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Cow genome map

           
Conread name:
           
Pig2-92G10
        

               
Conread position:
               
1-349
               

               
Cow position:
               
chr11:439984-439628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 177
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr11:45277480-45277086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr11:46329174-46329565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr11:70609465-70609876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr11:81931394-81931184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr11:84891067-84890809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr11:62750074-62749774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
47, 223
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr11:33364024-33364334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr11:41577329-41577021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 139
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr11:48901394-48901084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr11:71846673-71846346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 311
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr11:18067165-18066819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr11:17860478-17860139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 263
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr11:83196177-83196517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 313
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr11:81174566-81174913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 275
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr11:43644425-43644071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 141
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr11:42836284-42835895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr11:50236293-50235921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 225
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr11:4732014-4732406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr11:24967141-24967510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr11:46746308-46746702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 168
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr11:4206974-4207384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 249
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr11:55744149-55744540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 154
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr11:61454859-61454444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 253
               

               
Conread position:
               
2-386
               

               
Cow position:
               
chr11:41812236-41811841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 117
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr11:22978187-22977798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 146
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr11:5032101-5031699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 287
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr11:35881582-35881987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 330
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr11:58588019-58588422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 239
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:16233236-16232856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
260, 18
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:20601915-20602305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 138
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:31352895-31352473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:34112939-34113344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 129
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:38638801-38639190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:63847527-63847925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 196
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:67246482-67246864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:68905374-68904998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr11:76606365-76606751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
2-430
               

               
Cow position:
               
chr11:8841067-8840632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 224
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr11:40486246-40485791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr11:43524299-43524673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr11:2092024-2092403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 70
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr11:51144396-51144792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 214
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr11:58990187-58990571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 216
               

               
Conread position:
               
3-439
               

               
Cow position:
               
chr11:42003276-42002808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 283
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr11:16795470-16795252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr11:55117151-55117388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr11:22103440-22103665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr11:37118162-37118414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
4-251
               

               
Cow position:
               
chr11:58140316-58140567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 155
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr11:10641062-10640810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr11:5481820-5481559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr11:44153456-44153201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr11:51208094-51208351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr11:25336749-25337011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 220
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr11:34412777-34413033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr11:55347943-55348202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
4-257
               

               
Cow position:
               
chr11:61137520-61137261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr11:46398800-46399065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 174
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr11:35275973-35276253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 206
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr11:81066904-81066614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr11:43913900-43914197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr11:64932620-64932310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr11:49105731-49106043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr11:64334535-64334840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr11:955042-955363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr11:41239594-41239270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 290
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr11:50197767-50197434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 277
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr11:68570994-68570670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
4-321
               

               
Cow position:
               
chr11:67951279-67950969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr11:47165456-47165135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr11:82232101-82232427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 138
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr11:16251576-16251234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 168
               

               
Conread position:
               
4-329
               

               
Cow position:
               
chr11:86926244-86925929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 143
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr11:8827458-8827794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr11:2309550-2309889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 168
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr11:11752837-11752501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr11:59156197-59155862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr11:62979155-62979506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr11:1486191-1485858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 266
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr11:64029578-64029246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 228
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr11:18389183-18388847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr11:6154092-6154440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr11:8339727-8339371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 220
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr11:66897122-66896756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr11:4323044-4323407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr11:26483399-26483760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr11:19787826-19788172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr11:33294114-33293723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 284
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr11:37974603-37974990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr11:44576061-44575689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr11:51755993-51756355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 237
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr11:70383017-70382633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 227
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr11:77751088-77750713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr11:64043927-64044293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr11:51044256-51043872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr11:70745858-70745468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 233
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr11:8495715-8496098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:17890045-17889662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 245
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:77705442-77705817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr11:84385959-84385572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr11:65409484-65409086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr11:3393532-3393141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr11:25386748-25387137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 111
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr11:30191841-30192247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr11:35684821-35684432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 280
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr11:47566276-47565869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
45, 313
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr11:68207170-68206773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 247
               

               
Conread position:
               
4-383
               

               
Cow position:
               
chr11:70484184-70483780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr11:23251926-23251520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr11:30165178-30165582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr11:68910175-68909782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr11:76369841-76369448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr11:32749785-32750184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr11:33350024-33349627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 259
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr11:33413911-33414310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 173
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr11:34615946-34616333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 243
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr11:40467446-40467050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 269
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr11:61202831-61203239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr11:7924907-7924518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr11:38235915-38236327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr11:40793023-40792629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 169
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr11:54334010-54334404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:7394842-7395206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
187, 41
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:18086660-18086271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:25792015-25791618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 244
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:30879355-30879744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 232
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:53778294-53778693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:67746955-67747361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr11:70838625-70838213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 398
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:17321339-17321728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 246
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:44637083-44636676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr11:59702162-59702568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 235
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:17831555-17831143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:27248170-27248569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 285
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:35363173-35363560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 266
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:35579932-35580339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:40458799-40459186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:41271820-41272216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:41809799-41809414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 220
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:43361121-43360705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:44031677-44032090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 237
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:50153140-50152735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:61427292-61427671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:69118977-69119372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 219
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:73512742-73512364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:73924881-73924483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 208
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:76114330-76114721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 241
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr11:80923658-80923245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr11:30120985-30120574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
4-435
               

               
Cow position:
               
chr11:21852606-21852179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
4-459
               

               
Cow position:
               
chr11:53130493-53130958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
4-461
               

               
Cow position:
               
chr11:64638845-64638373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
5-318
               

               
Cow position:
               
chr11:31866278-31866600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
5-370
               

               
Cow position:
               
chr11:77759078-77758703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr11:42358803-42359177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 154
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr11:37292536-37292801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr11:74929460-74929725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr11:19890562-19890811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
6-328
               

               
Cow position:
               
chr11:4412340-4412012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 250
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr11:10076454-10076784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr11:62490113-62490473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 197
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr11:80761697-80761305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr11:10213876-10213490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr11:17278981-17278597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr11:30934099-30934495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 102
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr11:49935064-49934652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
7-388
               

               
Cow position:
               
chr11:78381363-78380989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr11:36986644-36987026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
9-368
               

               
Cow position:
               
chr11:287651-287280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
9-386
               

               
Cow position:
               
chr11:6835215-6835607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr11:35238512-35238769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
10-389
               

               
Cow position:
               
chr11:63157227-63156842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
11-391
               

               
Cow position:
               
chr11:23232828-23232441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
12-305
               

               
Cow position:
               
chr11:21819752-21819454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
12-317
               

               
Cow position:
               
chr11:62965870-62965549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
12-328
               

               
Cow position:
               
chr11:37068618-37068307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
12-391
               

               
Cow position:
               
chr11:34962748-34963148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr11:10294283-10294493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
13-249
               

               
Cow position:
               
chr11:52464129-52464360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 143
               

               
Conread position:
               
13-254
               

               
Cow position:
               
chr11:46451305-46451542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
13-259
               

               
Cow position:
               
chr11:50111878-50112129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
13-313
               

               
Cow position:
               
chr11:81614942-81614645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
13-329
               

               
Cow position:
               
chr11:9837414-9837088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
13-329
               

               
Cow position:
               
chr11:60302271-60301950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 228
               

               
Conread position:
               
13-329
               

               
Cow position:
               
chr11:73478310-73478619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 253
               

               
Conread position:
               
13-331
               

               
Cow position:
               
chr11:49211146-49210827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr11:5197388-5197055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
13-370
               

               
Cow position:
               
chr11:39115184-39115551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr11:56518623-56518241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
13-385
               

               
Cow position:
               
chr11:21894464-21894089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
13-386
               

               
Cow position:
               
chr11:5075524-5075154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr11:13499701-13500091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
13-389
               

               
Cow position:
               
chr11:48649641-48650049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 273
               

               
Conread position:
               
13-389
               

               
Cow position:
               
chr11:82796589-82796212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr11:8525419-8525036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr11:18698560-18698958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr11:28643768-28644166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr11:39499063-39499435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 130
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr11:43897822-43898217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 206
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr11:48271882-48272279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr11:58399956-58400327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr11:59872613-59873007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 345
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr11:65495641-65495261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr11:58600551-58600779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
14-279
               

               
Cow position:
               
chr11:57047275-57047010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
14-300
               

               
Cow position:
               
chr11:4384313-4384601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
14-317
               

               
Cow position:
               
chr11:81605325-81605627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
14-339
               

               
Cow position:
               
chr11:17112939-17112608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
14-361
               

               
Cow position:
               
chr11:15503789-15504161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 289
               

               
Conread position:
               
14-370
               

               
Cow position:
               
chr11:29916234-29916599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
14-370
               

               
Cow position:
               
chr11:67931803-67931435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
14-377
               

               
Cow position:
               
chr11:80788223-80787842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
14-381
               

               
Cow position:
               
chr11:13061531-13061167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
14-384
               

               
Cow position:
               
chr11:1625531-1625152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 140
               

               
Conread position:
               
14-385
               

               
Cow position:
               
chr11:3769599-3769236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
14-386
               

               
Cow position:
               
chr11:18588892-18588512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 206
               

               
Conread position:
               
14-386
               

               
Cow position:
               
chr11:32595154-32595531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 197
               

               
Conread position:
               
14-388
               

               
Cow position:
               
chr11:18509321-18508955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
14-391
               

               
Cow position:
               
chr11:18572494-18572879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
14-391
               

               
Cow position:
               
chr11:42083171-42083547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 145
               

               
Conread position:
               
15-317
               

               
Cow position:
               
chr11:47586659-47586351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 114
               

               
Conread position:
               
15-317
               

               
Cow position:
               
chr11:79995131-79994822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
15-370
               

               
Cow position:
               
chr11:39118477-39118815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
15-381
               

               
Cow position:
               
chr11:1071405-1071022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 182
               

               
Conread position:
               
15-381
               

               
Cow position:
               
chr11:3833659-3833295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
15-389
               

               
Cow position:
               
chr11:41986355-41985969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 205
               

               
Conread position:
               
15-391
               

               
Cow position:
               
chr11:35874284-35873924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 19
               

               
Conread position:
               
15-391
               

               
Cow position:
               
chr11:63469574-63469954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr11:62376747-62376521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 151
               

               
Conread position:
               
16-371
               

               
Cow position:
               
chr11:71868914-71868544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 130
               

               
Conread position:
               
16-372
               

               
Cow position:
               
chr11:71168888-71168530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
16-391
               

               
Cow position:
               
chr11:80820309-80819926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 233
               

               
Conread position:
               
17-332
               

               
Cow position:
               
chr11:31930384-31930699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
17-381
               

               
Cow position:
               
chr11:36182379-36182763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 151
               

               
Conread position:
               
17-388
               

               
Cow position:
               
chr11:46748178-46747785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 239
               

               
Conread position:
               
17-391
               

               
Cow position:
               
chr11:62151191-62150815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 133
               

               
Conread position:
               
18-329
               

               
Cow position:
               
chr11:32609686-32610008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
19-255
               

               
Cow position:
               
chr11:7315432-7315191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
19-378
               

               
Cow position:
               
chr11:77766904-77766529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr11:56797042-56796740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
20-349
               

               
Cow position:
               
chr11:27386646-27386304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 139
               

               
Conread position:
               
20-382
               

               
Cow position:
               
chr11:70272997-70273376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
21-192
               

               
Cow position:
               
chr11:78480489-78480673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
21-391
               

               
Cow position:
               
chr11:28692059-28691676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
21-391
               

               
Cow position:
               
chr11:50072668-50073016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 19
               

               
Conread position:
               
21-391
               

               
Cow position:
               
chr11:52297529-52297142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 290
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr11:6620596-6620378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
22-372
               

               
Cow position:
               
chr11:33754205-33753849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
22-391
               

               
Cow position:
               
chr11:73354357-73353981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
23-323
               

               
Cow position:
               
chr11:85764650-85764940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
24-381
               

               
Cow position:
               
chr11:26256698-26256343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
25-363
               

               
Cow position:
               
chr11:26535473-26535817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 176
               

               
Conread position:
               
25-391
               

               
Cow position:
               
chr11:48496868-48496514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr11:53719648-53719893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
27-317
               

               
Cow position:
               
chr11:65857558-65857859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
27-386
               

               
Cow position:
               
chr11:36981270-36981637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 121
               

               
Conread position:
               
27-391
               

               
Cow position:
               
chr11:31227700-31228041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
28-317
               

               
Cow position:
               
chr11:62016566-62016282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
28-371
               

               
Cow position:
               
chr11:85723403-85723756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
29-315
               

               
Cow position:
               
chr11:1485658-1485362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 242
               

               
Conread position:
               
29-380
               

               
Cow position:
               
chr11:87155215-87155587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
30-226
               

               
Cow position:
               
chr11:6639215-6639416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 125
               

               
Conread position:
               
30-349
               

               
Cow position:
               
chr11:65430768-65431089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
31-381
               

               
Cow position:
               
chr11:34467307-34467635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
31-386
               

               
Cow position:
               
chr11:3719956-3720327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 190
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr11:38071081-38071372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr11:13190927-13191236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 239
               

               
Conread position:
               
34-368
               

               
Cow position:
               
chr11:21497247-21497578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
6, 130
               

               
Conread position:
               
34-370
               

               
Cow position:
               
chr11:30720805-30721156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
35-314
               

               
Cow position:
               
chr11:58459840-58460107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
37-370
               

               
Cow position:
               
chr11:81300900-81300563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
37-391
               

               
Cow position:
               
chr11:45646878-45646515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
38-317
               

               
Cow position:
               
chr11:8105496-8105784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 216
               

               
Conread position:
               
38-400
               

               
Cow position:
               
chr11:20491287-20491653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 259
               

               
Conread position:
               
39-361
               

               
Cow position:
               
chr11:30708218-30708555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
39-379
               

               
Cow position:
               
chr11:38845548-38845196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 168
               

               
Conread position:
               
40-242
               

               
Cow position:
               
chr11:85189669-85189459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 182
               

               
Conread position:
               
40-365
               

               
Cow position:
               
chr11:67804468-67804802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 222
               

               
Conread position:
               
40-366
               

               
Cow position:
               
chr11:63518731-63519053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr11:65827016-65826682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
40-390
               

               
Cow position:
               
chr11:24601682-24602038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 217
               

               
Conread position:
               
40-391
               

               
Cow position:
               
chr11:29947211-29946835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
40-450
               

               
Cow position:
               
chr11:65445115-65444698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
41-260
               

               
Cow position:
               
chr11:25165162-25165383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
41-349
               

               
Cow position:
               
chr11:14649596-14649279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr11:2788096-2788452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 250
               

               
Conread position:
               
41-392
               

               
Cow position:
               
chr11:8988513-8988151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 157
               

               
Conread position:
               
43-320
               

               
Cow position:
               
chr11:77207767-77208044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 171
               

               
Conread position:
               
43-389
               

               
Cow position:
               
chr11:6234160-6233803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 161
               

               
Conread position:
               
43-391
               

               
Cow position:
               
chr11:12111749-12111380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 156
               

               
Conread position:
               
43-391
               

               
Cow position:
               
chr11:83230666-83230322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
44-252
               

               
Cow position:
               
chr11:10127894-10127691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
44-253
               

               
Cow position:
               
chr11:39162996-39163214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
44-267
               

               
Cow position:
               
chr11:57111588-57111359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
44-331
               

               
Cow position:
               
chr11:58614380-58614673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
34, 245
               

               
Conread position:
               
44-334
               

               
Cow position:
               
chr11:77682899-77683185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
44-347
               

               
Cow position:
               
chr11:9088575-9088276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
44-353
               

               
Cow position:
               
chr11:37347195-37347512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
44-360
               

               
Cow position:
               
chr11:70459294-70459603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
44-361
               

               
Cow position:
               
chr11:4436052-4436368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
44-377
               

               
Cow position:
               
chr11:70303806-70304134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
44-381
               

               
Cow position:
               
chr11:20761565-20761911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 315
               

               
Conread position:
               
44-381
               

               
Cow position:
               
chr11:56654268-56654624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
44-381
               

               
Cow position:
               
chr11:74316426-74316778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
44-390
               

               
Cow position:
               
chr11:48428814-48429186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
44-391
               

               
Cow position:
               
chr11:23128816-23128461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 106
               

               
Conread position:
               
44-391
               

               
Cow position:
               
chr11:23138341-23137975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 216
               

               
Conread position:
               
44-391
               

               
Cow position:
               
chr11:44642566-44642213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 209
               

               
Conread position:
               
44-391
               

               
Cow position:
               
chr11:60470460-60470119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
44-391
               

               
Cow position:
               
chr11:65987950-65988302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 237
               

               
Conread position:
               
45-259
               

               
Cow position:
               
chr11:70163620-70163844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 154
               

               
Conread position:
               
45-260
               

               
Cow position:
               
chr11:19508017-19508236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
45-299
               

               
Cow position:
               
chr11:81143838-81143571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 245
               

               
Conread position:
               
45-311
               

               
Cow position:
               
chr11:35148889-35149155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
45-317
               

               
Cow position:
               
chr11:77241101-77241369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 26
               

               
Conread position:
               
45-318
               

               
Cow position:
               
chr11:30110692-30110962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 138
               

               
Conread position:
               
45-334
               

               
Cow position:
               
chr11:38193872-38194173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
45-348
               

               
Cow position:
               
chr11:22932241-22931937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
45-375
               

               
Cow position:
               
chr11:1668395-1668732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr11:7589911-7590255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 234
               

               
Conread position:
               
45-380
               

               
Cow position:
               
chr11:40258677-40258344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 106
               

               
Conread position:
               
45-380
               

               
Cow position:
               
chr11:55333628-55333977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 240
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr11:14308359-14308707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr11:41549609-41549263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 37
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr11:83043640-83043294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
45-382
               

               
Cow position:
               
chr11:10620605-10620258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
45-386
               

               
Cow position:
               
chr11:77745533-77745178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
45-389
               

               
Cow position:
               
chr11:33526797-33527129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
45-389
               

               
Cow position:
               
chr11:48474429-48474780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
45-390
               

               
Cow position:
               
chr11:9222005-9221654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 167
               

               
Conread position:
               
45-390
               

               
Cow position:
               
chr11:11125383-11125741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr11:3282779-3283102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr11:13040439-13040093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 152
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr11:18484439-18484110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr11:21844412-21844060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 205
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr11:43430726-43430378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr11:55761600-55761947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr11:67600488-67600863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr11:80530091-80530437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr11:83066216-83066566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
46-248
               

               
Cow position:
               
chr11:31885239-31885447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
46-301
               

               
Cow position:
               
chr11:75748157-75748417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 170
               

               
Conread position:
               
46-390
               

               
Cow position:
               
chr11:30475721-30476076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 199
               

               
Conread position:
               
46-391
               

               
Cow position:
               
chr11:1362759-1362389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
46-391
               

               
Cow position:
               
chr11:2281565-2281246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 111
               

               
Conread position:
               
46-391
               

               
Cow position:
               
chr11:34830058-34829707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
46-439
               

               
Cow position:
               
chr11:32377909-32378321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
47-245
               

               
Cow position:
               
chr11:79019793-79019597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 80
               

               
Conread position:
               
47-260
               

               
Cow position:
               
chr11:51688003-51687784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
47-309
               

               
Cow position:
               
chr11:58103052-58102784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 177
               

               
Conread position:
               
47-383
               

               
Cow position:
               
chr11:17192559-17192210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 252
               

               
Conread position:
               
47-389
               

               
Cow position:
               
chr11:10388874-10388548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr11:62880902-62880523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
48-252
               

               
Cow position:
               
chr11:81137945-81138156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
48-381
               

               
Cow position:
               
chr11:33341422-33341076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
48-389
               

               
Cow position:
               
chr11:18244218-18243865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
28, 212
               

               
Conread position:
               
48-447
               

               
Cow position:
               
chr11:48697171-48697583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 194
               

               
Conread position:
               
49-249
               

               
Cow position:
               
chr11:48232467-48232663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
49-260
               

               
Cow position:
               
chr11:75355334-75355549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 193
               

               
Conread position:
               
49-283
               

               
Cow position:
               
chr11:27462660-27462427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
49-343
               

               
Cow position:
               
chr11:42793246-42792944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
49-381
               

               
Cow position:
               
chr11:10992004-10992335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 218
               

               
Conread position:
               
49-388
               

               
Cow position:
               
chr11:62155355-62155714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 77
               

               
Conread position:
               
49-389
               

               
Cow position:
               
chr11:13043412-13043069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
49-391
               

               
Cow position:
               
chr11:377926-377563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
50-227
               

               
Cow position:
               
chr11:64356995-64357168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr11:71455513-71455788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 254
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr11:6400346-6400056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
50-334
               

               
Cow position:
               
chr11:48932857-48932571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 222
               

               
Conread position:
               
50-339
               

               
Cow position:
               
chr11:36496580-36496865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
50-350
               

               
Cow position:
               
chr11:18210623-18210312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr11:52381145-52380811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr11:17227914-17227576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
50-385
               

               
Cow position:
               
chr11:79728948-79728595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
50-391
               

               
Cow position:
               
chr11:30354793-30355137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 168
               

               
Conread position:
               
50-391
               

               
Cow position:
               
chr11:45632039-45631687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 277
               

               
Conread position:
               
51-335
               

               
Cow position:
               
chr11:53773399-53773698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
51-370
               

               
Cow position:
               
chr11:44818823-44819151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 220
               

               
Conread position:
               
51-381
               

               
Cow position:
               
chr11:30912265-30911935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 169
               

               
Conread position:
               
51-386
               

               
Cow position:
               
chr11:10302462-10302129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
51-391
               

               
Cow position:
               
chr11:11232728-11232377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
52-225
               

               
Cow position:
               
chr11:5790188-5790008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 167
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chr11:12555690-12555412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
53-317
               

               
Cow position:
               
chr11:41983718-41983458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
53-381
               

               
Cow position:
               
chr11:50778098-50778436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 227
               

               
Conread position:
               
53-385
               

               
Cow position:
               
chr11:66041002-66041351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
53-391
               

               
Cow position:
               
chr11:36112150-36112498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
53-391
               

               
Cow position:
               
chr11:49148778-49149128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
53-391
               

               
Cow position:
               
chr11:62663504-62663156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
54-379
               

               
Cow position:
               
chr11:7415116-7414809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
54-381
               

               
Cow position:
               
chr11:44222630-44222954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
54-388
               

               
Cow position:
               
chr11:19247466-19247124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 186
               

               
Conread position:
               
55-300
               

               
Cow position:
               
chr11:59370745-59370996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
55-335
               

               
Cow position:
               
chr11:38810620-38810332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 235
               

               
Conread position:
               
55-393
               

               
Cow position:
               
chr11:45898325-45897969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
55-404
               

               
Cow position:
               
chr11:65159715-65159362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
56-261
               

               
Cow position:
               
chr11:84924364-84924153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 200
               

               
Conread position:
               
56-334
               

               
Cow position:
               
chr11:24584911-24585197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
56-380
               

               
Cow position:
               
chr11:34032464-34032135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
56-391
               

               
Cow position:
               
chr11:8148152-8147820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
56-391
               

               
Cow position:
               
chr11:55052604-55052950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
26, 176
               

               
Conread position:
               
58-260
               

               
Cow position:
               
chr11:57061610-57061820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
58-362
               

               
Cow position:
               
chr11:30596730-30597043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
59-221
               

               
Cow position:
               
chr11:15608558-15608389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
59-317
               

               
Cow position:
               
chr11:62045133-62045395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
59-378
               

               
Cow position:
               
chr11:16262297-16261959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
59-381
               

               
Cow position:
               
chr11:36799561-36799238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
59-391
               

               
Cow position:
               
chr11:32439214-32438873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
59-452
               

               
Cow position:
               
chr11:11460232-11460642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
60-381
               

               
Cow position:
               
chr11:47544863-47545200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
60-385
               

               
Cow position:
               
chr11:36194028-36194369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
60-385
               

               
Cow position:
               
chr11:63482690-63482357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr11:2832929-2832616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
60-391
               

               
Cow position:
               
chr11:27746653-27747002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 230
               

               
Conread position:
               
61-381
               

               
Cow position:
               
chr11:22499614-22499298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
62-348
               

               
Cow position:
               
chr11:83587779-83588061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
62-370
               

               
Cow position:
               
chr11:30764217-30764548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 236
               

               
Conread position:
               
62-391
               

               
Cow position:
               
chr11:70836630-70836298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
63-384
               

               
Cow position:
               
chr11:83397643-83397977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
64-254
               

               
Cow position:
               
chr11:31525604-31525804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
64-258
               

               
Cow position:
               
chr11:70651705-70651508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
64-327
               

               
Cow position:
               
chr11:171957-171694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 152
               

               
Conread position:
               
64-377
               

               
Cow position:
               
chr11:2917837-2917521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
65-380
               

               
Cow position:
               
chr11:45889694-45890026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
66-361
               

               
Cow position:
               
chr11:56728688-56728998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
66-370
               

               
Cow position:
               
chr11:41426655-41426959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 183
               

               
Conread position:
               
67-309
               

               
Cow position:
               
chr11:40860969-40860723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
68-364
               

               
Cow position:
               
chr11:36113902-36114205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
68-391
               

               
Cow position:
               
chr11:64904742-64905076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 227
               

               
Conread position:
               
69-385
               

               
Cow position:
               
chr11:2509546-2509233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
195, 18
               

               
Conread position:
               
70-391
               

               
Cow position:
               
chr11:62620136-62620455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 13
               

               
Conread position:
               
71-361
               

               
Cow position:
               
chr11:81281694-81282006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
71-374
               

               
Cow position:
               
chr11:34120947-34121259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 169
               

               
Conread position:
               
71-386
               

               
Cow position:
               
chr11:36940851-36940522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
72-317
               

               
Cow position:
               
chr11:62808897-62808653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 198
               

               
Conread position:
               
72-371
               

               
Cow position:
               
chr11:75480274-75479965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
73-267
               

               
Cow position:
               
chr11:27722114-27722310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 175
               

               
Conread position:
               
73-317
               

               
Cow position:
               
chr11:63516576-63516826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
73-335
               

               
Cow position:
               
chr11:25620643-25620380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
118, 141
               

               
Conread position:
               
73-391
               

               
Cow position:
               
chr11:20238425-20238755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
74-391
               

               
Cow position:
               
chr11:4663286-4662968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
75-369
               

               
Cow position:
               
chr11:18341284-18340984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
77-377
               

               
Cow position:
               
chr11:48544199-48544502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 75
               

               
Conread position:
               
77-386
               

               
Cow position:
               
chr11:57725072-57724751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 200
               

               
Conread position:
               
77-391
               

               
Cow position:
               
chr11:82940861-82940546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
78-252
               

               
Cow position:
               
chr11:63520530-63520705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
78-254
               

               
Cow position:
               
chr11:41438467-41438285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
78-276
               

               
Cow position:
               
chr11:10876995-10877196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
78-279
               

               
Cow position:
               
chr11:81042319-81042515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
78-322
               

               
Cow position:
               
chr11:2050337-2050583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
109, 162
               

               
Conread position:
               
78-323
               

               
Cow position:
               
chr11:26117959-26117717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
78-371
               

               
Cow position:
               
chr11:43526365-43526075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
78-380
               

               
Cow position:
               
chr11:30924910-30925225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 66
               

               
Conread position:
               
78-381
               

               
Cow position:
               
chr11:2083905-2084212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
78-381
               

               
Cow position:
               
chr11:47899034-47899337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 186
               

               
Conread position:
               
78-381
               

               
Cow position:
               
chr11:77319181-77319483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
184, 59
               

               
Conread position:
               
78-386
               

               
Cow position:
               
chr11:3726043-3726360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 209
               

               
Conread position:
               
78-386
               

               
Cow position:
               
chr11:45872561-45872237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
78-388
               

               
Cow position:
               
chr11:66188564-66188241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 127
               

               
Conread position:
               
78-389
               

               
Cow position:
               
chr11:36647118-36647420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 165
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr11:3233838-3234154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 159
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr11:16342484-16342150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr11:30639191-30638871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 182
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr11:49152711-49153027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 43
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr11:77128426-77128739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
185, 49
               

               
Conread position:
               
79-385
               

               
Cow position:
               
chr11:26144326-26144023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 55
               

               
Conread position:
               
80-308
               

               
Cow position:
               
chr11:57769591-57769373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 82
               

               
Conread position:
               
80-389
               

               
Cow position:
               
chr11:33310731-33311054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
81-386
               

               
Cow position:
               
chr11:10687127-10686813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
81-389
               

               
Cow position:
               
chr11:71501362-71501055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
189, 52
               

               
Conread position:
               
81-390
               

               
Cow position:
               
chr11:62239510-62239822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 32
               

               
Conread position:
               
81-391
               

               
Cow position:
               
chr11:36659052-36658744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 59
               

               
Conread position:
               
83-391
               

               
Cow position:
               
chr11:63434293-63433981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
84-259
               

               
Cow position:
               
chr11:30866906-30867080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
85-389
               

               
Cow position:
               
chr11:61348674-61348951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
262, 48
               

               
Conread position:
               
86-317
               

               
Cow position:
               
chr11:35668953-35668712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
86-381
               

               
Cow position:
               
chr11:11469868-11469579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 92
               

               
Conread position:
               
86-381
               

               
Cow position:
               
chr11:15016811-15017125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
183, 70
               

               
Conread position:
               
87-233
               

               
Cow position:
               
chr11:49396285-49396134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr11:65762830-65762513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 57
               

               
Conread position:
               
88-257
               

               
Cow position:
               
chr11:6329013-6329187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
88-322
               

               
Cow position:
               
chr11:2514825-2514590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
88-368
               

               
Cow position:
               
chr11:31417203-31417477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
88-381
               

               
Cow position:
               
chr11:42044223-42043927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
88-385
               

               
Cow position:
               
chr11:32436096-32436406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
88-452
               

               
Cow position:
               
chr11:33348417-33348049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 187
               

               
Conread position:
               
89-248
               

               
Cow position:
               
chr11:19755425-19755590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
57, 146
               

               
Conread position:
               
89-331
               

               
Cow position:
               
chr11:83000763-83000520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
181, 42
               

               
Conread position:
               
89-361
               

               
Cow position:
               
chr11:21728499-21728227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
189, 146
               

               
Conread position:
               
90-333
               

               
Cow position:
               
chr11:51293640-51293397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
92-300
               

               
Cow position:
               
chr11:5526804-5526589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
93-349
               

               
Cow position:
               
chr11:18591661-18591399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
94-388
               

               
Cow position:
               
chr11:77546192-77546491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
94-391
               

               
Cow position:
               
chr11:29960078-29960374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 66
               

               
Conread position:
               
95-372
               

               
Cow position:
               
chr11:38874627-38874342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
96-370
               

               
Cow position:
               
chr11:81913947-81913665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
96-381
               

               
Cow position:
               
chr11:69810679-69810972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
50, 128
               

               
Conread position:
               
97-314
               

               
Cow position:
               
chr11:37100583-37100361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 167
               

               
Conread position:
               
97-329
               

               
Cow position:
               
chr11:61246681-61246448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
97-388
               

               
Cow position:
               
chr11:81406381-81406091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
181, 163
               

               
Conread position:
               
97-389
               

               
Cow position:
               
chr11:67550587-67550302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
98-381
               

               
Cow position:
               
chr11:14470144-14470434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 156
               

               
Conread position:
               
98-381
               

               
Cow position:
               
chr11:23586413-23586707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
98-385
               

               
Cow position:
               
chr11:39462395-39462696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
42, 134
               

               
Conread position:
               
98-391
               

               
Cow position:
               
chr11:17660872-17661162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 139
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr11:2811945-2811695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
99-391
               

               
Cow position:
               
chr11:2925512-2925222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
99-391
               

               
Cow position:
               
chr11:34145138-34144846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
100-209
               

               
Cow position:
               
chr11:374948-375057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-250
               

               
Cow position:
               
chr11:81848640-81848788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr11:38891910-38891700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
100-314
               

               
Cow position:
               
chr11:21830573-21830352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
101-388
               

               
Cow position:
               
chr11:15772942-15772638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
101-391
               

               
Cow position:
               
chr11:17574540-17574271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
101-391
               

               
Cow position:
               
chr11:82108107-82107823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 32
               

               
Conread position:
               
102-374
               

               
Cow position:
               
chr11:61859118-61858841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
102-391
               

               
Cow position:
               
chr11:36238563-36238856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
105-327
               

               
Cow position:
               
chr11:18372862-18373083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr11:17553561-17553355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
106-400
               

               
Cow position:
               
chr11:27764938-27765241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
40, 124
               

               
Conread position:
               
107-215
               

               
Cow position:
               
chr11:83033914-83033802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
107-296
               

               
Cow position:
               
chr11:47850814-47851004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
107-317
               

               
Cow position:
               
chr11:4389212-4389422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 130
               

               
Conread position:
               
107-338
               

               
Cow position:
               
chr11:36301294-36301058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 177
               

               
Conread position:
               
110-368
               

               
Cow position:
               
chr11:5485797-5486069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
32, 163
               

               
Conread position:
               
110-380
               

               
Cow position:
               
chr11:23272208-23271936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
110-380
               

               
Cow position:
               
chr11:36286488-36286763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
110-391
               

               
Cow position:
               
chr11:11557958-11558250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
110-391
               

               
Cow position:
               
chr11:65607904-65607610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
110-400
               

               
Cow position:
               
chr11:52983480-52983763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 42
               

               
Conread position:
               
111-370
               

               
Cow position:
               
chr11:70114263-70114530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
111-385
               

               
Cow position:
               
chr11:61958959-61958671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
112-326
               

               
Cow position:
               
chr11:36672259-36672036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
112-445
               

               
Cow position:
               
chr11:16843214-16842854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
31, 185
               

               
Conread position:
               
113-384
               

               
Cow position:
               
chr11:72375896-72375608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
113-390
               

               
Cow position:
               
chr11:71493068-71492784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
114-386
               

               
Cow position:
               
chr11:9463622-9463909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
114-387
               

               
Cow position:
               
chr11:49231667-49231948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
115-370
               

               
Cow position:
               
chr11:19592203-19591937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
25, 162
               

               
Conread position:
               
116-254
               

               
Cow position:
               
chr11:27910888-27911026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 112
               

               
Conread position:
               
116-388
               

               
Cow position:
               
chr11:27913070-27913360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
80, 112
               

               
Conread position:
               
116-388
               

               
Cow position:
               
chr11:38334310-38334599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
117-388
               

               
Cow position:
               
chr11:27932062-27932357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
118-385
               

               
Cow position:
               
chr11:37804756-37804481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
73, 103
               

               
Conread position:
               
119-382
               

               
Cow position:
               
chr11:7497845-7497576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
120-389
               

               
Cow position:
               
chr11:71341649-71341388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
143, 19
               

               
Conread position:
               
121-314
               

               
Cow position:
               
chr11:28191869-28192070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
121-380
               

               
Cow position:
               
chr11:68912943-68913208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
121-385
               

               
Cow position:
               
chr11:41215544-41215805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
121-386
               

               
Cow position:
               
chr11:7458485-7458208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
121-391
               

               
Cow position:
               
chr11:63909852-63909588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
124-386
               

               
Cow position:
               
chr11:3920501-3920231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 140
               

               
Conread position:
               
125-377
               

               
Cow position:
               
chr11:36058610-36058861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 71
               

               
Conread position:
               
125-385
               

               
Cow position:
               
chr11:70601019-70600756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
21, 188
               

               
Conread position:
               
126-277
               

               
Cow position:
               
chr11:29786794-29786646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
126-346
               

               
Cow position:
               
chr11:8936678-8936463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
159, 98
               

               
Conread position:
               
126-349
               

               
Cow position:
               
chr11:48042233-48041998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
126-377
               

               
Cow position:
               
chr11:20684769-20684507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr11:13592544-13592810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 5
               

               
Conread position:
               
127-328
               

               
Cow position:
               
chr11:47109778-47109982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
118, 11
               

               
Conread position:
               
128-369
               

               
Cow position:
               
chr11:45742193-45742430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
129-381
               

               
Cow position:
               
chr11:55494491-55494748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
131-322
               

               
Cow position:
               
chr11:18399521-18399324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
5, 34
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr11:57171015-57170795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
131-381
               

               
Cow position:
               
chr11:34646403-34646658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
131-388
               

               
Cow position:
               
chr11:48383341-48383596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
132-381
               

               
Cow position:
               
chr11:15373664-15373908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 104
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr11:66572691-66572429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
135-357
               

               
Cow position:
               
chr11:67207561-67207771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
135-391
               

               
Cow position:
               
chr11:21438031-21438287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
196, 136
               

               
Conread position:
               
135-391
               

               
Cow position:
               
chr11:85294063-85294320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
193, 19
               

               
Conread position:
               
139-380
               

               
Cow position:
               
chr11:47004170-47004416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
140-349
               

               
Cow position:
               
chr11:67136619-67136396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr11:38670503-38670730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 180
               

               
Conread position:
               
140-369
               

               
Cow position:
               
chr11:81611590-81611825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr11:83687607-83687375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
140-379
               

               
Cow position:
               
chr11:69402427-69402182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
140-381
               

               
Cow position:
               
chr11:40573513-40573267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
140-389
               

               
Cow position:
               
chr11:70086145-70086409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
140-391
               

               
Cow position:
               
chr11:5287-5542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
140-391
               

               
Cow position:
               
chr11:9270907-9270648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 252
               

               
Conread position:
               
140-391
               

               
Cow position:
               
chr11:26845760-26845515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
141-381
               

               
Cow position:
               
chr11:30954820-30955069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
143-335
               

               
Cow position:
               
chr11:21428168-21427976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
143-391
               

               
Cow position:
               
chr11:51729110-51729365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
144-346
               

               
Cow position:
               
chr11:33468537-33468738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr11:30830791-30830545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr11:60143474-60143231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
144-388
               

               
Cow position:
               
chr11:1157469-1157719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 130
               

               
Conread position:
               
144-391
               

               
Cow position:
               
chr11:28993904-28993660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 19
               

               
Conread position:
               
145-324
               

               
Cow position:
               
chr11:15525779-15525973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
145-373
               

               
Cow position:
               
chr11:71008961-71009189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
145-386
               

               
Cow position:
               
chr11:74380020-74380263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
146-371
               

               
Cow position:
               
chr11:53511908-53512140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 208
               

               
Conread position:
               
146-381
               

               
Cow position:
               
chr11:8545186-8544949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
146-385
               

               
Cow position:
               
chr11:76889875-76890118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
146-386
               

               
Cow position:
               
chr11:70950709-70950944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
147-382
               

               
Cow position:
               
chr11:41176122-41175879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
147-386
               

               
Cow position:
               
chr11:59862040-59862281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
148-385
               

               
Cow position:
               
chr11:30209992-30209750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
148-391
               

               
Cow position:
               
chr11:16907214-16906972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 43
               

               
Conread position:
               
149-280
               

               
Cow position:
               
chr11:29266370-29266506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
149-347
               

               
Cow position:
               
chr11:85986341-85986140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
168, 196
               

               
Conread position:
               
150-391
               

               
Cow position:
               
chr11:42296787-42296541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
179, 121
               

               
Conread position:
               
153-373
               

               
Cow position:
               
chr11:80556054-80556280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
111, 139
               

               
Conread position:
               
153-391
               

               
Cow position:
               
chr11:35775172-35775416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
127, 144
               

               
Conread position:
               
154-391
               

               
Cow position:
               
chr11:48295867-48296109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
156-329
               

               
Cow position:
               
chr11:63499487-63499315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
156-385
               

               
Cow position:
               
chr11:6245158-6245387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 115
               

               
Conread position:
               
156-386
               

               
Cow position:
               
chr11:33287116-33286883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
157-317
               

               
Cow position:
               
chr11:6101451-6101609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
157-333
               

               
Cow position:
               
chr11:65843256-65843082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
157-335
               

               
Cow position:
               
chr11:30543455-30543636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
157-349
               

               
Cow position:
               
chr11:56349178-56348988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
157-372
               

               
Cow position:
               
chr11:11646907-11647132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 108
               

               
Conread position:
               
157-379
               

               
Cow position:
               
chr11:15958138-15958374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
157-381
               

               
Cow position:
               
chr11:32693634-32693415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
157-385
               

               
Cow position:
               
chr11:77118544-77118772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 108
               

               
Conread position:
               
157-386
               

               
Cow position:
               
chr11:80756946-80756707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
157-389
               

               
Cow position:
               
chr11:38577936-38577702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
157-389
               

               
Cow position:
               
chr11:40479017-40478776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
157-391
               

               
Cow position:
               
chr11:16540700-16540941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
157-391
               

               
Cow position:
               
chr11:56187457-56187687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
158-314
               

               
Cow position:
               
chr11:86894514-86894678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
158-335
               

               
Cow position:
               
chr11:41134227-41134049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
159-391
               

               
Cow position:
               
chr11:45434926-45435159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
160-381
               

               
Cow position:
               
chr11:71390723-71390497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
113, 209
               

               
Conread position:
               
160-391
               

               
Cow position:
               
chr11:2576063-2575825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 89
               

               
Conread position:
               
161-389
               

               
Cow position:
               
chr11:6202288-6202520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
170, 108
               

               
Conread position:
               
162-320
               

               
Cow position:
               
chr11:70824937-70825094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
162-337
               

               
Cow position:
               
chr11:85703549-85703722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
163-300
               

               
Cow position:
               
chr11:70741132-70740996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
163-388
               

               
Cow position:
               
chr11:6633555-6633786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
164-381
               

               
Cow position:
               
chr11:35213316-35213099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
164-391
               

               
Cow position:
               
chr11:63435362-63435599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
165-388
               

               
Cow position:
               
chr11:17493324-17493559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 71
               

               
Conread position:
               
165-391
               

               
Cow position:
               
chr11:70278263-70278034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
167-307
               

               
Cow position:
               
chr11:37546666-37546528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 63
               

               
Conread position:
               
167-385
               

               
Cow position:
               
chr11:32254371-32254144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
167-391
               

               
Cow position:
               
chr11:18851766-18851986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
157, 82
               

               
Conread position:
               
167-391
               

               
Cow position:
               
chr11:48306496-48306268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
169-391
               

               
Cow position:
               
chr11:70756327-70756556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
169-391
               

               
Cow position:
               
chr11:71806294-71806072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
182, 100
               

               
Conread position:
               
171-391
               

               
Cow position:
               
chr11:86132602-86132380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
172-317
               

               
Cow position:
               
chr11:58112378-58112232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr11:65435706-65435864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
172-334
               

               
Cow position:
               
chr11:51626815-51626980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
172-385
               

               
Cow position:
               
chr11:86720559-86720346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
155, 45
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr11:83925899-83926121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 141
               

               
Conread position:
               
173-323
               

               
Cow position:
               
chr11:33825037-33824883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
173-381
               

               
Cow position:
               
chr11:49057256-49057460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
90, 159
               

               
Conread position:
               
173-381
               

               
Cow position:
               
chr11:70978874-70978665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
173-391
               

               
Cow position:
               
chr11:63917613-63917398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
174-379
               

               
Cow position:
               
chr11:7460763-7460548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
175-391
               

               
Cow position:
               
chr11:69075764-69075989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
176-364
               

               
Cow position:
               
chr11:53462799-53462994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
177-390
               

               
Cow position:
               
chr11:65767055-65767277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
177-391
               

               
Cow position:
               
chr11:4653118-4652894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
179-314
               

               
Cow position:
               
chr11:10837669-10837530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
179-371
               

               
Cow position:
               
chr11:50472176-50472375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
179-392
               

               
Cow position:
               
chr11:63999230-63999012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
180-373
               

               
Cow position:
               
chr11:67615382-67615186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
180-377
               

               
Cow position:
               
chr11:47772531-47772325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
180-381
               

               
Cow position:
               
chr11:69977838-69978039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
180-391
               

               
Cow position:
               
chr11:42066721-42066943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
181-384
               

               
Cow position:
               
chr11:48659793-48660006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
181-388
               

               
Cow position:
               
chr11:52690661-52690445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
181-391
               

               
Cow position:
               
chr11:70206184-70206397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
183-389
               

               
Cow position:
               
chr11:261399-261191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
183-391
               

               
Cow position:
               
chr11:35536446-35536665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 169
               

               
Conread position:
               
184-369
               

               
Cow position:
               
chr11:76652887-76653076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 24
               

               
Conread position:
               
184-376
               

               
Cow position:
               
chr11:80537351-80537551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
184-384
               

               
Cow position:
               
chr11:59024489-59024289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 75
               

               
Conread position:
               
184-388
               

               
Cow position:
               
chr11:43008441-43008244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 86
               

               
Conread position:
               
184-391
               

               
Cow position:
               
chr11:46952814-46953026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
184-391
               

               
Cow position:
               
chr11:62788993-62789209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
184-391
               

               
Cow position:
               
chr11:69307365-69307592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
186-349
               

               
Cow position:
               
chr11:57873696-57873859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
145, 87
               

               
Conread position:
               
186-376
               

               
Cow position:
               
chr11:71807704-71807503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
186-389
               

               
Cow position:
               
chr11:62742766-62742569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
145, 25
               

               
Conread position:
               
189-357
               

               
Cow position:
               
chr11:485761-485584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
189-391
               

               
Cow position:
               
chr11:64868145-64867942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
189-391
               

               
Cow position:
               
chr11:67615059-67614843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
190-373
               

               
Cow position:
               
chr11:46592337-46592526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr11:47837186-47837392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
192-391
               

               
Cow position:
               
chr11:40608724-40608516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
193-373
               

               
Cow position:
               
chr11:6194079-6194266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
194-391
               

               
Cow position:
               
chr11:26275083-26274883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
195-381
               

               
Cow position:
               
chr11:27719447-27719262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 141
               

               
Conread position:
               
195-391
               

               
Cow position:
               
chr11:41293943-41293739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
195-391
               

               
Cow position:
               
chr11:83032559-83032759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
196-372
               

               
Cow position:
               
chr11:372818-372645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
134, 35
               

               
Conread position:
               
196-372
               

               
Cow position:
               
chr11:33345320-33345505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
196-378
               

               
Cow position:
               
chr11:7385306-7385505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
196-381
               

               
Cow position:
               
chr11:69392433-69392631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
196-391
               

               
Cow position:
               
chr11:83033359-83033161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
197-381
               

               
Cow position:
               
chr11:14466610-14466418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
197-381
               

               
Cow position:
               
chr11:53510620-53510434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
197-388
               

               
Cow position:
               
chr11:31506722-31506925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
198-391
               

               
Cow position:
               
chr11:63920170-63919975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
198-391
               

               
Cow position:
               
chr11:84132268-84132078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
199-381
               

               
Cow position:
               
chr11:249605-249413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
199-393
               

               
Cow position:
               
chr11:84490610-84490419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
200-390
               

               
Cow position:
               
chr11:375335-375537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
204-390
               

               
Cow position:
               
chr11:39060716-39060525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
212-381
               

               
Cow position:
               
chr11:75965757-75965583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
113, 69
               

               
Conread position:
               
212-389
               

               
Cow position:
               
chr11:46998877-46999055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
212-390
               

               
Cow position:
               
chr11:6194300-6194475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
219-381
               

               
Cow position:
               
chr11:35927007-35926840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
223-391
               

               
Cow position:
               
chr11:9368730-9368904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
226-391
               

               
Cow position:
               
chr11:4199179-4199349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
231-381
               

               
Cow position:
               
chr11:19946347-19946504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
231-391
               

               
Cow position:
               
chr11:32398548-32398714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
235-388
               

               
Cow position:
               
chr11:70825866-70826024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
236-391
               

               
Cow position:
               
chr11:27565252-27565409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
238-377
               

               
Cow position:
               
chr11:54218635-54218779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
238-391
               

               
Cow position:
               
chr11:35803052-35803215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
239-390
               

               
Cow position:
               
chr11:15072776-15072926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
239-391
               

               
Cow position:
               
chr11:69652865-69652703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
240-391
               

               
Cow position:
               
chr11:18785951-18785799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr11:79019135-79018980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
262-391
               

               
Cow position:
               
chr11:67312723-67312859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
271-391
               

               
Cow position:
               
chr11:62376520-62376395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
272-389
               

               
Cow position:
               
chr11:34106716-34106593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
272-391
               

               
Cow position:
               
chr11:22747374-22747252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
274-391
               

               
Cow position:
               
chr11:56290467-56290590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
275-391
               

               
Cow position:
               
chr11:30272974-30272861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
278-391
               

               
Cow position:
               
chr11:29786539-29786420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
298-451
               

               
Cow position:
               
chr11:68975124-68975270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 97
               
Show alignments to all cow chromosomes.