: | chr28:21354965-21355156 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 292-481 |
| Cow position: | chr28:26269070-26269260 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 292-482 |
| Cow position: | chr28:16441128-16441317 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-501 |
| Cow position: | chr28:26743363-26743581 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 292-502 |
| Cow position: | chr28:30293849-30293628 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 293-483 |
| Cow position: | chr28:3161338-3161135 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 293-502 |
| Cow position: | chr28:31110263-31110046 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 124, 13 |
| Conread position: | 294-444 |
| Cow position: | chr28:15601007-15601155 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 294-469 |
| Cow position: | chr28:6307635-6307812 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 308-447 |
| Cow position: | chr28:23155706-23155844 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 133, 70 |
| Conread position: | 308-480 |
| Cow position: | chr28:16386751-16386576 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 104 |
| Conread position: | 308-481 |
| Cow position: | chr28:22170963-22170783 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 112, 85 |
| Conread position: | 308-498 |
| Cow position: | chr28:29953093-29952897 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 309-481 |
| Cow position: | chr28:23793545-23793372 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 107, 20 |
| Conread position: | 311-475 |
| Cow position: | chr28:9294771-9294941 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 312-469 |
| Cow position: | chr28:4938597-4938754 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 100 |
| Conread position: | 312-498 |
| Cow position: | chr28:10529724-10529536 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 81 |
| Conread position: | 319-473 |
| Cow position: | chr28:34082256-34082092 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 319-481 |
| Cow position: | chr28:5658320-5658484 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 95, 10 |
| Conread position: | 320-451 |
| Cow position: | chr28:34844483-34844358 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 324-502 |
| Cow position: | chr28:25282976-25283159 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 334-502 |
| Cow position: | chr28:10478562-10478385 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 362-501 |
| Cow position: | chr28:10999860-10999723 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 31 |
Show alignments to all cow chromosomes.