Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-121 |
| Cow position: | chr17:979879-980004 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-167 |
| Cow position: | chr17:42313190-42313011 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-171 |
| Cow position: | chr17:12290180-12290364 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-200 |
| Cow position: | chr17:11913443-11913655 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-204 |
| Cow position: | chr17:36747223-36747433 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 68, 102 |
| Conread position: | 1-248 |
| Cow position: | chr17:20091317-20091566 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 101 |
| Conread position: | 1-286 |
| Cow position: | chr17:36265967-36266266 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 1-289 |
| Cow position: | chr17:20093854-20094169 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 79, 151 |
| Conread position: | 1-294 |
| Cow position: | chr17:6071847-6071519 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 302 |
| Conread position: | 1-294 |
| Cow position: | chr17:15854041-15853718 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 62, 297 |
| Conread position: | 1-294 |
| Cow position: | chr17:16447176-16447494 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 204 |
| Conread position: | 1-294 |
| Cow position: | chr17:18201027-18200722 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 1-294 |
| Cow position: | chr17:20033715-20033420 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 205, 44 |
| Conread position: | 1-294 |
| Cow position: | chr17:31232976-31232663 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 62, 158 |
| Conread position: | 1-294 |
| Cow position: | chr17:43471285-43471606 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 62, 289 |
| Conread position: | 1-295 |
| Cow position: | chr17:15809293-15808970 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 1-295 |
| Cow position: | chr17:37415586-37415905 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 50, 288 |
| Conread position: | 1-459 |
| Cow position: | chr17:33792378-33791890 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 1-487 |
| Cow position: | chr17:16118159-16118686 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 175 |
| Conread position: | 1-487 |
| Cow position: | chr17:16869991-16870499 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 127 |
| Conread position: | 2-250 |
| Cow position: | chr17:29156678-29156416 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 3-205 |
| Cow position: | chr17:8450015-8449800 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-248 |
| Cow position: | chr17:21304593-21304328 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-291 |
| Cow position: | chr17:1672601-1672287 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 3-292 |
| Cow position: | chr17:1568916-1569228 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 63, 171 |
| Conread position: | 3-294 |
| Cow position: | chr17:20084507-20084827 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 53, 292 |
| Conread position: | 3-487 |
| Cow position: | chr17:38829184-38828681 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 4-294 |
| Cow position: | chr17:11032452-11032135 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 65, 167 |
| Conread position: | 13-180 |
| Cow position: | chr17:18721332-18721500 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 115 |
| Conread position: | 22-184 |
| Cow position: | chr17:24876719-24876888 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 25-248 |
| Cow position: | chr17:29897921-29897683 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 25-288 |
| Cow position: | chr17:4085349-4085058 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 36, 267 |
| Conread position: | 35-290 |
| Cow position: | chr17:1784273-1784552 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 296-452 |
| Cow position: | chr17:15438754-15438594 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 78, 117 |
| Conread position: | 296-459 |
| Cow position: | chr17:27978072-27977904 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 296-487 |
| Cow position: | chr17:15140378-15140578 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 296-487 |
| Cow position: | chr17:18591384-18591191 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 68, 109 |
| Conread position: | 296-487 |
| Cow position: | chr17:24785151-24784956 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 165 |
| Conread position: | 297-459 |
| Cow position: | chr17:5043633-5043805 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 305-467 |
| Cow position: | chr17:20089715-20089879 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 84, 77 |
Show alignments to all cow chromosomes.