Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-159 |
| Cow position: | chr29:27814233-27814067 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 1-187 |
| Cow position: | chr29:19761504-19761307 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-199 |
| Cow position: | chr29:42940424-42940213 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-248 |
| Cow position: | chr29:36209140-36208876 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-248 |
| Cow position: | chr29:43964114-43964378 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 192 |
| Conread position: | 1-283 |
| Cow position: | chr29:2745062-2745366 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 60, 94 |
| Conread position: | 1-291 |
| Cow position: | chr29:36633913-36634223 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 301 |
| Conread position: | 1-292 |
| Cow position: | chr29:30432749-30433066 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 1-293 |
| Cow position: | chr29:45651099-45651415 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 1-294 |
| Cow position: | chr29:45018-45338 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 294 |
| Conread position: | 1-294 |
| Cow position: | chr29:1478897-1478576 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 62, 291 |
| Conread position: | 1-294 |
| Cow position: | chr29:3584772-3585088 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 1-294 |
| Cow position: | chr29:6871838-6872150 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 202 |
| Conread position: | 1-294 |
| Cow position: | chr29:9079351-9079675 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 62, 297 |
| Conread position: | 1-294 |
| Cow position: | chr29:9639083-9639406 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 293 |
| Conread position: | 1-294 |
| Cow position: | chr29:10643969-10644287 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 98 |
| Conread position: | 1-294 |
| Cow position: | chr29:10820269-10820591 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 164 |
| Conread position: | 1-294 |
| Cow position: | chr29:13027663-13027346 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-294 |
| Cow position: | chr29:28696933-28697254 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 296 |
| Conread position: | 1-294 |
| Cow position: | chr29:34780539-34780862 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 293 |
| Conread position: | 1-294 |
| Cow position: | chr29:34794413-34794739 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 62, 300 |
| Conread position: | 1-294 |
| Cow position: | chr29:35739255-35739566 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 57, 172 |
| Conread position: | 1-487 |
| Cow position: | chr29:19657327-19656800 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 289 |
| Conread position: | 1-487 |
| Cow position: | chr29:40618409-40618949 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 288 |
| Conread position: | 2-294 |
| Cow position: | chr29:32289829-32289515 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 49, 171 |
| Conread position: | 2-487 |
| Cow position: | chr29:32353040-32352518 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 265 |
| Conread position: | 3-199 |
| Cow position: | chr29:21445894-21446103 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-239 |
| Cow position: | chr29:960645-960389 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 3-248 |
| Cow position: | chr29:27259439-27259705 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-299 |
| Cow position: | chr29:15943792-15943473 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 58, 287 |
| Conread position: | 4-260 |
| Cow position: | chr29:20999654-20999384 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 191 |
| Conread position: | 10-294 |
| Cow position: | chr29:14037421-14037723 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 53, 93 |
| Conread position: | 296-446 |
| Cow position: | chr29:32893815-32893665 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 51 |
| Conread position: | 296-467 |
| Cow position: | chr29:4200479-4200303 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 296-487 |
| Cow position: | chr29:2430193-2430009 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 296-487 |
| Cow position: | chr29:40294408-40294232 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 300-487 |
| Cow position: | chr29:30412811-30412617 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 68, 163 |
| Conread position: | 350-467 |
| Cow position: | chr29:45429-45547 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 111, 15 |
Show alignments to all cow chromosomes.