Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 254-453 |
| Cow position: | chr6:28180232-28180033 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 54 |
| Conread position: | 254-473 |
| Cow position: | chr6:61631881-61631649 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 254-482 |
| Cow position: | chr6:11192720-11192499 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 263-453 |
| Cow position: | chr6:14063914-14063725 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 157, 68 |
| Conread position: | 277-502 |
| Cow position: | chr6:10612620-10612845 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 277-502 |
| Cow position: | chr6:66433708-66433934 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 167, 34 |
| Conread position: | 287-473 |
| Cow position: | chr6:9026288-9026472 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 7 |
| Conread position: | 287-473 |
| Cow position: | chr6:12387552-12387369 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 127, 19 |
| Conread position: | 287-481 |
| Cow position: | chr6:62925225-62925030 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 288-455 |
| Cow position: | chr6:1174732-1174559 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 288-470 |
| Cow position: | chr6:9733062-9732887 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 292-472 |
| Cow position: | chr6:25358852-25359032 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 292-473 |
| Cow position: | chr6:2607388-2607574 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-475 |
| Cow position: | chr6:7131096-7130923 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-475 |
| Cow position: | chr6:42961592-42961399 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 292-476 |
| Cow position: | chr6:40264422-40264238 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 112, 13 |
| Conread position: | 292-477 |
| Cow position: | chr6:67544517-67544333 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 161, 13 |
| Conread position: | 292-481 |
| Cow position: | chr6:3952300-3952485 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-481 |
| Cow position: | chr6:11169483-11169665 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 292-481 |
| Cow position: | chr6:14201473-14201668 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 106, 14 |
| Conread position: | 292-481 |
| Cow position: | chr6:20605709-20605903 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 292-481 |
| Cow position: | chr6:34251500-34251321 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 292-481 |
| Cow position: | chr6:37634565-37634751 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 292-481 |
| Cow position: | chr6:53710893-53711082 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-482 |
| Cow position: | chr6:5095775-5095579 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 119, 16 |
| Conread position: | 292-502 |
| Cow position: | chr6:20231050-20230836 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 152, 14 |
| Conread position: | 292-502 |
| Cow position: | chr6:35181478-35181268 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 293-456 |
| Cow position: | chr6:18049249-18049090 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 111, 12 |
| Conread position: | 293-475 |
| Cow position: | chr6:56842936-56843116 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 294-475 |
| Cow position: | chr6:44078299-44078478 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 298-493 |
| Cow position: | chr6:5462267-5462076 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 156, 8 |
| Conread position: | 298-501 |
| Cow position: | chr6:63272832-63272621 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 308-474 |
| Cow position: | chr6:47339560-47339393 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 308-481 |
| Cow position: | chr6:827917-827740 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 308-481 |
| Cow position: | chr6:28476971-28477145 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 105 |
| Conread position: | 308-502 |
| Cow position: | chr6:24515404-24515205 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 115, 87 |
| Conread position: | 309-479 |
| Cow position: | chr6:17248526-17248700 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 310-502 |
| Cow position: | chr6:24961936-24962134 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 159 |
| Conread position: | 311-482 |
| Cow position: | chr6:54864874-54864702 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 312-481 |
| Cow position: | chr6:61137158-61137341 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 319-470 |
| Cow position: | chr6:21231336-21231487 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 135, 74 |
| Conread position: | 319-501 |
| Cow position: | chr6:52025855-52025661 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 319-502 |
| Cow position: | chr6:14850915-14850722 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 320-467 |
| Cow position: | chr6:6201242-6201394 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 323-472 |
| Cow position: | chr6:36011499-36011648 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 333-502 |
| Cow position: | chr6:6226838-6227010 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 348-481 |
| Cow position: | chr6:27888176-27888317 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 125 |
| Conread position: | 358-475 |
| Cow position: | chr6:32987159-32987037 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 359-481 |
| Cow position: | chr6:55763694-55763822 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 58, 36 |
| Conread position: | 360-480 |
| Cow position: | chr6:48112045-48112164 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 373-502 |
| Cow position: | chr6:16316160-16316294 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 117 |
Show alignments to all cow chromosomes.