Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 254-486 |
| Cow position: | chr8:44127114-44127344 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 254-502 |
| Cow position: | chr8:36648750-36648492 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 268-481 |
| Cow position: | chr8:3891709-3891491 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 5, 43 |
| Conread position: | 277-473 |
| Cow position: | chr8:35583828-35583645 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 177, 29 |
| Conread position: | 277-481 |
| Cow position: | chr8:54572375-54572583 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 286-483 |
| Cow position: | chr8:40030723-40030517 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 117, 7 |
| Conread position: | 288-473 |
| Cow position: | chr8:5485138-5484943 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 107, 20 |
| Conread position: | 288-481 |
| Cow position: | chr8:59642760-59642563 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 288-502 |
| Cow position: | chr8:53383146-53383362 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 290-473 |
| Cow position: | chr8:7064529-7064352 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 291-502 |
| Cow position: | chr8:32295996-32295767 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 90, 219 |
| Conread position: | 292-454 |
| Cow position: | chr8:9230139-9229987 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 292-471 |
| Cow position: | chr8:55726518-55726346 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 292-473 |
| Cow position: | chr8:21077344-21077517 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-473 |
| Cow position: | chr8:46952276-46952449 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 292-475 |
| Cow position: | chr8:2621466-2621659 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 292-475 |
| Cow position: | chr8:6076795-6076613 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 292-475 |
| Cow position: | chr8:18831485-18831667 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 292-475 |
| Cow position: | chr8:45245268-45245085 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 292-481 |
| Cow position: | chr8:1187682-1187857 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 156, 14 |
| Conread position: | 292-481 |
| Cow position: | chr8:24872122-24871934 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-481 |
| Cow position: | chr8:31253556-31253750 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 292-482 |
| Cow position: | chr8:6417474-6417279 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 292-487 |
| Cow position: | chr8:22154311-22154113 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 115, 14 |
| Conread position: | 292-502 |
| Cow position: | chr8:4940563-4940346 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-502 |
| Cow position: | chr8:6233152-6232935 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-502 |
| Cow position: | chr8:34400693-34400908 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-502 |
| Cow position: | chr8:36375766-36375553 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr8:39475185-39475404 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 292-502 |
| Cow position: | chr8:56581453-56581249 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 293-481 |
| Cow position: | chr8:3446332-3446161 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 151, 13 |
| Conread position: | 293-485 |
| Cow position: | chr8:54269250-54269068 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 293-502 |
| Cow position: | chr8:9942778-9942562 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 293-502 |
| Cow position: | chr8:21221950-21222158 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 121, 13 |
| Conread position: | 293-502 |
| Cow position: | chr8:55716502-55716715 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 294-473 |
| Cow position: | chr8:25591566-25591749 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 102, 12 |
| Conread position: | 294-481 |
| Cow position: | chr8:50957574-50957394 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 296-479 |
| Cow position: | chr8:16093029-16093212 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 296-502 |
| Cow position: | chr8:1297266-1297474 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 297-475 |
| Cow position: | chr8:19430090-19429913 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 9 |
| Conread position: | 298-452 |
| Cow position: | chr8:18730190-18730348 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 308-481 |
| Cow position: | chr8:28412852-28412677 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 105, 73 |
| Conread position: | 308-493 |
| Cow position: | chr8:29958187-29958371 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 158, 87 |
| Conread position: | 308-502 |
| Cow position: | chr8:33585972-33586177 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 308-502 |
| Cow position: | chr8:45664534-45664737 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 115, 87 |
| Conread position: | 311-475 |
| Cow position: | chr8:7149923-7149762 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 143, 71 |
| Conread position: | 312-472 |
| Cow position: | chr8:23030200-23030355 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 142, 28 |
| Conread position: | 313-481 |
| Cow position: | chr8:39144527-39144688 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 319-502 |
| Cow position: | chr8:53558832-53558645 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 78 |
| Conread position: | 320-481 |
| Cow position: | chr8:35990818-35990987 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 73 |
| Conread position: | 320-502 |
| Cow position: | chr8:45781889-45781702 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 324-481 |
| Cow position: | chr8:669790-669631 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 331-473 |
| Cow position: | chr8:45690118-45689974 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 92, 51 |
| Conread position: | 331-481 |
| Cow position: | chr8:42145991-42145838 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 69, 108 |
| Conread position: | 332-502 |
| Cow position: | chr8:37147903-37148084 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 366-481 |
| Cow position: | chr8:35497691-35497807 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 89, 27 |
Show alignments to all cow chromosomes.