Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-117 |
| Cow position: | chr16:44973001-44973122 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-120 |
| Cow position: | chr16:42254572-42254691 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-157 |
| Cow position: | chr16:39457131-39456966 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-184 |
| Cow position: | chr16:26658711-26658515 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-190 |
| Cow position: | chr16:7541228-7541030 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-199 |
| Cow position: | chr16:24147398-24147192 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-224 |
| Cow position: | chr16:49577720-49577501 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 123 |
| Conread position: | 1-238 |
| Cow position: | chr16:15369737-15369491 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-248 |
| Cow position: | chr16:15485533-15485271 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 1-248 |
| Cow position: | chr16:23810263-23810001 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-248 |
| Cow position: | chr16:25168973-25168717 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 1-248 |
| Cow position: | chr16:27013143-27012882 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 60, 171 |
| Conread position: | 1-248 |
| Cow position: | chr16:34482903-34482645 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 115, 175 |
| Conread position: | 1-248 |
| Cow position: | chr16:41575989-41575734 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 204 |
| Conread position: | 1-248 |
| Cow position: | chr16:47773010-47772740 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-248 |
| Cow position: | chr16:51400815-51401067 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 1-249 |
| Cow position: | chr16:14029415-14029662 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 1-258 |
| Cow position: | chr16:29093867-29093587 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-286 |
| Cow position: | chr16:41834612-41834313 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 194 |
| Conread position: | 1-288 |
| Cow position: | chr16:47367732-47367427 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-291 |
| Cow position: | chr16:37053784-37053465 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 63, 292 |
| Conread position: | 1-292 |
| Cow position: | chr16:45560039-45559731 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 60, 251 |
| Conread position: | 1-292 |
| Cow position: | chr16:55868066-55867770 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 1-293 |
| Cow position: | chr16:237223-236921 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 63, 85 |
| Conread position: | 1-293 |
| Cow position: | chr16:8481883-8482195 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 287 |
| Conread position: | 1-293 |
| Cow position: | chr16:42074152-42074473 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 292 |
| Conread position: | 1-293 |
| Cow position: | chr16:56913492-56913808 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 205 |
| Conread position: | 1-294 |
| Cow position: | chr16:193192-193511 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 65, 97 |
| Conread position: | 1-294 |
| Cow position: | chr16:702005-701685 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 63, 290 |
| Conread position: | 1-294 |
| Cow position: | chr16:1957981-1958295 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-294 |
| Cow position: | chr16:2232980-2233302 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 297 |
| Conread position: | 1-294 |
| Cow position: | chr16:7457240-7457558 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 288 |
| Conread position: | 1-294 |
| Cow position: | chr16:10372690-10373010 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 290 |
| Conread position: | 1-294 |
| Cow position: | chr16:12244299-12244617 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 63, 110 |
| Conread position: | 1-294 |
| Cow position: | chr16:12737026-12736703 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-294 |
| Cow position: | chr16:15570516-15570193 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 62, 297 |
| Conread position: | 1-294 |
| Cow position: | chr16:16150002-16150323 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 62, 291 |
| Conread position: | 1-294 |
| Cow position: | chr16:18745294-18745606 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 1-294 |
| Cow position: | chr16:28193555-28193876 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 1-294 |
| Cow position: | chr16:32326608-32326288 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 1-294 |
| Cow position: | chr16:37925239-37925551 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-294 |
| Cow position: | chr16:41804711-41805016 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 60, 88 |
| Conread position: | 1-294 |
| Cow position: | chr16:45609155-45608839 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 290 |
| Conread position: | 1-294 |
| Cow position: | chr16:45754885-45755188 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 130, 184 |
| Conread position: | 1-294 |
| Cow position: | chr16:49126962-49127266 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 59 |
| Conread position: | 1-294 |
| Cow position: | chr16:49219207-49219525 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 288 |
| Conread position: | 1-294 |
| Cow position: | chr16:53225597-53225896 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 1-295 |
| Cow position: | chr16:37058269-37058586 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 61, 190 |
| Conread position: | 1-296 |
| Cow position: | chr16:47018008-47018327 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 60, 285 |
| Conread position: | 1-459 |
| Cow position: | chr16:55591257-55591754 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 346 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 52, 118 |
| Conread position: | 1-460 |
| Cow position: | chr16:41623944-41624440 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 1-484 |
| Cow position: | chr16:49253506-49254035 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 2-248 |
| Cow position: | chr16:29512516-29512256 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 2-294 |
| Cow position: | chr16:5665846-5665522 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-443 |
| Cow position: | chr16:29158357-29157881 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 3-179 |
| Cow position: | chr16:2224206-2224394 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-209 |
| Cow position: | chr16:9786059-9785841 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 61, 206 |
| Conread position: | 3-294 |
| Cow position: | chr16:3820116-3819789 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 51, 300 |
| Conread position: | 3-294 |
| Cow position: | chr16:4691158-4690856 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 4-240 |
| Cow position: | chr16:49516039-49516296 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 107 |
| Conread position: | 5-235 |
| Cow position: | chr16:15409343-15409596 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 56, 194 |
| Conread position: | 15-294 |
| Cow position: | chr16:14569467-14569772 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 278 |
| Conread position: | 22-248 |
| Cow position: | chr16:11054715-11054471 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 33-450 |
| Cow position: | chr16:47476687-47476241 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 255 |
| Conread position: | 90-437 |
| Cow position: | chr16:49170332-49170723 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 285 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 32, 139 |
| Conread position: | 296-439 |
| Cow position: | chr16:16095600-16095455 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 296-467 |
| Cow position: | chr16:8813701-8813888 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 296-485 |
| Cow position: | chr16:4973124-4973320 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 162 |
| Conread position: | 296-487 |
| Cow position: | chr16:15979977-15980177 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 296-487 |
| Cow position: | chr16:51087185-51086983 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 174 |
| Conread position: | 316-487 |
| Cow position: | chr16:28022678-28022852 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 98 |
| Conread position: | 365-487 |
| Cow position: | chr16:14352363-14352480 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 18, 10 |
Show alignments to all cow chromosomes.