Cow genome map
| Conread name: | Pig2-91C13 |
| Conread position: | 1-121 |
| Cow position: | chr4:61065836-61065716 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-151 |
| Cow position: | chr4:5882640-5882477 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-174 |
| Cow position: | chr4:22237252-22237428 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 1-182 |
| Cow position: | chr4:4126899-4126708 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-188 |
| Cow position: | chr4:3129020-3128821 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-198 |
| Cow position: | chr4:63195415-63195624 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-203 |
| Cow position: | chr4:11026058-11026267 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 117, 64 |
| Conread position: | 1-204 |
| Cow position: | chr4:43896332-43896559 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-232 |
| Cow position: | chr4:46667823-46667577 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 60, 155 |
| Conread position: | 1-240 |
| Cow position: | chr4:61724403-61724147 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 65, 164 |
| Conread position: | 1-248 |
| Cow position: | chr4:3252387-3252645 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 226 |
| Conread position: | 1-248 |
| Cow position: | chr4:3284193-3284459 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-248 |
| Cow position: | chr4:33181121-33181389 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 68, 119 |
| Conread position: | 1-248 |
| Cow position: | chr4:61449678-61449412 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-248 |
| Cow position: | chr4:68795870-68795611 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 11, 117 |
| Conread position: | 1-249 |
| Cow position: | chr4:55670404-55670147 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 1-288 |
| Cow position: | chr4:22850510-22850822 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 206 |
| Conread position: | 1-293 |
| Cow position: | chr4:1499926-1500228 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 265 |
| Conread position: | 1-293 |
| Cow position: | chr4:4086205-4086518 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 235 |
| Conread position: | 1-294 |
| Cow position: | chr4:1927470-1927792 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 1-294 |
| Cow position: | chr4:5610846-5611157 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 1-294 |
| Cow position: | chr4:5874244-5873945 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 59 |
| Conread position: | 1-294 |
| Cow position: | chr4:9357403-9357081 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 289 |
| Conread position: | 1-294 |
| Cow position: | chr4:14919201-14918900 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 86 |
| Conread position: | 1-294 |
| Cow position: | chr4:18844963-18844651 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 60, 96 |
| Conread position: | 1-294 |
| Cow position: | chr4:26468392-26468075 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 1-294 |
| Cow position: | chr4:37786464-37786145 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 1-294 |
| Cow position: | chr4:41962061-41961739 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 1-294 |
| Cow position: | chr4:65581684-65581358 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-367 |
| Cow position: | chr4:29034769-29034378 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 9 |
| Conread position: | 1-457 |
| Cow position: | chr4:38180919-38180410 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 352 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 53, 169 |
| Conread position: | 1-462 |
| Cow position: | chr4:38909665-38909148 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 343 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-467 |
| Cow position: | chr4:54758090-54758601 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 354 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 62, 227 |
| Conread position: | 1-487 |
| Cow position: | chr4:3070074-3069541 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 377 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 63, 165 |
| Conread position: | 1-487 |
| Cow position: | chr4:12605715-12606258 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 2-248 |
| Cow position: | chr4:34700393-34700652 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 120, 185 |
| Conread position: | 2-294 |
| Cow position: | chr4:7214612-7214934 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 48, 41 |
| Conread position: | 2-294 |
| Cow position: | chr4:19237231-19236912 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 2-294 |
| Cow position: | chr4:19264832-19264523 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 126 |
| Conread position: | 2-294 |
| Cow position: | chr4:44593238-44593549 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 59, 172 |
| Conread position: | 2-298 |
| Cow position: | chr4:12751528-12751207 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 318 |
| Conread position: | 2-306 |
| Cow position: | chr4:54973214-54972883 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 59, 291 |
| Conread position: | 3-204 |
| Cow position: | chr4:32249657-32249439 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 105 |
| Conread position: | 3-248 |
| Cow position: | chr4:8673885-8673637 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 191, 66 |
| Conread position: | 3-248 |
| Cow position: | chr4:8769202-8768942 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 12, 168 |
| Conread position: | 3-248 |
| Cow position: | chr4:17833683-17833941 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-248 |
| Cow position: | chr4:25226134-25225885 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 115 |
| Conread position: | 3-248 |
| Cow position: | chr4:34175819-34176085 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-248 |
| Cow position: | chr4:46530090-46530346 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 59, 116 |
| Conread position: | 3-295 |
| Cow position: | chr4:9796190-9796509 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 289 |
| Conread position: | 3-487 |
| Cow position: | chr4:32937-33466 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 5-204 |
| Cow position: | chr4:11201029-11200815 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 5-294 |
| Cow position: | chr4:16967141-16967436 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 61, 93 |
| Conread position: | 8-287 |
| Cow position: | chr4:23525737-23525431 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 9-427 |
| Cow position: | chr4:34181590-34182034 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 65 |
| Conread position: | 13-294 |
| Cow position: | chr4:23451867-23452169 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 52, 188 |
| Conread position: | 16-293 |
| Cow position: | chr4:30508348-30508048 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 20-459 |
| Cow position: | chr4:59783822-59783350 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 272 |
| Conread position: | 25-185 |
| Cow position: | chr4:51014201-51014032 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 84 |
| Conread position: | 25-487 |
| Cow position: | chr4:35868335-35867836 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 334 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 39, 278 |
| Conread position: | 26-246 |
| Cow position: | chr4:34166896-34167133 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 52-445 |
| Cow position: | chr4:50977637-50977207 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 57-469 |
| Cow position: | chr4:66670084-66670517 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 277-466 |
| Cow position: | chr4:26468071-26467881 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 111 |
| Conread position: | 296-459 |
| Cow position: | chr4:6168150-6168324 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 296-479 |
| Cow position: | chr4:8559486-8559673 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 162 |
| Conread position: | 296-487 |
| Cow position: | chr4:16062109-16061915 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 72, 164 |
| Conread position: | 296-487 |
| Cow position: | chr4:46711786-46711977 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 297-487 |
| Cow position: | chr4:35929301-35929100 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 53, 101 |
| Conread position: | 299-487 |
| Cow position: | chr4:44593574-44593756 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 84, 67 |
Show alignments to all cow chromosomes.