Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-121 |
| Cow position: | chr22:5331348-5331468 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-139 |
| Cow position: | chr22:15869122-15868980 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 1-180 |
| Cow position: | chr22:2531668-2531856 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 1-181 |
| Cow position: | chr22:45106692-45106884 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 164 |
| Conread position: | 1-199 |
| Cow position: | chr22:23582379-23582590 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-204 |
| Cow position: | chr22:1522038-1522257 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-231 |
| Cow position: | chr22:42234209-42233969 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 60, 24 |
| Conread position: | 1-238 |
| Cow position: | chr22:8417687-8417435 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-247 |
| Cow position: | chr22:43789162-43788898 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 66, 202 |
| Conread position: | 1-248 |
| Cow position: | chr22:18188619-18188387 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-248 |
| Cow position: | chr22:23864244-23863983 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-248 |
| Cow position: | chr22:26759395-26759134 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 68, 130 |
| Conread position: | 1-248 |
| Cow position: | chr22:29464326-29464060 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-248 |
| Cow position: | chr22:30963334-30963070 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 1-248 |
| Cow position: | chr22:32894343-32894077 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-248 |
| Cow position: | chr22:33093773-33093516 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 62, 221 |
| Conread position: | 1-248 |
| Cow position: | chr22:38553668-38553405 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-249 |
| Cow position: | chr22:32019127-32019391 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-288 |
| Cow position: | chr22:12869022-12869336 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-291 |
| Cow position: | chr22:20237139-20237458 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 63, 292 |
| Conread position: | 1-291 |
| Cow position: | chr22:24817328-24817645 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 290 |
| Conread position: | 1-292 |
| Cow position: | chr22:10361358-10361040 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 192 |
| Conread position: | 1-293 |
| Cow position: | chr22:11988270-11988592 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-293 |
| Cow position: | chr22:46033660-46033341 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 1-294 |
| Cow position: | chr22:540570-540248 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 1-294 |
| Cow position: | chr22:1036314-1035992 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 60, 292 |
| Conread position: | 1-294 |
| Cow position: | chr22:1517606-1517929 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 297 |
| Conread position: | 1-294 |
| Cow position: | chr22:3270400-3270706 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 112, 178 |
| Conread position: | 1-294 |
| Cow position: | chr22:9371792-9371470 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 291 |
| Conread position: | 1-294 |
| Cow position: | chr22:10330576-10330273 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 163 |
| Conread position: | 1-294 |
| Cow position: | chr22:13721306-13721618 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 1-294 |
| Cow position: | chr22:16203232-16202914 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 61, 175 |
| Conread position: | 1-294 |
| Cow position: | chr22:25942671-25942362 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 54, 246 |
| Conread position: | 1-294 |
| Cow position: | chr22:32220887-32220573 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 1-294 |
| Cow position: | chr22:33448869-33449172 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 60, 24 |
| Conread position: | 1-294 |
| Cow position: | chr22:44924896-44925213 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 167 |
| Conread position: | 1-294 |
| Cow position: | chr22:45845337-45845010 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 1-295 |
| Cow position: | chr22:43261299-43260988 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 1-452 |
| Cow position: | chr22:26167367-26167824 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 1-456 |
| Cow position: | chr22:32660710-32660233 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 188 |
| Conread position: | 1-459 |
| Cow position: | chr22:1310508-1311009 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 256 |
| Conread position: | 1-459 |
| Cow position: | chr22:1625220-1624764 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 324 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 120, 86 |
| Conread position: | 1-459 |
| Cow position: | chr22:12968971-12969481 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 193 |
| Conread position: | 1-485 |
| Cow position: | chr22:6498294-6498802 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 93 |
| Conread position: | 1-487 |
| Cow position: | chr22:29855284-29854740 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 514 |
| Conread position: | 2-246 |
| Cow position: | chr22:15057703-15057452 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 2-247 |
| Cow position: | chr22:5835980-5835724 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 62, 212 |
| Conread position: | 2-294 |
| Cow position: | chr22:31331438-31331759 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 61, 163 |
| Conread position: | 2-294 |
| Cow position: | chr22:36208129-36207819 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 162 |
| Conread position: | 3-194 |
| Cow position: | chr22:13017568-13017771 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 3-247 |
| Cow position: | chr22:30092224-30091973 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 3-248 |
| Cow position: | chr22:29012597-29012332 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-294 |
| Cow position: | chr22:15920403-15920718 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 58, 286 |
| Conread position: | 3-381 |
| Cow position: | chr22:11837993-11838402 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 131 |
| Conread position: | 3-459 |
| Cow position: | chr22:40373818-40373313 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 349 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 3-487 |
| Cow position: | chr22:41946284-41946818 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 288 |
| Conread position: | 4-247 |
| Cow position: | chr22:36503273-36503531 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-294 |
| Cow position: | chr22:5015521-5015200 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 295 |
| Conread position: | 4-294 |
| Cow position: | chr22:28130185-28129866 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 62, 291 |
| Conread position: | 10-293 |
| Cow position: | chr22:8339844-8339531 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 288 |
| Conread position: | 16-293 |
| Cow position: | chr22:39473192-39473502 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 45, 284 |
| Conread position: | 16-294 |
| Cow position: | chr22:36785119-36784827 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 114 |
| Conread position: | 25-287 |
| Cow position: | chr22:8734123-8734411 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 36, 267 |
| Conread position: | 244-487 |
| Cow position: | chr22:44461526-44461272 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 285-487 |
| Cow position: | chr22:12869356-12869565 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 120 |
| Conread position: | 295-483 |
| Cow position: | chr22:9371449-9371252 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 177 |
| Conread position: | 296-443 |
| Cow position: | chr22:29397174-29397024 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 51 |
| Conread position: | 296-459 |
| Cow position: | chr22:38553129-38552964 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 296-460 |
| Cow position: | chr22:11260637-11260806 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 296-483 |
| Cow position: | chr22:3303572-3303760 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 51 |
| Conread position: | 296-487 |
| Cow position: | chr22:11036578-11036391 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 81 |
| Conread position: | 296-487 |
| Cow position: | chr22:11609715-11609534 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 51 |
| Conread position: | 296-487 |
| Cow position: | chr22:17325406-17325593 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 297-443 |
| Cow position: | chr22:5334454-5334598 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 297-487 |
| Cow position: | chr22:46578627-46578822 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 165 |
| Conread position: | 298-487 |
| Cow position: | chr22:13775586-13775394 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 68, 158 |
| Conread position: | 298-487 |
| Cow position: | chr22:25942337-25942154 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 299-452 |
| Cow position: | chr22:15355989-15355831 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 299-487 |
| Cow position: | chr22:13209469-13209275 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 68, 171 |
Show alignments to all cow chromosomes.