Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-159 |
| Cow position: | chr13:60967558-60967729 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-167 |
| Cow position: | chr13:43594050-43593877 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 167 |
| Conread position: | 1-181 |
| Cow position: | chr13:30431336-30431159 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 144, 43 |
| Conread position: | 1-190 |
| Cow position: | chr13:46736967-46737155 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 110, 43 |
| Conread position: | 1-194 |
| Cow position: | chr13:47189236-47189031 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 103 |
| Conread position: | 1-199 |
| Cow position: | chr13:30241785-30241574 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-200 |
| Cow position: | chr13:16344927-16345136 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 77 |
| Conread position: | 1-202 |
| Cow position: | chr13:15446793-15447001 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 1-248 |
| Cow position: | chr13:21134951-21134688 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 77 |
| Conread position: | 1-248 |
| Cow position: | chr13:21905692-21905964 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-248 |
| Cow position: | chr13:22084991-22084724 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-248 |
| Cow position: | chr13:34051839-34051576 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-248 |
| Cow position: | chr13:49805727-49805988 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-248 |
| Cow position: | chr13:54238228-54238489 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 1-289 |
| Cow position: | chr13:61954462-61954145 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 62, 174 |
| Conread position: | 1-292 |
| Cow position: | chr13:34298800-34298480 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 1-293 |
| Cow position: | chr13:11826543-11826853 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 1-294 |
| Cow position: | chr13:8782127-8781806 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 1-294 |
| Cow position: | chr13:9570794-9571103 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 233 |
| Conread position: | 1-294 |
| Cow position: | chr13:16248721-16249044 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 293 |
| Conread position: | 1-294 |
| Cow position: | chr13:17496307-17495982 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 293 |
| Conread position: | 1-294 |
| Cow position: | chr13:20563768-20564085 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 57 |
| Conread position: | 1-294 |
| Cow position: | chr13:20571495-20571812 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 64 |
| Conread position: | 1-294 |
| Cow position: | chr13:22774522-22774201 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 291 |
| Conread position: | 1-294 |
| Cow position: | chr13:22780768-22781088 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 37, 43 |
| Conread position: | 1-294 |
| Cow position: | chr13:30468898-30469218 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 294 |
| Conread position: | 1-294 |
| Cow position: | chr13:32774132-32774447 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 196 |
| Conread position: | 1-294 |
| Cow position: | chr13:34905365-34905676 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 1-294 |
| Cow position: | chr13:36936951-36936630 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 251 |
| Conread position: | 1-294 |
| Cow position: | chr13:44323745-44324063 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 286 |
| Conread position: | 1-294 |
| Cow position: | chr13:53157169-53157491 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 1-294 |
| Cow position: | chr13:58740789-58740474 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 63, 188 |
| Conread position: | 1-294 |
| Cow position: | chr13:60426250-60425930 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 248 |
| Conread position: | 1-459 |
| Cow position: | chr13:32794123-32794639 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 294 |
| Conread position: | 1-487 |
| Cow position: | chr13:42088262-42088760 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 63 |
| Conread position: | 1-487 |
| Cow position: | chr13:47574352-47574867 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 3-248 |
| Cow position: | chr13:30652067-30652330 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-292 |
| Cow position: | chr13:34376311-34376630 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 58, 293 |
| Conread position: | 3-293 |
| Cow position: | chr13:34508610-34508923 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 284 |
| Conread position: | 3-293 |
| Cow position: | chr13:42114784-42115095 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 113, 52 |
| Conread position: | 3-294 |
| Cow position: | chr13:17277369-17277057 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 3-486 |
| Cow position: | chr13:31510362-31509822 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 194 |
| Conread position: | 3-487 |
| Cow position: | chr13:34940893-34940344 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 390 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 63, 304 |
| Conread position: | 4-294 |
| Cow position: | chr13:3001134-3001444 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 278 |
| Conread position: | 5-293 |
| Cow position: | chr13:22907052-22907370 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 296-455 |
| Cow position: | chr13:54238576-54238743 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 296-458 |
| Cow position: | chr13:3015045-3014876 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 296-466 |
| Cow position: | chr13:34051497-34051318 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 296-487 |
| Cow position: | chr13:34322099-34322291 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 110 |
| Conread position: | 296-487 |
| Cow position: | chr13:35760424-35760231 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 60 |
Show alignments to all cow chromosomes.