Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-148 |
| Cow position: | chr15:20458424-20458282 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 110 |
| Conread position: | 1-148 |
| Cow position: | chr15:33975560-33975410 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 1-179 |
| Cow position: | chr15:8937504-8937313 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 172 |
| Conread position: | 1-185 |
| Cow position: | chr15:6158278-6158081 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-199 |
| Cow position: | chr15:22095975-22096184 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-199 |
| Cow position: | chr15:47842181-47841972 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 194 |
| Conread position: | 1-230 |
| Cow position: | chr15:35833-35591 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-237 |
| Cow position: | chr15:35739325-35739079 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 60, 156 |
| Conread position: | 1-248 |
| Cow position: | chr15:336774-336513 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 169 |
| Conread position: | 1-248 |
| Cow position: | chr15:609023-609291 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-248 |
| Cow position: | chr15:2928352-2928087 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 1-248 |
| Cow position: | chr15:4769598-4769332 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-248 |
| Cow position: | chr15:7962948-7963207 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 119 |
| Conread position: | 1-248 |
| Cow position: | chr15:32689835-32690098 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 1-248 |
| Cow position: | chr15:36355975-36356241 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 1-250 |
| Cow position: | chr15:20348174-20348437 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 150 |
| Conread position: | 1-287 |
| Cow position: | chr15:45244688-45244379 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 1-288 |
| Cow position: | chr15:33527475-33527781 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 120, 64 |
| Conread position: | 1-291 |
| Cow position: | chr15:60711-60407 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 1-291 |
| Cow position: | chr15:20352711-20353019 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-292 |
| Cow position: | chr15:26933136-26932816 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 60, 290 |
| Conread position: | 1-293 |
| Cow position: | chr15:21607868-21607548 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 255 |
| Conread position: | 1-293 |
| Cow position: | chr15:35643367-35643678 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 1-293 |
| Cow position: | chr15:47201481-47201795 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 285 |
| Conread position: | 1-294 |
| Cow position: | chr15:4077039-4077357 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 61, 205 |
| Conread position: | 1-294 |
| Cow position: | chr15:6281737-6281424 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 96 |
| Conread position: | 1-294 |
| Cow position: | chr15:6648322-6648637 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 1-294 |
| Cow position: | chr15:7319659-7319338 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 295 |
| Conread position: | 1-294 |
| Cow position: | chr15:7566097-7565775 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 292 |
| Conread position: | 1-294 |
| Cow position: | chr15:7941511-7941198 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 245 |
| Conread position: | 1-294 |
| Cow position: | chr15:8629400-8629082 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 102 |
| Conread position: | 1-294 |
| Cow position: | chr15:13076613-13076292 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 156 |
| Conread position: | 1-294 |
| Cow position: | chr15:13683428-13683114 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 112, 160 |
| Conread position: | 1-294 |
| Cow position: | chr15:23774390-23774075 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 68, 102 |
| Conread position: | 1-294 |
| Cow position: | chr15:24796937-24796638 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 1-294 |
| Cow position: | chr15:25133056-25132729 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 62, 297 |
| Conread position: | 1-294 |
| Cow position: | chr15:36329366-36329688 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 296 |
| Conread position: | 1-294 |
| Cow position: | chr15:36622576-36622890 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 51 |
| Conread position: | 1-294 |
| Cow position: | chr15:36940289-36940610 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 63, 134 |
| Conread position: | 1-294 |
| Cow position: | chr15:39091114-39091422 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 1-295 |
| Cow position: | chr15:4689127-4688803 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 65, 246 |
| Conread position: | 1-459 |
| Cow position: | chr15:4787707-4788227 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 293 |
| Conread position: | 1-459 |
| Cow position: | chr15:22759910-22760418 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 293 |
| Conread position: | 1-485 |
| Cow position: | chr15:10826528-10826026 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 1-485 |
| Cow position: | chr15:22539745-22540267 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 291 |
| Conread position: | 3-186 |
| Cow position: | chr15:4874785-4874975 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 3-292 |
| Cow position: | chr15:11290689-11290996 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 100 |
| Conread position: | 3-294 |
| Cow position: | chr15:2806180-2806481 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 3-294 |
| Cow position: | chr15:5498146-5497832 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 64, 148 |
| Conread position: | 3-294 |
| Cow position: | chr15:5983720-5983399 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 55, 294 |
| Conread position: | 5-294 |
| Cow position: | chr15:4674423-4674105 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 291 |
| Conread position: | 10-248 |
| Cow position: | chr15:18419-18167 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 46, 163 |
| Conread position: | 16-247 |
| Cow position: | chr15:35416669-35416423 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-294 |
| Cow position: | chr15:21831017-21830715 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 21-294 |
| Cow position: | chr15:14578339-14578631 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 22-247 |
| Cow position: | chr15:26077797-26077563 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 22-248 |
| Cow position: | chr15:22162197-22162428 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 25-248 |
| Cow position: | chr15:38684068-38684303 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 38, 106 |
| Conread position: | 26-248 |
| Cow position: | chr15:14321238-14321016 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 26-366 |
| Cow position: | chr15:38937835-38937464 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 35, 73 |
| Conread position: | 295-467 |
| Cow position: | chr15:8753611-8753439 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 296-450 |
| Cow position: | chr15:6330876-6330714 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 296-487 |
| Cow position: | chr15:21533388-21533583 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 165 |
| Conread position: | 296-487 |
| Cow position: | chr15:23560582-23560402 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 297-487 |
| Cow position: | chr15:14579404-14579597 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 299-487 |
| Cow position: | chr15:4860203-4860397 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 66 |
Show alignments to all cow chromosomes.