Cow genome map
| Conread name: | Pig2-91C13 | 
| Conread position: | 1-124 | 
| Cow position: | chr3:71245955-71245827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 1-138 | 
| Cow position: | chr3:26974280-26974420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 63, 128 | 
| Conread position: | 1-149 | 
| Cow position: | chr3:16156882-16156722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 1-188 | 
| Cow position: | chr3:76136681-76136478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 1-196 | 
| Cow position: | chr3:22220500-22220294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 48, 192 | 
| Conread position: | 1-199 | 
| Cow position: | chr3:33254502-33254711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 60, 192 | 
| Conread position: | 1-199 | 
| Cow position: | chr3:33633679-33633870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 1-199 | 
| Cow position: | chr3:49429410-49429605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 68, 11 | 
| Conread position: | 1-200 | 
| Cow position: | chr3:4017861-4017654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 60, 188 | 
| Conread position: | 1-200 | 
| Cow position: | chr3:25753612-25753402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 1-200 | 
| Cow position: | chr3:34392927-34393139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 1-200 | 
| Cow position: | chr3:70322315-70322525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 57, 170 | 
| Conread position: | 1-204 | 
| Cow position: | chr3:17460576-17460366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 59, 174 | 
| Conread position: | 1-204 | 
| Cow position: | chr3:29582468-29582251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 1-204 | 
| Cow position: | chr3:37600090-37599878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 60, 188 | 
| Conread position: | 1-238 | 
| Cow position: | chr3:64281961-64282213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 1-241 | 
| Cow position: | chr3:43662606-43662352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 66, 118 | 
| Conread position: | 1-244 | 
| Cow position: | chr3:2851886-2852139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 62, 165 | 
| Conread position: | 1-247 | 
| Cow position: | chr3:76187898-76187634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 60, 202 | 
| Conread position: | 1-248 | 
| Cow position: | chr3:173864-173600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 60, 158 | 
| Conread position: | 1-248 | 
| Cow position: | chr3:2904098-2904349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 187 | 
| Conread position: | 1-248 | 
| Cow position: | chr3:19794732-19794998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 1-248 | 
| Cow position: | chr3:22352973-22352711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 1-248 | 
| Cow position: | chr3:25057040-25056786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 112, 27 | 
| Conread position: | 1-248 | 
| Cow position: | chr3:26993484-26993220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 1-248 | 
| Cow position: | chr3:31749036-31748774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 73, 182 | 
| Conread position: | 1-248 | 
| Cow position: | chr3:56697197-56696942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 62, 103 | 
| Conread position: | 1-250 | 
| Cow position: | chr3:38863079-38862821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 133, 87 | 
| Conread position: | 1-288 | 
| Cow position: | chr3:24638765-24638454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 75 | 
| Conread position: | 1-289 | 
| Cow position: | chr3:27454577-27454890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 150 | 
| Conread position: | 1-290 | 
| Cow position: | chr3:36671258-36671579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 1-290 | 
| Cow position: | chr3:68889213-68889530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 62, 92 | 
| Conread position: | 1-291 | 
| Cow position: | chr3:6442428-6442109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 292 | 
| Conread position: | 1-291 | 
| Cow position: | chr3:40004151-40004438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 204, 63 | 
| Conread position: | 1-292 | 
| Cow position: | chr3:16293557-16293869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 60, 164 | 
| Conread position: | 1-292 | 
| Cow position: | chr3:39327905-39327588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 60, 192 | 
| Conread position: | 1-292 | 
| Cow position: | chr3:63202597-63202288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 1-293 | 
| Cow position: | chr3:35884761-35885082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 63, 292 | 
| Conread position: | 1-293 | 
| Cow position: | chr3:37486690-37487003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 60, 191 | 
| Conread position: | 1-293 | 
| Cow position: | chr3:45691691-45691999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 60, 114 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:4039574-4039894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 294 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:16657515-16657829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 59, 287 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:18814865-18814544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 295 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:20475867-20475552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 62, 165 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:23497398-23497720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 60, 292 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:26742513-26742835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 62, 292 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:35918919-35918602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 287 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:46857924-46858246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 292 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:49388008-49387690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 204 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:53047432-53047754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 74, 65 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:53879907-53880229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 292 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:61677894-61677576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 251 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:66736213-66736527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 52, 67 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:68696606-68696927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 184 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:68870390-68870712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 292 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:74847821-74848126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 63, 164 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:78520407-78520085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 62, 292 | 
| Conread position: | 1-294 | 
| Cow position: | chr3:83767605-83767291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 63, 213 | 
| Conread position: | 1-344 | 
| Cow position: | chr3:3031591-3031218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 192 | 
| Conread position: | 1-429 | 
| Cow position: | chr3:19717909-19718354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 60, 170 | 
| Conread position: | 1-457 | 
| Cow position: | chr3:50461669-50461190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 90 | 
| Conread position: | 1-467 | 
| Cow position: | chr3:14285093-14284561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 535 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 199 | 
| Conread position: | 1-474 | 
| Cow position: | chr3:15655956-15656463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 92 | 
| Conread position: | 1-487 | 
| Cow position: | chr3:72390277-72389787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 60, 96 | 
| Conread position: | 2-133 | 
| Cow position: | chr3:57835293-57835429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 2-200 | 
| Cow position: | chr3:52651596-52651793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 67, 128 | 
| Conread position: | 2-288 | 
| Cow position: | chr3:31418892-31418580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 53, 163 | 
| Conread position: | 2-291 | 
| Cow position: | chr3:56160467-56160776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 2-292 | 
| Cow position: | chr3:57742871-57742556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 288 | 
| Conread position: | 2-294 | 
| Cow position: | chr3:45312137-45311830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 59, 128 | 
| Conread position: | 3-191 | 
| Cow position: | chr3:60932623-60932426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 58, 150 | 
| Conread position: | 3-247 | 
| Cow position: | chr3:79595990-79595730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 58, 39 | 
| Conread position: | 3-248 | 
| Cow position: | chr3:13117704-13117959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 156 | 
| Conread position: | 3-252 | 
| Cow position: | chr3:17059110-17059365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 106, 127 | 
| Conread position: | 3-294 | 
| Cow position: | chr3:18886815-18886497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 63, 190 | 
| Conread position: | 3-294 | 
| Cow position: | chr3:25690003-25689693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 15, 33 | 
| Conread position: | 3-295 | 
| Cow position: | chr3:7856779-7856462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 58, 192 | 
| Conread position: | 3-296 | 
| Cow position: | chr3:14466503-14466825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 58, 193 | 
| Conread position: | 16-294 | 
| Cow position: | chr3:2791096-2790789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 281 | 
| Conread position: | 24-487 | 
| Cow position: | chr3:24585894-24586415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 528 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 439 | 
| Conread position: | 26-459 | 
| Cow position: | chr3:69962511-69962977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 174 | 
| Conread position: | 27-294 | 
| Cow position: | chr3:77427012-77426732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 41, 66 | 
| Conread position: | 295-487 | 
| Cow position: | chr3:45184967-45185168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 49, 121 | 
| Conread position: | 296-456 | 
| Cow position: | chr3:20602842-20603012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 296-459 | 
| Cow position: | chr3:53047777-53047944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 296-467 | 
| Cow position: | chr3:31771145-31770968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 63, 89 | 
| Conread position: | 296-469 | 
| Cow position: | chr3:27783291-27783476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 296-471 | 
| Cow position: | chr3:31396389-31396219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 87, 60 | 
| Conread position: | 296-486 | 
| Cow position: | chr3:45692023-45692210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 77, 158 | 
| Conread position: | 296-487 | 
| Cow position: | chr3:19881064-19880865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 78, 169 | 
| Conread position: | 296-487 | 
| Cow position: | chr3:26742858-26743057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 72, 176 | 
| Conread position: | 299-487 | 
| Cow position: | chr3:29644363-29644172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 70, 161 | 
| Conread position: | 304-467 | 
| Cow position: | chr3:77726467-77726302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 70, 79 | 
Show alignments to all cow chromosomes.
