Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 27-284 |
| Cow position: | chr3:17967603-17967360 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 272-453 |
| Cow position: | chr3:12286923-12287108 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 277-481 |
| Cow position: | chr3:23876696-23876899 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 135, 16 |
| Conread position: | 277-482 |
| Cow position: | chr3:16004291-16004085 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 277-482 |
| Cow position: | chr3:66964598-66964395 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 287-475 |
| Cow position: | chr3:62611619-62611804 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 179, 18 |
| Conread position: | 288-502 |
| Cow position: | chr3:70401609-70401830 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 135, 41 |
| Conread position: | 289-477 |
| Cow position: | chr3:7678382-7678568 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 122, 22 |
| Conread position: | 291-502 |
| Cow position: | chr3:14801463-14801670 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 7 |
| Conread position: | 292-453 |
| Cow position: | chr3:68303038-68303208 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 101 |
| Conread position: | 292-453 |
| Cow position: | chr3:68514837-68514686 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-467 |
| Cow position: | chr3:12670981-12670806 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 292-471 |
| Cow position: | chr3:73961969-73961786 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 120 |
| Conread position: | 292-473 |
| Cow position: | chr3:4457364-4457177 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 112, 13 |
| Conread position: | 292-473 |
| Cow position: | chr3:8147951-8147772 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 292-473 |
| Cow position: | chr3:11987042-11987224 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-475 |
| Cow position: | chr3:2483165-2483344 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 292-475 |
| Cow position: | chr3:16752535-16752356 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 115, 14 |
| Conread position: | 292-480 |
| Cow position: | chr3:66375033-66375219 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-481 |
| Cow position: | chr3:2024896-2025090 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 292-481 |
| Cow position: | chr3:48252609-48252788 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 292-481 |
| Cow position: | chr3:57554135-57553947 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 292-481 |
| Cow position: | chr3:59514823-59515008 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-481 |
| Cow position: | chr3:62623921-62623745 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 292-482 |
| Cow position: | chr3:70468091-70467900 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 292-483 |
| Cow position: | chr3:2216072-2216271 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr3:30463454-30463241 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-502 |
| Cow position: | chr3:69849790-69849577 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 292-502 |
| Cow position: | chr3:79292546-79292758 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 293-481 |
| Cow position: | chr3:34270644-34270819 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 293-481 |
| Cow position: | chr3:49650093-49650290 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 293-481 |
| Cow position: | chr3:67161645-67161846 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 293-502 |
| Cow position: | chr3:17895567-17895771 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 162, 13 |
| Conread position: | 293-502 |
| Cow position: | chr3:76172949-76172735 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 294-475 |
| Cow position: | chr3:80740292-80740461 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 294-502 |
| Cow position: | chr3:64172159-64172369 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 11 |
| Conread position: | 295-494 |
| Cow position: | chr3:20471649-20471444 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 296-481 |
| Cow position: | chr3:18497741-18497925 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 146, 12 |
| Conread position: | 296-481 |
| Cow position: | chr3:59691620-59691802 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 296-481 |
| Cow position: | chr3:70333757-70333572 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 10 |
| Conread position: | 298-475 |
| Cow position: | chr3:65413557-65413382 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 118, 8 |
| Conread position: | 298-481 |
| Cow position: | chr3:56651-56473 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 155, 8 |
| Conread position: | 298-481 |
| Cow position: | chr3:17957185-17957369 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 299-473 |
| Cow position: | chr3:77365575-77365402 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 308-441 |
| Cow position: | chr3:79272062-79271934 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 308-468 |
| Cow position: | chr3:84368643-84368481 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 308-481 |
| Cow position: | chr3:83369048-83369221 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 92, 104 |
| Conread position: | 308-502 |
| Cow position: | chr3:28908469-28908275 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 72 |
| Conread position: | 308-502 |
| Cow position: | chr3:53046931-53046734 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 110, 90 |
| Conread position: | 309-475 |
| Cow position: | chr3:525081-525248 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 86, 103 |
| Conread position: | 309-481 |
| Cow position: | chr3:49731910-49731737 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 145, 20 |
| Conread position: | 310-481 |
| Cow position: | chr3:70899628-70899798 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 144, 83 |
| Conread position: | 319-469 |
| Cow position: | chr3:60597285-60597435 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 102, 59 |
| Conread position: | 319-502 |
| Cow position: | chr3:72018856-72019042 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 320-481 |
| Cow position: | chr3:18393646-18393484 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 75, 92 |
| Conread position: | 324-481 |
| Cow position: | chr3:28692688-28692528 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 71, 88 |
| Conread position: | 325-473 |
| Cow position: | chr3:61171767-61171609 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 66 |
| Conread position: | 325-502 |
| Cow position: | chr3:13577443-13577260 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 328-481 |
| Cow position: | chr3:41328201-41328352 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 126, 58 |
| Conread position: | 333-502 |
| Cow position: | chr3:44535016-44534831 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 333-502 |
| Cow position: | chr3:82359796-82359971 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 110 |
| Conread position: | 334-502 |
| Cow position: | chr3:58767031-58767188 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 336-502 |
| Cow position: | chr3:23445136-23444968 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 77 |
Show alignments to all cow chromosomes.