Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-124 |
| Cow position: | chr14:39433447-39433319 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-151 |
| Cow position: | chr14:10349771-10349934 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-177 |
| Cow position: | chr14:40229807-40229628 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 63, 129 |
| Conread position: | 1-191 |
| Cow position: | chr14:45278279-45278076 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-204 |
| Cow position: | chr14:18497069-18496860 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 62, 194 |
| Conread position: | 1-204 |
| Cow position: | chr14:19317930-19317711 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-204 |
| Cow position: | chr14:21728113-21727897 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 62, 192 |
| Conread position: | 1-211 |
| Cow position: | chr14:48828314-48828089 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-232 |
| Cow position: | chr14:34354639-34354390 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-245 |
| Cow position: | chr14:47873034-47873297 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-247 |
| Cow position: | chr14:30662947-30663215 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-248 |
| Cow position: | chr14:12066358-12066624 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-283 |
| Cow position: | chr14:33550369-33550651 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 196, 59 |
| Conread position: | 1-290 |
| Cow position: | chr14:35382409-35382704 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 103 |
| Conread position: | 1-292 |
| Cow position: | chr14:41717130-41717441 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 246 |
| Conread position: | 1-293 |
| Cow position: | chr14:26496681-26497006 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 60, 293 |
| Conread position: | 1-293 |
| Cow position: | chr14:50069108-50069423 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 290 |
| Conread position: | 1-294 |
| Cow position: | chr14:424270-423954 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 99 |
| Conread position: | 1-294 |
| Cow position: | chr14:12613316-12612999 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 65, 190 |
| Conread position: | 1-294 |
| Cow position: | chr14:17488249-17488571 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 1-294 |
| Cow position: | chr14:17690210-17689896 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 59 |
| Conread position: | 1-294 |
| Cow position: | chr14:21390292-21390593 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 62, 96 |
| Conread position: | 1-294 |
| Cow position: | chr14:30581375-30581698 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 62, 103 |
| Conread position: | 1-294 |
| Cow position: | chr14:34394823-34394507 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 61, 178 |
| Conread position: | 1-294 |
| Cow position: | chr14:49329062-49328739 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 297 |
| Conread position: | 1-294 |
| Cow position: | chr14:49995455-49995775 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 294 |
| Conread position: | 1-319 |
| Cow position: | chr14:7812749-7812422 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 1-487 |
| Cow position: | chr14:13619355-13619889 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 1-487 |
| Cow position: | chr14:44382368-44381863 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 345 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 50, 290 |
| Conread position: | 1-487 |
| Cow position: | chr14:44554930-44554405 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 1-487 |
| Cow position: | chr14:45583400-45582874 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 352 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 2-294 |
| Cow position: | chr14:35419956-35419645 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 59, 163 |
| Conread position: | 3-134 |
| Cow position: | chr14:20467221-20467084 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 3-182 |
| Cow position: | chr14:45300010-45299825 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 95 |
| Conread position: | 3-248 |
| Cow position: | chr14:48360798-48361045 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 72, 57 |
| Conread position: | 3-288 |
| Cow position: | chr14:21201009-21200698 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 58, 289 |
| Conread position: | 3-289 |
| Cow position: | chr14:30738737-30738428 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 58, 286 |
| Conread position: | 3-294 |
| Cow position: | chr14:21540831-21541140 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 3-294 |
| Cow position: | chr14:39821999-39822309 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 78, 90 |
| Conread position: | 3-294 |
| Cow position: | chr14:41478832-41478517 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 287 |
| Conread position: | 3-300 |
| Cow position: | chr14:28796499-28796813 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 127 |
| Conread position: | 3-459 |
| Cow position: | chr14:35497607-35497112 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 290 |
| Conread position: | 5-294 |
| Cow position: | chr14:8884796-8885113 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 58, 243 |
| Conread position: | 10-294 |
| Cow position: | chr14:44076605-44076918 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 52, 143 |
| Conread position: | 12-286 |
| Cow position: | chr14:25683719-25684013 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 54, 192 |
| Conread position: | 14-294 |
| Cow position: | chr14:42626602-42626909 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 52, 279 |
| Conread position: | 16-248 |
| Cow position: | chr14:40475647-40475890 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 50, 88 |
| Conread position: | 16-294 |
| Cow position: | chr14:43561271-43560971 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 143 |
| Conread position: | 17-239 |
| Cow position: | chr14:46752517-46752752 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 106, 150 |
| Conread position: | 48-294 |
| Cow position: | chr14:17757010-17757272 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 147, 232 |
| Conread position: | 112-460 |
| Cow position: | chr14:21689204-21688828 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 324 |
| Conread position: | 220-486 |
| Cow position: | chr14:44261288-44261011 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 295-487 |
| Cow position: | chr14:21390615-21390799 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 88, 67 |
| Conread position: | 296-459 |
| Cow position: | chr14:26449771-26449929 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 296-487 |
| Cow position: | chr14:1661191-1661000 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 161 |
| Conread position: | 297-450 |
| Cow position: | chr14:40475964-40476123 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 365-487 |
| Cow position: | chr14:15272599-15272717 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 365-487 |
| Cow position: | chr14:17689790-17689673 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.