Cow genome map

Conread name: Pig2-91C13

Conread position: 1-120
Cow position: chr2:31124994-31124870 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-121
Cow position: chr2:38260223-38260349 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-121
Cow position: chr2:39661841-39661965 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 98

Conread position: 1-121
Cow position: chr2:60051490-60051615 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-134
Cow position: chr2:85739338-85739201 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 130

Conread position: 1-148
Cow position: chr2:71164484-71164640 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr2:76314825-76314990 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 39

Conread position: 1-187
Cow position: chr2:6038187-6038380 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 1-188
Cow position: chr2:38271377-38271566 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 92

Conread position: 1-190
Cow position: chr2:77281157-77280956 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 98

Conread position: 1-209
Cow position: chr2:16497139-16497355 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 173

Conread position: 1-225
Cow position: chr2:21407451-21407209 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 42

Conread position: 1-242
Cow position: chr2:80840192-80840450 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 173

Conread position: 1-244
Cow position: chr2:79967005-79967259 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 1-245
Cow position: chr2:53497683-53497940 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 251

Conread position: 1-248
Cow position: chr2:12184746-12184482 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 61, 156

Conread position: 1-248
Cow position: chr2:17941071-17941338 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 60, 0

Conread position: 1-248
Cow position: chr2:27075584-27075330 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 114

Conread position: 1-248
Cow position: chr2:42502506-42502241 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 1-248
Cow position: chr2:68191374-68191642 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 65, 87

Conread position: 1-248
Cow position: chr2:86349267-86349002 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 254

Conread position: 1-288
Cow position: chr2:24436111-24436401 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 164

Conread position: 1-289
Cow position: chr2:42839099-42839386 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 62, 217

Conread position: 1-289
Cow position: chr2:62683645-62683327 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 293

Conread position: 1-291
Cow position: chr2:104765-105083 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 295

Conread position: 1-291
Cow position: chr2:10972049-10971731 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 77

Conread position: 1-292
Cow position: chr2:778473-778791 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 288

Conread position: 1-292
Cow position: chr2:6883247-6882961 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 129

Conread position: 1-292
Cow position: chr2:12238044-12238331 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 65

Conread position: 1-293
Cow position: chr2:5867340-5867650 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 129

Conread position: 1-293
Cow position: chr2:19293870-19293578 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 64

Conread position: 1-293
Cow position: chr2:41157157-41156837 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 102

Conread position: 1-293
Cow position: chr2:72931110-72931426 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 111

Conread position: 1-293
Cow position: chr2:78854775-78854471 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 6

Conread position: 1-294
Cow position: chr2:2018538-2018222 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 164

Conread position: 1-294
Cow position: chr2:5997806-5997485 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 197

Conread position: 1-294
Cow position: chr2:7905914-7905602 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 23

Conread position: 1-294
Cow position: chr2:8529650-8529329 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 291

Conread position: 1-294
Cow position: chr2:9591156-9590865 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 94

Conread position: 1-294
Cow position: chr2:14207872-14208182 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 103

Conread position: 1-294
Cow position: chr2:15572089-15572405 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 150

Conread position: 1-294
Cow position: chr2:16752918-16753239 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 73

Conread position: 1-294
Cow position: chr2:17119099-17119421 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 292

Conread position: 1-294
Cow position: chr2:20917204-20917513 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 176

Conread position: 1-294
Cow position: chr2:20978012-20977696 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 170

Conread position: 1-294
Cow position: chr2:27358042-27357736 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 98

Conread position: 1-294
Cow position: chr2:29218942-29218622 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 103

Conread position: 1-294
Cow position: chr2:32499662-32499977 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 70, 155

Conread position: 1-294
Cow position: chr2:33390373-33390083 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 130

Conread position: 1-294
Cow position: chr2:37396359-37396037 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 292

Conread position: 1-294
Cow position: chr2:45936753-45937071 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 42

Conread position: 1-294
Cow position: chr2:49301047-49301365 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 1-294
Cow position: chr2:50565292-50564970 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 15

Conread position: 1-294
Cow position: chr2:54716412-54716094 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 112, 66

Conread position: 1-294
Cow position: chr2:55481247-55481562 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 1-294
Cow position: chr2:72535264-72534940 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 181

Conread position: 1-294
Cow position: chr2:74237686-74238006 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 62, 290

Conread position: 1-294
Cow position: chr2:77468228-77468531 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 45

Conread position: 1-366
Cow position: chr2:41953988-41953596 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 41

Conread position: 1-459
Cow position: chr2:19961293-19960800 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 284

Conread position: 1-459
Cow position: chr2:54699505-54698987 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 359
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 63, 9

Conread position: 1-463
Cow position: chr2:36047339-36047851 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 287

Conread position: 1-467
Cow position: chr2:20856617-20857123 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 293

Conread position: 1-487
Cow position: chr2:817426-816904 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 55

Conread position: 1-487
Cow position: chr2:32659421-32658892 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 180

Conread position: 2-117
Cow position: chr2:43877827-43877712 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr2:53485857-53485998 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 3-200
Cow position: chr2:66218314-66218514 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 114

Conread position: 3-291
Cow position: chr2:28617424-28617728 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 44, 39

Conread position: 3-291
Cow position: chr2:74761863-74761540 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 300

Conread position: 4-229
Cow position: chr2:46940021-46940252 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 119

Conread position: 4-432
Cow position: chr2:28638052-28638513 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 9

Conread position: 8-293
Cow position: chr2:53175296-53174984 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 280

Conread position: 10-470
Cow position: chr2:1693878-1693354 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 364
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 51, 286

Conread position: 13-294
Cow position: chr2:57587116-57587426 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 50, 280

Conread position: 14-204
Cow position: chr2:14825468-14825271 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 22-294
Cow position: chr2:31409924-31410223 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 42, 143

Conread position: 285-458
Cow position: chr2:13005955-13005778 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 104

Conread position: 285-487
Cow position: chr2:72940109-72940316 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 177

Conread position: 296-486
Cow position: chr2:55481585-55481780 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 51

Conread position: 296-487
Cow position: chr2:8529306-8529119 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 60

Conread position: 296-487
Cow position: chr2:57054198-57053997 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 173

Conread position: 296-487
Cow position: chr2:62734803-62734604 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 299-487
Cow position: chr2:29218596-29218413 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 64, 48

Conread position: 316-457
Cow position: chr2:2205227-2205366 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 350-487
Cow position: chr2:35883907-35884040 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 15

Show alignments to all cow chromosomes.