Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-145 |
| Cow position: | chr28:14740882-14740739 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-229 |
| Cow position: | chr28:5768425-5768179 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 62, 164 |
| Conread position: | 1-238 |
| Cow position: | chr28:2417258-2417014 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 96 |
| Conread position: | 1-247 |
| Cow position: | chr28:34878975-34879230 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 120, 51 |
| Conread position: | 1-248 |
| Cow position: | chr28:12429679-12429417 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 1-269 |
| Cow position: | chr28:23868713-23868428 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 270 |
| Conread position: | 1-284 |
| Cow position: | chr28:5770494-5770208 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 55, 130 |
| Conread position: | 1-288 |
| Cow position: | chr28:12935799-12936115 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 292 |
| Conread position: | 1-291 |
| Cow position: | chr28:10303312-10302994 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 291 |
| Conread position: | 1-292 |
| Cow position: | chr28:5825324-5825004 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 65, 295 |
| Conread position: | 1-293 |
| Cow position: | chr28:5772883-5772576 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 1-293 |
| Cow position: | chr28:5817096-5816798 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 58, 203 |
| Conread position: | 1-293 |
| Cow position: | chr28:7685467-7685782 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 54, 190 |
| Conread position: | 1-293 |
| Cow position: | chr28:17030623-17030941 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 65, 287 |
| Conread position: | 1-293 |
| Cow position: | chr28:23615619-23615297 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 293 |
| Conread position: | 1-294 |
| Cow position: | chr28:1383978-1384302 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 294 |
| Conread position: | 1-294 |
| Cow position: | chr28:7336458-7336136 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 1-294 |
| Cow position: | chr28:10295274-10294963 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 1-294 |
| Cow position: | chr28:10473433-10473120 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 1-294 |
| Cow position: | chr28:10772551-10772236 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 1-294 |
| Cow position: | chr28:11501747-11502063 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 286 |
| Conread position: | 1-294 |
| Cow position: | chr28:12998152-12997835 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-294 |
| Cow position: | chr28:21362983-21362665 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 60, 168 |
| Conread position: | 1-294 |
| Cow position: | chr28:21896757-21896435 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 292 |
| Conread position: | 1-294 |
| Cow position: | chr28:23309861-23310183 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 1-294 |
| Cow position: | chr28:23675288-23674970 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 289 |
| Conread position: | 1-294 |
| Cow position: | chr28:23794105-23794415 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 1-294 |
| Cow position: | chr28:29435332-29435641 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 65, 156 |
| Conread position: | 1-294 |
| Cow position: | chr28:30098351-30098031 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 294 |
| Conread position: | 1-294 |
| Cow position: | chr28:33640043-33639723 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 294 |
| Conread position: | 1-340 |
| Cow position: | chr28:13373072-13373423 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 49 |
| Conread position: | 1-372 |
| Cow position: | chr28:30870549-30870133 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 294 |
| Conread position: | 1-450 |
| Cow position: | chr28:25762291-25761850 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 1-466 |
| Cow position: | chr28:17602566-17603086 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 354 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 65, 360 |
| Conread position: | 3-247 |
| Cow position: | chr28:25409103-25408846 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 3-248 |
| Cow position: | chr28:14150461-14150197 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-287 |
| Cow position: | chr28:29806968-29807279 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 58, 190 |
| Conread position: | 3-288 |
| Cow position: | chr28:25070320-25070006 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 292 |
| Conread position: | 3-293 |
| Cow position: | chr28:600710-601030 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 291 |
| Conread position: | 3-466 |
| Cow position: | chr28:3745429-3744915 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 349 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 4-294 |
| Cow position: | chr28:28471495-28471178 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 59, 160 |
| Conread position: | 10-294 |
| Cow position: | chr28:13523149-13522838 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 54, 151 |
| Conread position: | 25-294 |
| Cow position: | chr28:958306-958027 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 285-487 |
| Cow position: | chr28:24886001-24885790 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 138 |
| Conread position: | 296-487 |
| Cow position: | chr28:17369210-17369018 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 162 |
| Conread position: | 296-487 |
| Cow position: | chr28:23794438-23794632 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 298-457 |
| Cow position: | chr28:13373676-13373841 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 298-467 |
| Cow position: | chr28:31848806-31848986 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.