Cow genome map

Conread name: Pig2-91C13

Conread position: 1-124
Cow position: chr3:71245955-71245827 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1-138
Cow position: chr3:26974280-26974420 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 128

Conread position: 1-149
Cow position: chr3:16156882-16156722 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 1-188
Cow position: chr3:76136681-76136478 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 1-196
Cow position: chr3:22220500-22220294 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 192

Conread position: 1-199
Cow position: chr3:33254502-33254711 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 192

Conread position: 1-199
Cow position: chr3:33633679-33633870 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 118, 0

Conread position: 1-199
Cow position: chr3:49429410-49429605 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 68, 11

Conread position: 1-200
Cow position: chr3:4017861-4017654 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 188

Conread position: 1-200
Cow position: chr3:25753612-25753402 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 1-200
Cow position: chr3:34392927-34393139 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1-200
Cow position: chr3:70322315-70322525 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 170

Conread position: 1-204
Cow position: chr3:17460576-17460366 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 174

Conread position: 1-204
Cow position: chr3:29582468-29582251 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-204
Cow position: chr3:37600090-37599878 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 188

Conread position: 1-238
Cow position: chr3:64281961-64282213 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 116, 0

Conread position: 1-241
Cow position: chr3:43662606-43662352 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 118

Conread position: 1-244
Cow position: chr3:2851886-2852139 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 62, 165

Conread position: 1-247
Cow position: chr3:76187898-76187634 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 202

Conread position: 1-248
Cow position: chr3:173864-173600 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 158

Conread position: 1-248
Cow position: chr3:2904098-2904349 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 187

Conread position: 1-248
Cow position: chr3:19794732-19794998 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-248
Cow position: chr3:22352973-22352711 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 1-248
Cow position: chr3:25057040-25056786 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 112, 27

Conread position: 1-248
Cow position: chr3:26993484-26993220 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 1-248
Cow position: chr3:31749036-31748774 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 73, 182

Conread position: 1-248
Cow position: chr3:56697197-56696942 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 62, 103

Conread position: 1-250
Cow position: chr3:38863079-38862821 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 133, 87

Conread position: 1-288
Cow position: chr3:24638765-24638454 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 75

Conread position: 1-289
Cow position: chr3:27454577-27454890 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 150

Conread position: 1-290
Cow position: chr3:36671258-36671579 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 1-290
Cow position: chr3:68889213-68889530 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 92

Conread position: 1-291
Cow position: chr3:6442428-6442109 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 292

Conread position: 1-291
Cow position: chr3:40004151-40004438 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 63

Conread position: 1-292
Cow position: chr3:16293557-16293869 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 164

Conread position: 1-292
Cow position: chr3:39327905-39327588 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 60, 192

Conread position: 1-292
Cow position: chr3:63202597-63202288 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 1-293
Cow position: chr3:35884761-35885082 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 292

Conread position: 1-293
Cow position: chr3:37486690-37487003 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 191

Conread position: 1-293
Cow position: chr3:45691691-45691999 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 60, 114

Conread position: 1-294
Cow position: chr3:4039574-4039894 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 294

Conread position: 1-294
Cow position: chr3:16657515-16657829 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 287

Conread position: 1-294
Cow position: chr3:18814865-18814544 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 295

Conread position: 1-294
Cow position: chr3:20475867-20475552 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 165

Conread position: 1-294
Cow position: chr3:23497398-23497720 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 292

Conread position: 1-294
Cow position: chr3:26742513-26742835 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 292

Conread position: 1-294
Cow position: chr3:35918919-35918602 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 287

Conread position: 1-294
Cow position: chr3:46857924-46858246 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 292

Conread position: 1-294
Cow position: chr3:49388008-49387690 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 204

Conread position: 1-294
Cow position: chr3:53047432-53047754 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 74, 65

Conread position: 1-294
Cow position: chr3:53879907-53880229 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 292

Conread position: 1-294
Cow position: chr3:61677894-61677576 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 251

Conread position: 1-294
Cow position: chr3:66736213-66736527 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 52, 67

Conread position: 1-294
Cow position: chr3:68696606-68696927 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 184

Conread position: 1-294
Cow position: chr3:68870390-68870712 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 292

Conread position: 1-294
Cow position: chr3:74847821-74848126 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 63, 164

Conread position: 1-294
Cow position: chr3:78520407-78520085 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 292

Conread position: 1-294
Cow position: chr3:83767605-83767291 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 63, 213

Conread position: 1-344
Cow position: chr3:3031591-3031218 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 192

Conread position: 1-429
Cow position: chr3:19717909-19718354 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 302
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 60, 170

Conread position: 1-457
Cow position: chr3:50461669-50461190 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 90

Conread position: 1-467
Cow position: chr3:14285093-14284561 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 199

Conread position: 1-474
Cow position: chr3:15655956-15656463 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 92

Conread position: 1-487
Cow position: chr3:72390277-72389787 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 331
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 96

Conread position: 2-133
Cow position: chr3:57835293-57835429 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 2-200
Cow position: chr3:52651596-52651793 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 128

Conread position: 2-288
Cow position: chr3:31418892-31418580 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 163

Conread position: 2-291
Cow position: chr3:56160467-56160776 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 2-292
Cow position: chr3:57742871-57742556 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 288

Conread position: 2-294
Cow position: chr3:45312137-45311830 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 128

Conread position: 3-191
Cow position: chr3:60932623-60932426 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 150

Conread position: 3-247
Cow position: chr3:79595990-79595730 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 203
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 58, 39

Conread position: 3-248
Cow position: chr3:13117704-13117959 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 156

Conread position: 3-252
Cow position: chr3:17059110-17059365 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 127

Conread position: 3-294
Cow position: chr3:18886815-18886497 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 63, 190

Conread position: 3-294
Cow position: chr3:25690003-25689693 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 15, 33

Conread position: 3-295
Cow position: chr3:7856779-7856462 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 58, 192

Conread position: 3-296
Cow position: chr3:14466503-14466825 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 193

Conread position: 16-294
Cow position: chr3:2791096-2790789 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 281

Conread position: 24-487
Cow position: chr3:24585894-24586415 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 439

Conread position: 26-459
Cow position: chr3:69962511-69962977 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 174

Conread position: 27-294
Cow position: chr3:77427012-77426732 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 66

Conread position: 295-487
Cow position: chr3:45184967-45185168 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 121

Conread position: 296-456
Cow position: chr3:20602842-20603012 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 296-459
Cow position: chr3:53047777-53047944 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 296-467
Cow position: chr3:31771145-31770968 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 89

Conread position: 296-469
Cow position: chr3:27783291-27783476 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 296-471
Cow position: chr3:31396389-31396219 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 60

Conread position: 296-486
Cow position: chr3:45692023-45692210 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 77, 158

Conread position: 296-487
Cow position: chr3:19881064-19880865 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 169

Conread position: 296-487
Cow position: chr3:26742858-26743057 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 176

Conread position: 299-487
Cow position: chr3:29644363-29644172 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 70, 161

Conread position: 304-467
Cow position: chr3:77726467-77726302 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 79

Show alignments to all cow chromosomes.