Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-121 |
| Cow position: | chr10:24785288-24785163 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-121 |
| Cow position: | chr10:41406168-41406043 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-123 |
| Cow position: | chr10:51836973-51837097 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-182 |
| Cow position: | chr10:66875873-66876062 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 93 |
| Conread position: | 1-183 |
| Cow position: | chr10:6253304-6253488 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 1-185 |
| Cow position: | chr10:21461236-21461042 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 173 |
| Conread position: | 1-185 |
| Cow position: | chr10:43489134-43488937 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-188 |
| Cow position: | chr10:31637166-31636973 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-196 |
| Cow position: | chr10:15867443-15867235 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-199 |
| Cow position: | chr10:31669774-31669562 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 165 |
| Conread position: | 1-204 |
| Cow position: | chr10:9799011-9799228 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 62, 113 |
| Conread position: | 1-204 |
| Cow position: | chr10:36231203-36230990 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 1-205 |
| Cow position: | chr10:67105787-67105998 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 1-231 |
| Cow position: | chr10:53157916-53158163 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 63, 192 |
| Conread position: | 1-248 |
| Cow position: | chr10:4640850-4641117 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-248 |
| Cow position: | chr10:21081347-21081077 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-248 |
| Cow position: | chr10:23648786-23649052 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-248 |
| Cow position: | chr10:24751417-24751157 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-248 |
| Cow position: | chr10:31655730-31655466 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 1-248 |
| Cow position: | chr10:38273624-38273367 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 63, 185 |
| Conread position: | 1-248 |
| Cow position: | chr10:44705207-44705469 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 62, 55 |
| Conread position: | 1-248 |
| Cow position: | chr10:45484501-45484763 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-248 |
| Cow position: | chr10:47772921-47772658 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 60, 165 |
| Conread position: | 1-248 |
| Cow position: | chr10:55096567-55096304 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 62, 194 |
| Conread position: | 1-248 |
| Cow position: | chr10:65810662-65810928 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-272 |
| Cow position: | chr10:67580294-67580573 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 54, 98 |
| Conread position: | 1-289 |
| Cow position: | chr10:26732463-26732755 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 1-291 |
| Cow position: | chr10:14332334-14332653 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 296 |
| Conread position: | 1-291 |
| Cow position: | chr10:63955002-63954692 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-293 |
| Cow position: | chr10:51863845-51864141 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 1-294 |
| Cow position: | chr10:277851-278172 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 62, 291 |
| Conread position: | 1-294 |
| Cow position: | chr10:7894942-7895262 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 238 |
| Conread position: | 1-294 |
| Cow position: | chr10:11623221-11623541 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 240 |
| Conread position: | 1-294 |
| Cow position: | chr10:20372920-20373246 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-294 |
| Cow position: | chr10:21709732-21710050 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 53, 235 |
| Conread position: | 1-294 |
| Cow position: | chr10:22978652-22978968 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-294 |
| Cow position: | chr10:29106319-29106631 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 60, 193 |
| Conread position: | 1-294 |
| Cow position: | chr10:37908643-37908965 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-294 |
| Cow position: | chr10:39811004-39811326 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 1-294 |
| Cow position: | chr10:41560969-41561291 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 289 |
| Conread position: | 1-294 |
| Cow position: | chr10:41570607-41570289 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-294 |
| Cow position: | chr10:42214382-42214059 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 293 |
| Conread position: | 1-294 |
| Cow position: | chr10:46226326-46226011 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 1-294 |
| Cow position: | chr10:50016878-50017180 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 191 |
| Conread position: | 1-294 |
| Cow position: | chr10:52826122-52826444 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 292 |
| Conread position: | 1-294 |
| Cow position: | chr10:59173563-59173875 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 282 |
| Conread position: | 1-294 |
| Cow position: | chr10:60960117-60959805 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-321 |
| Cow position: | chr10:3317255-3316921 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 1-452 |
| Cow position: | chr10:20398412-20397916 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 1-457 |
| Cow position: | chr10:14857784-14857294 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 165 |
| Conread position: | 1-459 |
| Cow position: | chr10:37530317-37530817 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 145 |
| Conread position: | 1-468 |
| Cow position: | chr10:19894509-19894023 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 1-479 |
| Cow position: | chr10:10570664-10570155 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 66, 98 |
| Conread position: | 1-487 |
| Cow position: | chr10:25341613-25341109 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 320 |
| Conread position: | 2-199 |
| Cow position: | chr10:9452154-9452359 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 2-248 |
| Cow position: | chr10:22528719-22528981 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 2-466 |
| Cow position: | chr10:40106262-40105783 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 108 |
| Conread position: | 3-292 |
| Cow position: | chr10:29628765-29629081 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 288 |
| Conread position: | 3-294 |
| Cow position: | chr10:37788499-37788812 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-294 |
| Cow position: | chr10:38941624-38941304 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 59, 293 |
| Conread position: | 3-302 |
| Cow position: | chr10:56834466-56834153 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 53, 108 |
| Conread position: | 4-248 |
| Cow position: | chr10:40269368-40269108 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 4-294 |
| Cow position: | chr10:20380484-20380801 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 287 |
| Conread position: | 6-248 |
| Cow position: | chr10:64286878-64287133 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 6-294 |
| Cow position: | chr10:2516535-2516222 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 287 |
| Conread position: | 7-366 |
| Cow position: | chr10:49914258-49914650 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 286 |
| Conread position: | 11-294 |
| Cow position: | chr10:14982478-14982777 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 14-230 |
| Cow position: | chr10:60354632-60354397 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 140 |
| Conread position: | 16-487 |
| Cow position: | chr10:69935616-69936113 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 177 |
| Conread position: | 19-294 |
| Cow position: | chr10:19491307-19491592 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 51 |
| Conread position: | 34-487 |
| Cow position: | chr10:11110743-11110238 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 260 |
| Conread position: | 235-459 |
| Cow position: | chr10:68096097-68096345 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 296-457 |
| Cow position: | chr10:61312650-61312479 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 298-486 |
| Cow position: | chr10:42754225-42754033 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 143 |
| Conread position: | 350-487 |
| Cow position: | chr10:47157029-47156898 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 15 |
Show alignments to all cow chromosomes.