Cow genome map
| Conread name: | Pig2-74D03 |
| Conread position: | 258-481 |
| Cow position: | chr9:9416079-9416303 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 48 |
| Conread position: | 266-473 |
| Cow position: | chr9:18139973-18140187 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 280-463 |
| Cow position: | chr9:29808773-29808582 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 281-502 |
| Cow position: | chr9:26577552-26577778 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 20, 118 |
| Conread position: | 283-481 |
| Cow position: | chr9:34468290-34468482 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 287-473 |
| Cow position: | chr9:17785162-17785352 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 288-480 |
| Cow position: | chr9:3220419-3220239 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 167, 35 |
| Conread position: | 291-502 |
| Cow position: | chr9:10308712-10308932 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 292-453 |
| Cow position: | chr9:32787814-32787977 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 292-456 |
| Cow position: | chr9:60081438-60081283 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 292-472 |
| Cow position: | chr9:30664485-30664673 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 292-473 |
| Cow position: | chr9:2398338-2398518 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 292-473 |
| Cow position: | chr9:5393344-5393158 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 112, 19 |
| Conread position: | 292-475 |
| Cow position: | chr9:45141324-45141494 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 292-481 |
| Cow position: | chr9:5433925-5433739 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-481 |
| Cow position: | chr9:33093238-33093054 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 131, 14 |
| Conread position: | 292-481 |
| Cow position: | chr9:35305825-35306016 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 292-481 |
| Cow position: | chr9:38961143-38961333 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 292-481 |
| Cow position: | chr9:63746098-63745912 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 145, 14 |
| Conread position: | 292-482 |
| Cow position: | chr9:28773411-28773222 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-493 |
| Cow position: | chr9:16300280-16300476 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr9:26404083-26403861 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 292-502 |
| Cow position: | chr9:29841181-29840961 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 112, 13 |
| Conread position: | 292-502 |
| Cow position: | chr9:32812640-32812421 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 293-502 |
| Cow position: | chr9:31347246-31347032 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 293-502 |
| Cow position: | chr9:36623159-36623367 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 161, 13 |
| Conread position: | 293-502 |
| Cow position: | chr9:47905997-47906200 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 162, 13 |
| Conread position: | 294-472 |
| Cow position: | chr9:6192167-6192351 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 296-475 |
| Cow position: | chr9:42585336-42585518 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 127, 10 |
| Conread position: | 296-481 |
| Cow position: | chr9:41680024-41679847 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 298-481 |
| Cow position: | chr9:3070135-3070319 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 140, 8 |
| Conread position: | 308-439 |
| Cow position: | chr9:51566208-51566337 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 308-475 |
| Cow position: | chr9:24997236-24997412 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 87, 52 |
| Conread position: | 308-481 |
| Cow position: | chr9:5532232-5532049 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 308-502 |
| Cow position: | chr9:20738982-20738778 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 108, 87 |
| Conread position: | 308-502 |
| Cow position: | chr9:58204943-58204741 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 308-502 |
| Cow position: | chr9:62657072-62656878 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 105 |
| Conread position: | 308-504 |
| Cow position: | chr9:31626429-31626225 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 88, 132 |
| Conread position: | 309-475 |
| Cow position: | chr9:30749306-30749479 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 114, 84 |
| Conread position: | 314-481 |
| Cow position: | chr9:18093390-18093560 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 64 |
| Conread position: | 319-478 |
| Cow position: | chr9:52001276-52001115 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 323-480 |
| Cow position: | chr9:26555941-26556098 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 98, 70 |
| Conread position: | 323-481 |
| Cow position: | chr9:6225187-6225352 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 323-502 |
| Cow position: | chr9:23541153-23541331 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 159, 70 |
| Conread position: | 323-502 |
| Cow position: | chr9:49983427-49983612 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 70 |
| Conread position: | 324-482 |
| Cow position: | chr9:20318314-20318476 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 71 |
| Conread position: | 325-481 |
| Cow position: | chr9:34901852-34902007 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 332-481 |
| Cow position: | chr9:28735735-28735581 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 62 |
| Conread position: | 335-478 |
| Cow position: | chr9:31814125-31814270 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 58 |
Show alignments to all cow chromosomes.