Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 229-473 |
| Cow position: | chr4:17052930-17052689 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 256-502 |
| Cow position: | chr4:5999501-5999247 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 266-441 |
| Cow position: | chr4:28094749-28094576 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 269-481 |
| Cow position: | chr4:8801207-8801421 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 270-475 |
| Cow position: | chr4:7249865-7249655 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 274-481 |
| Cow position: | chr4:51122767-51122976 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 140, 32 |
| Conread position: | 276-475 |
| Cow position: | chr4:17124581-17124382 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 277-473 |
| Cow position: | chr4:26400668-26400874 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 277-481 |
| Cow position: | chr4:47348544-47348747 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 277-502 |
| Cow position: | chr4:5461140-5460921 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 146, 31 |
| Conread position: | 277-502 |
| Cow position: | chr4:33395975-33395756 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 134, 31 |
| Conread position: | 278-475 |
| Cow position: | chr4:10412092-10412291 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 286-481 |
| Cow position: | chr4:36813095-36813293 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 128, 7 |
| Conread position: | 288-473 |
| Cow position: | chr4:30690446-30690633 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 288-501 |
| Cow position: | chr4:21064280-21064061 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 18 |
| Conread position: | 288-502 |
| Cow position: | chr4:23853926-23854135 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 289-481 |
| Cow position: | chr4:10055936-10056133 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 291-481 |
| Cow position: | chr4:29237423-29237238 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 120, 15 |
| Conread position: | 292-453 |
| Cow position: | chr4:55508689-55508525 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 131, 37 |
| Conread position: | 292-467 |
| Cow position: | chr4:40576188-40576017 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 292-473 |
| Cow position: | chr4:49629225-49629395 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 292-475 |
| Cow position: | chr4:7258699-7258510 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-475 |
| Cow position: | chr4:53208967-53209153 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 292-481 |
| Cow position: | chr4:6792170-6792358 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-481 |
| Cow position: | chr4:11671180-11671374 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 292-481 |
| Cow position: | chr4:11901835-11901641 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 292-481 |
| Cow position: | chr4:15635715-15635529 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 16 |
| Conread position: | 292-481 |
| Cow position: | chr4:21058657-21058463 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 292-481 |
| Cow position: | chr4:27276813-27276625 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-481 |
| Cow position: | chr4:45775613-45775420 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 141, 14 |
| Conread position: | 292-481 |
| Cow position: | chr4:51903330-51903524 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-482 |
| Cow position: | chr4:45738754-45738558 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 292-502 |
| Cow position: | chr4:61215270-61215052 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 293-471 |
| Cow position: | chr4:4736768-4736941 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 145, 13 |
| Conread position: | 293-501 |
| Cow position: | chr4:7704578-7704383 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 13 |
| Conread position: | 294-481 |
| Cow position: | chr4:42267012-42266832 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 160, 12 |
| Conread position: | 294-481 |
| Cow position: | chr4:56240115-56239935 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 295-482 |
| Cow position: | chr4:60897542-60897355 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 122, 11 |
| Conread position: | 295-502 |
| Cow position: | chr4:43543003-43542791 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 296-481 |
| Cow position: | chr4:43370118-43369932 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 104, 10 |
| Conread position: | 297-502 |
| Cow position: | chr4:54667958-54667743 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 107, 9 |
| Conread position: | 298-473 |
| Cow position: | chr4:44612737-44612916 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 127, 8 |
| Conread position: | 308-453 |
| Cow position: | chr4:46385836-46385683 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 308-473 |
| Cow position: | chr4:21371142-21371303 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 21 |
| Conread position: | 308-481 |
| Cow position: | chr4:34630644-34630813 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 146, 21 |
| Conread position: | 308-481 |
| Cow position: | chr4:58248150-58248321 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 308-500 |
| Cow position: | chr4:46456305-46456117 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 23 |
| Conread position: | 309-473 |
| Cow position: | chr4:16736246-16736420 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 311-452 |
| Cow position: | chr4:61066398-61066537 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 100, 80 |
| Conread position: | 312-481 |
| Cow position: | chr4:55395514-55395681 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 101, 79 |
| Conread position: | 317-502 |
| Cow position: | chr4:13043022-13043209 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 319-481 |
| Cow position: | chr4:19322326-19322162 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 142 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 92, 74 |
| Conread position: | 321-481 |
| Cow position: | chr4:41602604-41602769 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 322-473 |
| Cow position: | chr4:34383581-34383431 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 124, 65 |
| Conread position: | 325-481 |
| Cow position: | chr4:11004957-11004800 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 326-471 |
| Cow position: | chr4:20502414-20502556 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 337-502 |
| Cow position: | chr4:22860935-22860768 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 118, 59 |
| Conread position: | 352-502 |
| Cow position: | chr4:48321814-48321966 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 360-481 |
| Cow position: | chr4:51768906-51769031 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 33 |
Show alignments to all cow chromosomes.