Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 252-473 |
| Cow position: | chr7:64573322-64573101 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 254-435 |
| Cow position: | chr7:44039229-44039410 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 254-472 |
| Cow position: | chr7:32824518-32824293 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 260-481 |
| Cow position: | chr7:30172322-30172117 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 217, 33 |
| Conread position: | 270-473 |
| Cow position: | chr7:54583435-54583636 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 275-489 |
| Cow position: | chr7:41551496-41551712 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 277-481 |
| Cow position: | chr7:24778351-24778146 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 283-481 |
| Cow position: | chr7:59168044-59168241 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 284-464 |
| Cow position: | chr7:40894289-40894479 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 287-456 |
| Cow position: | chr7:6270467-6270636 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 288-473 |
| Cow position: | chr7:49648134-49648326 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 288-475 |
| Cow position: | chr7:2172531-2172713 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 123, 7 |
| Conread position: | 288-502 |
| Cow position: | chr7:205527-205736 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 292-442 |
| Cow position: | chr7:57517668-57517816 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 292-453 |
| Cow position: | chr7:33633045-33632893 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 292-469 |
| Cow position: | chr7:66894763-66894581 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 292-473 |
| Cow position: | chr7:53034535-53034359 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 146, 16 |
| Conread position: | 292-473 |
| Cow position: | chr7:60120789-60120964 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 174, 14 |
| Conread position: | 292-475 |
| Cow position: | chr7:26911660-26911477 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 292-475 |
| Cow position: | chr7:29010614-29010431 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 292-475 |
| Cow position: | chr7:47503436-47503618 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-478 |
| Cow position: | chr7:268773-268961 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 292-479 |
| Cow position: | chr7:21240331-21240151 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-481 |
| Cow position: | chr7:600117-600304 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 8 |
| Conread position: | 292-481 |
| Cow position: | chr7:6706074-6706268 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-481 |
| Cow position: | chr7:25083469-25083664 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 292-481 |
| Cow position: | chr7:28090018-28090202 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-481 |
| Cow position: | chr7:36717684-36717493 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 292-481 |
| Cow position: | chr7:40189328-40189523 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 292-481 |
| Cow position: | chr7:53988838-53989023 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 292-482 |
| Cow position: | chr7:44049587-44049401 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 292-496 |
| Cow position: | chr7:17967341-17967136 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 292-499 |
| Cow position: | chr7:35779227-35779442 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 108, 14 |
| Conread position: | 292-500 |
| Cow position: | chr7:37142587-37142376 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 292-501 |
| Cow position: | chr7:45157910-45158114 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 292-502 |
| Cow position: | chr7:41293970-41293753 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 292-502 |
| Cow position: | chr7:52776976-52776762 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 125, 13 |
| Conread position: | 292-502 |
| Cow position: | chr7:63968424-63968223 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 160, 14 |
| Conread position: | 293-477 |
| Cow position: | chr7:44590068-44589885 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 293-482 |
| Cow position: | chr7:45592818-45593010 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 293-502 |
| Cow position: | chr7:8813148-8812932 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 121, 13 |
| Conread position: | 295-449 |
| Cow position: | chr7:34004148-34004303 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 295-482 |
| Cow position: | chr7:58614574-58614763 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 109, 11 |
| Conread position: | 306-475 |
| Cow position: | chr7:63946782-63946620 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 307-481 |
| Cow position: | chr7:39930088-39930261 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 146, 60 |
| Conread position: | 308-472 |
| Cow position: | chr7:50075935-50075763 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 308-475 |
| Cow position: | chr7:29346145-29345970 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 85 |
| Conread position: | 308-477 |
| Cow position: | chr7:43109740-43109565 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 115, 45 |
| Conread position: | 308-481 |
| Cow position: | chr7:24718743-24718560 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 308-482 |
| Cow position: | chr7:19616904-19616731 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 308-502 |
| Cow position: | chr7:25263158-25263369 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 310-482 |
| Cow position: | chr7:61425357-61425528 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 312-471 |
| Cow position: | chr7:68173358-68173193 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 312-499 |
| Cow position: | chr7:19096236-19096035 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 82, 140 |
| Conread position: | 319-481 |
| Cow position: | chr7:37371816-37371973 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 319-502 |
| Cow position: | chr7:256005-255819 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 320-502 |
| Cow position: | chr7:67816711-67816896 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 76 |
| Conread position: | 324-452 |
| Cow position: | chr7:64135657-64135527 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 325-499 |
| Cow position: | chr7:535917-535740 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 68 |
| Conread position: | 326-481 |
| Cow position: | chr7:35286822-35286668 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 112, 58 |
| Conread position: | 330-475 |
| Cow position: | chr7:59688354-59688501 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 81 |
| Conread position: | 341-477 |
| Cow position: | chr7:59941446-59941583 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 52 |
| Conread position: | 343-481 |
| Cow position: | chr7:61790529-61790385 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 80, 50 |
Show alignments to all cow chromosomes.