Cow genome map

Conread name: Pig2-92G10

Conread position: 1-261
Cow position: chr29:5977429-5977155 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 116

Conread position: 1-378
Cow position: chr29:13553837-13554217 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 40

Conread position: 2-201
Cow position: chr29:40894634-40894832 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 84, 67

Conread position: 2-206
Cow position: chr29:36243034-36243247 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 43

Conread position: 2-256
Cow position: chr29:16612259-16612005 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 84, 214

Conread position: 2-275
Cow position: chr29:26335685-26335403 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 182

Conread position: 2-278
Cow position: chr29:29551016-29551293 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 29

Conread position: 2-296
Cow position: chr29:3368770-3368469 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 79

Conread position: 2-301
Cow position: chr29:12798625-12798919 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 69

Conread position: 2-317
Cow position: chr29:44310335-44310013 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 291

Conread position: 2-328
Cow position: chr29:11684698-11685032 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 161

Conread position: 2-329
Cow position: chr29:43312102-43311767 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 254

Conread position: 2-331
Cow position: chr29:18338852-18338512 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 38

Conread position: 2-343
Cow position: chr29:42848923-42849269 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 27

Conread position: 2-349
Cow position: chr29:18212282-18211948 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 39

Conread position: 2-369
Cow position: chr29:43328330-43328716 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-375
Cow position: chr29:17668199-17668565 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 49

Conread position: 2-376
Cow position: chr29:17607109-17607497 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 219

Conread position: 2-385
Cow position: chr29:4120545-4120942 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 33

Conread position: 2-386
Cow position: chr29:20674115-20673721 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 258

Conread position: 2-390
Cow position: chr29:15940945-15940537 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 198

Conread position: 2-391
Cow position: chr29:10156596-10156212 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 126

Conread position: 2-391
Cow position: chr29:11398234-11397832 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 126

Conread position: 2-391
Cow position: chr29:24952379-24952779 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 361

Conread position: 2-391
Cow position: chr29:31926597-31926206 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 111

Conread position: 2-391
Cow position: chr29:40583490-40583880 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 142

Conread position: 3-313
Cow position: chr29:42406357-42406683 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 44, 198

Conread position: 3-314
Cow position: chr29:7041141-7040837 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 45, 70

Conread position: 3-317
Cow position: chr29:26734727-26735043 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 142

Conread position: 3-329
Cow position: chr29:9686315-9685981 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 142

Conread position: 4-227
Cow position: chr29:686496-686262 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-244
Cow position: chr29:1933865-1933613 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 4-246
Cow position: chr29:2694629-2694881 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 69

Conread position: 4-253
Cow position: chr29:5238413-5238673 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 69

Conread position: 4-253
Cow position: chr29:5241323-5241583 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 69

Conread position: 4-253
Cow position: chr29:8935180-8935440 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 27, 103

Conread position: 4-253
Cow position: chr29:28696473-28696214 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 120

Conread position: 4-254
Cow position: chr29:15944264-15944522 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 242

Conread position: 4-254
Cow position: chr29:35434565-35434818 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 216

Conread position: 4-257
Cow position: chr29:13108033-13108288 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 43, 68

Conread position: 4-259
Cow position: chr29:36037407-36037658 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 75

Conread position: 4-301
Cow position: chr29:35281198-35281496 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 138

Conread position: 4-317
Cow position: chr29:4327190-4327506 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 4-323
Cow position: chr29:18748886-18748582 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 4-325
Cow position: chr29:44902007-44901682 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 69

Conread position: 4-329
Cow position: chr29:27833682-27834015 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 164

Conread position: 4-334
Cow position: chr29:4328129-4328449 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 93

Conread position: 4-334
Cow position: chr29:21534995-21534641 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 195

Conread position: 4-335
Cow position: chr29:19792572-19792244 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 73, 40

Conread position: 4-335
Cow position: chr29:37785491-37785140 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 277

Conread position: 4-337
Cow position: chr29:12005069-12004728 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 149

Conread position: 4-349
Cow position: chr29:11136193-11135846 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 114

Conread position: 4-360
Cow position: chr29:20626272-20626630 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 134

Conread position: 4-362
Cow position: chr29:19756143-19756499 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 152

Conread position: 4-364
Cow position: chr29:35484939-35485313 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 276

Conread position: 4-368
Cow position: chr29:10456857-10456494 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 150

Conread position: 4-370
Cow position: chr29:28883775-28884154 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 45, 283

Conread position: 4-370
Cow position: chr29:29974739-29975111 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 9

Conread position: 4-372
Cow position: chr29:41811879-41811515 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 4-377
Cow position: chr29:465704-465319 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 4-378
Cow position: chr29:13639658-13639285 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 40

Conread position: 4-379
Cow position: chr29:732321-732702 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 39

Conread position: 4-381
Cow position: chr29:2744577-2744183 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-381
Cow position: chr29:6635799-6636164 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 4-381
Cow position: chr29:28197313-28196924 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 194

Conread position: 4-385
Cow position: chr29:2644613-2644223 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 123

Conread position: 4-385
Cow position: chr29:13372361-13372752 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 4-386
Cow position: chr29:4625298-4624910 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 123

Conread position: 4-388
Cow position: chr29:9638617-9638229 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 4-388
Cow position: chr29:17409029-17409426 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 4-388
Cow position: chr29:21196955-21196558 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 4-388
Cow position: chr29:23874152-23874551 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 4-388
Cow position: chr29:34745959-34745568 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 141

Conread position: 4-388
Cow position: chr29:35291794-35292184 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 135

Conread position: 4-388
Cow position: chr29:40096660-40097053 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 4-389
Cow position: chr29:6293769-6293387 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 29

Conread position: 4-389
Cow position: chr29:22935976-22936363 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 144

Conread position: 4-389
Cow position: chr29:42771361-42771727 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 47

Conread position: 4-390
Cow position: chr29:26616041-26615624 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 4-391
Cow position: chr29:4480479-4480079 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-391
Cow position: chr29:4875208-4874786 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 400

Conread position: 4-391
Cow position: chr29:6014792-6015220 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 113

Conread position: 4-391
Cow position: chr29:19761970-19762362 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 40

Conread position: 4-391
Cow position: chr29:24623936-24624342 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 191

Conread position: 4-391
Cow position: chr29:35501950-35501560 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 4-391
Cow position: chr29:39567381-39567776 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 164

Conread position: 4-391
Cow position: chr29:45005921-45005535 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 124

Conread position: 4-446
Cow position: chr29:40337833-40337401 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 79

Conread position: 5-242
Cow position: chr29:26519765-26519522 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 41, 122

Conread position: 5-301
Cow position: chr29:37292467-37292777 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 74

Conread position: 5-379
Cow position: chr29:19428369-19428745 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 26

Conread position: 5-388
Cow position: chr29:26017815-26017411 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 94

Conread position: 6-335
Cow position: chr29:7666332-7665998 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 221

Conread position: 6-379
Cow position: chr29:13615952-13615567 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 99

Conread position: 6-380
Cow position: chr29:38581666-38582051 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 86

Conread position: 6-386
Cow position: chr29:20933402-20933802 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 242

Conread position: 6-391
Cow position: chr29:1325138-1325533 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 184

Conread position: 6-391
Cow position: chr29:35459062-35458678 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 25

Conread position: 8-383
Cow position: chr29:477808-478194 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 258
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 25, 33

Conread position: 11-203
Cow position: chr29:38760449-38760257 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 32

Conread position: 13-267
Cow position: chr29:29547950-29548205 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 63, 181

Conread position: 13-300
Cow position: chr29:8125889-8125591 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 13-306
Cow position: chr29:21000346-21000636 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 102

Conread position: 13-312
Cow position: chr29:603606-603307 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 30, 126

Conread position: 13-318
Cow position: chr29:24345760-24345433 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 242

Conread position: 13-363
Cow position: chr29:2071864-2071505 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 130

Conread position: 13-367
Cow position: chr29:45589881-45589517 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 120

Conread position: 13-375
Cow position: chr29:17400-17034 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 13-381
Cow position: chr29:36530567-36530951 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 58

Conread position: 13-381
Cow position: chr29:37961268-37960892 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 13-385
Cow position: chr29:29056887-29057263 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 99

Conread position: 13-386
Cow position: chr29:36586284-36586656 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 52

Conread position: 13-388
Cow position: chr29:26990947-26991333 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 33, 101

Conread position: 13-388
Cow position: chr29:26997776-26998151 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 259
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 13

Conread position: 13-389
Cow position: chr29:16657395-16657788 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 60

Conread position: 13-389
Cow position: chr29:26290877-26290495 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 31, 19

Conread position: 13-391
Cow position: chr29:10838654-10839035 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 253

Conread position: 13-391
Cow position: chr29:13127406-13127026 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 131

Conread position: 13-391
Cow position: chr29:17109672-17110051 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 141

Conread position: 13-391
Cow position: chr29:21443640-21443245 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 393

Conread position: 13-391
Cow position: chr29:36216823-36217206 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 14-270
Cow position: chr29:8164158-8163892 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 32, 170

Conread position: 14-323
Cow position: chr29:20178425-20178114 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 147

Conread position: 14-372
Cow position: chr29:6925727-6926080 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 120

Conread position: 14-377
Cow position: chr29:10058822-10058456 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 121

Conread position: 14-389
Cow position: chr29:28868336-28868735 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 241

Conread position: 14-391
Cow position: chr29:5892555-5892939 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 14-391
Cow position: chr29:9709404-9709789 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 116

Conread position: 14-391
Cow position: chr29:19125065-19125416 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 35, 59

Conread position: 14-391
Cow position: chr29:26778596-26778976 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 19

Conread position: 14-391
Cow position: chr29:28775749-28775369 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 144

Conread position: 14-391
Cow position: chr29:32290307-32290703 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 15-253
Cow position: chr29:856697-856463 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 106

Conread position: 15-259
Cow position: chr29:45650635-45650387 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 15-391
Cow position: chr29:28195810-28195427 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 16-225
Cow position: chr29:32733037-32733240 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 121

Conread position: 16-267
Cow position: chr29:29477325-29477069 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 35, 165

Conread position: 16-381
Cow position: chr29:87310-86927 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 79

Conread position: 16-389
Cow position: chr29:32800000-32799620 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 125

Conread position: 17-252
Cow position: chr29:16097613-16097367 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 56

Conread position: 17-381
Cow position: chr29:16609446-16609832 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 93

Conread position: 17-391
Cow position: chr29:6844921-6844538 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 146

Conread position: 17-391
Cow position: chr29:22162549-22162155 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 139

Conread position: 17-391
Cow position: chr29:43495775-43496133 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 314, 17

Conread position: 17-449
Cow position: chr29:26771149-26771598 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 110

Conread position: 18-300
Cow position: chr29:3395822-3396105 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 18-310
Cow position: chr29:27007828-27008129 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 162

Conread position: 18-335
Cow position: chr29:26981205-26981520 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 127

Conread position: 19-259
Cow position: chr29:961629-961880 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 32, 209

Conread position: 20-353
Cow position: chr29:699898-699562 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 45

Conread position: 20-370
Cow position: chr29:15738633-15738267 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 77

Conread position: 20-381
Cow position: chr29:39111594-39111228 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 24

Conread position: 21-391
Cow position: chr29:10653069-10653426 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 17

Conread position: 22-381
Cow position: chr29:42364301-42363931 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 23-347
Cow position: chr29:3704489-3704150 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 221

Conread position: 25-254
Cow position: chr29:2415095-2414863 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 26, 58

Conread position: 26-318
Cow position: chr29:3502776-3503071 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 134

Conread position: 27-260
Cow position: chr29:14097414-14097170 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 28-224
Cow position: chr29:13458784-13458980 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 7

Conread position: 28-385
Cow position: chr29:18878782-18878393 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 213

Conread position: 29-381
Cow position: chr29:5062852-5063229 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 22, 127

Conread position: 30-236
Cow position: chr29:17135572-17135779 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 35

Conread position: 31-377
Cow position: chr29:14501316-14501673 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 191

Conread position: 31-381
Cow position: chr29:19907078-19907439 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 20, 48

Conread position: 31-385
Cow position: chr29:27816095-27816438 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 110

Conread position: 32-297
Cow position: chr29:35636147-35636426 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 114

Conread position: 34-293
Cow position: chr29:26285306-26285045 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 130

Conread position: 35-267
Cow position: chr29:26980121-26980364 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 72

Conread position: 35-349
Cow position: chr29:17131880-17131569 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 128

Conread position: 35-354
Cow position: chr29:40891975-40891646 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 295

Conread position: 36-379
Cow position: chr29:22613164-22613512 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 69

Conread position: 37-361
Cow position: chr29:26334661-26334323 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 12, 190

Conread position: 37-385
Cow position: chr29:7965981-7966334 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 10, 31

Conread position: 40-234
Cow position: chr29:41076295-41076092 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 40-381
Cow position: chr29:31928712-31929071 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 40-384
Cow position: chr29:41530581-41530937 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 149

Conread position: 41-255
Cow position: chr29:4691952-4691726 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 168

Conread position: 41-406
Cow position: chr29:9911911-9912283 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 41-447
Cow position: chr29:40165976-40166382 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 88

Conread position: 43-385
Cow position: chr29:26329954-26330286 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 44-334
Cow position: chr29:29558701-29558402 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 33, 50

Conread position: 44-335
Cow position: chr29:41747181-41747480 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 24

Conread position: 44-367
Cow position: chr29:8669092-8669431 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 189

Conread position: 44-368
Cow position: chr29:22069010-22068669 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 85

Conread position: 44-388
Cow position: chr29:25333716-25333370 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 110

Conread position: 44-391
Cow position: chr29:12679893-12680250 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 10

Conread position: 44-391
Cow position: chr29:22175430-22175775 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 114

Conread position: 45-259
Cow position: chr29:21924948-21925166 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 45-320
Cow position: chr29:2623742-2623462 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 21

Conread position: 45-375
Cow position: chr29:27668904-27668582 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 33, 90

Conread position: 45-375
Cow position: chr29:37599466-37599137 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 120

Conread position: 45-381
Cow position: chr29:13634562-13634214 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 37, 26

Conread position: 45-381
Cow position: chr29:26129237-26129578 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 70

Conread position: 45-385
Cow position: chr29:109448-109775 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 119

Conread position: 45-386
Cow position: chr29:2188599-2188267 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 103

Conread position: 45-386
Cow position: chr29:21933375-21933032 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 109

Conread position: 45-388
Cow position: chr29:25088491-25088834 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 167

Conread position: 45-391
Cow position: chr29:12784218-12783870 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 110

Conread position: 45-398
Cow position: chr29:32655686-32655334 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 21

Conread position: 45-433
Cow position: chr29:94807-94439 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 117

Conread position: 46-361
Cow position: chr29:27009157-27009480 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 29, 177

Conread position: 46-365
Cow position: chr29:9139147-9139489 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 46-369
Cow position: chr29:29475508-29475184 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 34, 72

Conread position: 46-391
Cow position: chr29:44236207-44236547 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 85

Conread position: 47-221
Cow position: chr29:6813183-6813362 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 166

Conread position: 47-229
Cow position: chr29:16662825-16663009 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 82

Conread position: 47-328
Cow position: chr29:2522318-2522590 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 72

Conread position: 47-340
Cow position: chr29:4804973-4805264 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 112

Conread position: 47-370
Cow position: chr29:19389226-19389551 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 73

Conread position: 47-391
Cow position: chr29:5099022-5098672 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 193

Conread position: 47-391
Cow position: chr29:6217808-6217451 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 73

Conread position: 47-391
Cow position: chr29:19338719-19339095 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 47-393
Cow position: chr29:26318934-26319262 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 49

Conread position: 48-321
Cow position: chr29:35738529-35738254 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 158

Conread position: 48-377
Cow position: chr29:29769605-29769271 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 49-378
Cow position: chr29:34297823-34297487 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 144

Conread position: 49-389
Cow position: chr29:707203-706864 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 49-391
Cow position: chr29:4194379-4194034 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 71

Conread position: 49-391
Cow position: chr29:40117314-40117665 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 123

Conread position: 50-357
Cow position: chr29:32767774-32767485 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 50-391
Cow position: chr29:2984630-2984984 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 50-391
Cow position: chr29:18021932-18021589 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 27, 76

Conread position: 51-259
Cow position: chr29:44135717-44135504 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 20

Conread position: 51-381
Cow position: chr29:32963298-32963621 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 151

Conread position: 51-391
Cow position: chr29:8926715-8926367 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 140

Conread position: 51-391
Cow position: chr29:17222152-17222507 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 230

Conread position: 52-388
Cow position: chr29:29512388-29512049 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 17

Conread position: 52-391
Cow position: chr29:356071-356415 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 113

Conread position: 53-339
Cow position: chr29:31594369-31594087 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 84

Conread position: 53-401
Cow position: chr29:26317607-26317954 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 54

Conread position: 55-272
Cow position: chr29:4065836-4066055 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 10

Conread position: 56-381
Cow position: chr29:11562363-11562697 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 185

Conread position: 56-381
Cow position: chr29:11787541-11787879 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 58

Conread position: 57-355
Cow position: chr29:18735893-18735581 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 58-383
Cow position: chr29:16359364-16359707 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 13

Conread position: 59-338
Cow position: chr29:10659595-10659316 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 7

Conread position: 59-391
Cow position: chr29:23984212-23983861 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 60-345
Cow position: chr29:3502309-3502617 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 17, 151

Conread position: 60-363
Cow position: chr29:36183029-36183347 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 60-390
Cow position: chr29:44378665-44378326 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 60-391
Cow position: chr29:25737664-25737320 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 61-381
Cow position: chr29:20903534-20903206 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 138

Conread position: 61-390
Cow position: chr29:10235361-10235041 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 56

Conread position: 63-332
Cow position: chr29:42886139-42886416 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 108

Conread position: 64-372
Cow position: chr29:14615499-14615188 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 122, 195

Conread position: 68-364
Cow position: chr29:34744853-34744558 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 78

Conread position: 70-381
Cow position: chr29:43251396-43251083 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 193, 18

Conread position: 71-335
Cow position: chr29:24119969-24119708 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 81, 127

Conread position: 71-386
Cow position: chr29:26986710-26987018 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 190, 32

Conread position: 71-391
Cow position: chr29:11704889-11705206 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 124

Conread position: 72-332
Cow position: chr29:39642944-39643205 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 66

Conread position: 72-389
Cow position: chr29:6286390-6286069 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 82

Conread position: 73-380
Cow position: chr29:21706605-21706316 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 64

Conread position: 74-334
Cow position: chr29:1395376-1395628 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 44

Conread position: 76-328
Cow position: chr29:2532834-2533084 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 148

Conread position: 76-391
Cow position: chr29:38580750-38581073 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 11

Conread position: 77-389
Cow position: chr29:23697752-23698070 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 114

Conread position: 78-275
Cow position: chr29:3711161-3711363 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 114, 72

Conread position: 78-370
Cow position: chr29:16309525-16309816 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 200, 56

Conread position: 78-372
Cow position: chr29:24103774-24103466 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 175

Conread position: 78-378
Cow position: chr29:22714953-22714642 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 78-381
Cow position: chr29:11915591-11915904 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 122

Conread position: 78-381
Cow position: chr29:19821071-19821367 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 258, 60

Conread position: 78-381
Cow position: chr29:34773953-34773652 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 43

Conread position: 78-385
Cow position: chr29:868547-868863 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 78-386
Cow position: chr29:19254048-19253740 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 112, 181

Conread position: 78-388
Cow position: chr29:25474682-25475014 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 68, 0

Conread position: 78-391
Cow position: chr29:4520110-4520430 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 78-391
Cow position: chr29:19949084-19949401 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 73, 111

Conread position: 78-391
Cow position: chr29:27858566-27858881 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 161

Conread position: 78-410
Cow position: chr29:1229383-1229719 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 47

Conread position: 79-389
Cow position: chr29:26985004-26985318 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 65, 24

Conread position: 80-218
Cow position: chr29:23155027-23155172 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 83-386
Cow position: chr29:354010-353709 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 200
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 22, 43

Conread position: 85-368
Cow position: chr29:28739410-28739696 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 106, 68

Conread position: 86-299
Cow position: chr29:5109428-5109206 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 86-337
Cow position: chr29:463871-463620 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 133

Conread position: 86-377
Cow position: chr29:28446477-28446176 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 230

Conread position: 86-393
Cow position: chr29:35677762-35677448 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 104, 67

Conread position: 87-299
Cow position: chr29:5677568-5677785 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 149

Conread position: 87-388
Cow position: chr29:31489103-31489410 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 48, 186

Conread position: 88-335
Cow position: chr29:14484761-14484505 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 88-391
Cow position: chr29:28166433-28166128 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 147

Conread position: 89-274
Cow position: chr29:29262832-29263002 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 174, 55

Conread position: 89-338
Cow position: chr29:14768325-14768084 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 73

Conread position: 89-385
Cow position: chr29:30440711-30441024 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 48, 302

Conread position: 93-370
Cow position: chr29:27618667-27618952 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 121

Conread position: 93-381
Cow position: chr29:24578669-24578947 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 154, 51

Conread position: 93-382
Cow position: chr29:6337452-6337750 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 62

Conread position: 94-382
Cow position: chr29:44682300-44682018 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 235, 26

Conread position: 95-381
Cow position: chr29:26654249-26653960 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 51, 145

Conread position: 96-385
Cow position: chr29:41364902-41365197 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 176

Conread position: 96-389
Cow position: chr29:22778389-22778081 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 252

Conread position: 97-386
Cow position: chr29:26269862-26270156 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 173, 7

Conread position: 100-391
Cow position: chr29:1022086-1022390 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 100-391
Cow position: chr29:17154572-17154872 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 39

Conread position: 101-391
Cow position: chr29:43009287-43008990 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 51, 162

Conread position: 102-335
Cow position: chr29:44384402-44384161 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 124

Conread position: 102-391
Cow position: chr29:7663467-7663176 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 47

Conread position: 102-391
Cow position: chr29:39329798-39329509 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 13

Conread position: 103-390
Cow position: chr29:11433922-11434212 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 127

Conread position: 104-377
Cow position: chr29:3100461-3100187 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 168

Conread position: 104-381
Cow position: chr29:10818636-10818366 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 208

Conread position: 105-377
Cow position: chr29:377645-377359 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 114

Conread position: 106-313
Cow position: chr29:5652523-5652715 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 106-335
Cow position: chr29:26042431-26042660 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 79, 117

Conread position: 106-391
Cow position: chr29:11054051-11053766 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 12

Conread position: 107-254
Cow position: chr29:26508290-26508444 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 22

Conread position: 107-389
Cow position: chr29:28979676-28979410 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 54

Conread position: 107-391
Cow position: chr29:5409341-5409048 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 11

Conread position: 108-391
Cow position: chr29:6870980-6870671 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 155, 42

Conread position: 109-386
Cow position: chr29:20910894-20910603 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 37, 7

Conread position: 110-399
Cow position: chr29:9718966-9718671 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 110

Conread position: 111-403
Cow position: chr29:30188533-30188244 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 211

Conread position: 112-391
Cow position: chr29:32211251-32210977 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 113-364
Cow position: chr29:44988972-44988723 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 86

Conread position: 113-391
Cow position: chr29:5186689-5186399 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 33, 90

Conread position: 114-329
Cow position: chr29:43956704-43956916 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 20

Conread position: 114-391
Cow position: chr29:11646914-11647188 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 149, 39

Conread position: 115-325
Cow position: chr29:25030691-25030479 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 205

Conread position: 115-361
Cow position: chr29:27652818-27652564 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 61

Conread position: 115-381
Cow position: chr29:4334539-4334802 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 124

Conread position: 121-328
Cow position: chr29:3539103-3538881 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 121-334
Cow position: chr29:17301342-17301565 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 121-385
Cow position: chr29:37618123-37618394 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 115

Conread position: 121-386
Cow position: chr29:12900734-12900463 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 117

Conread position: 124-377
Cow position: chr29:43099925-43099665 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 51

Conread position: 126-314
Cow position: chr29:456972-456777 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 139

Conread position: 126-314
Cow position: chr29:40615699-40615509 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 27

Conread position: 126-391
Cow position: chr29:27588743-27589017 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 9, 113

Conread position: 127-297
Cow position: chr29:31899148-31898976 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 15

Conread position: 129-398
Cow position: chr29:35442636-35442361 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 158

Conread position: 130-372
Cow position: chr29:25091939-25092181 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 142, 118

Conread position: 131-377
Cow position: chr29:29942905-29942647 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 131-381
Cow position: chr29:24252066-24252319 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 100

Conread position: 132-243
Cow position: chr29:23951740-23951626 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 132-380
Cow position: chr29:23244051-23243795 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 142, 164

Conread position: 134-388
Cow position: chr29:12025639-12025385 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 136-318
Cow position: chr29:26206701-26206879 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 16, 11

Conread position: 140-317
Cow position: chr29:29940336-29940509 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 28

Conread position: 140-323
Cow position: chr29:25432240-25432417 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 85

Conread position: 140-385
Cow position: chr29:17296968-17297224 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 140-388
Cow position: chr29:4085156-4085400 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 51, 81

Conread position: 141-317
Cow position: chr29:19186587-19186754 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 19

Conread position: 142-400
Cow position: chr29:29559881-29559619 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 101

Conread position: 144-320
Cow position: chr29:45383966-45384144 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 144-370
Cow position: chr29:31674471-31674706 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 122, 92

Conread position: 144-391
Cow position: chr29:26416201-26416445 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 122, 39

Conread position: 144-462
Cow position: chr29:1124496-1124824 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 182, 242

Conread position: 145-386
Cow position: chr29:363099-363338 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 118

Conread position: 145-388
Cow position: chr29:2055902-2056152 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 17

Conread position: 145-390
Cow position: chr29:29176773-29176524 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 29

Conread position: 146-381
Cow position: chr29:40960005-40959765 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 95

Conread position: 147-368
Cow position: chr29:10018418-10018650 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 43, 72

Conread position: 148-372
Cow position: chr29:29314810-29314577 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 126, 0

Conread position: 150-377
Cow position: chr29:7425482-7425709 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 118

Conread position: 150-381
Cow position: chr29:27329740-27329977 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 122, 13

Conread position: 150-388
Cow position: chr29:29551700-29551936 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 113, 11

Conread position: 153-317
Cow position: chr29:40936364-40936193 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 153-377
Cow position: chr29:29795538-29795302 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 37, 136

Conread position: 153-386
Cow position: chr29:9455204-9454969 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 64

Conread position: 156-275
Cow position: chr29:26411905-26411785 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 156-380
Cow position: chr29:35084370-35084139 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 99

Conread position: 157-385
Cow position: chr29:36220382-36220622 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 5

Conread position: 158-391
Cow position: chr29:44008927-44008691 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 136

Conread position: 159-386
Cow position: chr29:24045846-24046085 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 159-387
Cow position: chr29:4052128-4051900 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 104, 57

Conread position: 163-321
Cow position: chr29:18580155-18579992 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 100, 89

Conread position: 163-461
Cow position: chr29:4002756-4003061 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 160, 54

Conread position: 164-381
Cow position: chr29:18462694-18462467 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 105, 66

Conread position: 166-339
Cow position: chr29:38731730-38731908 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 123

Conread position: 168-302
Cow position: chr29:13061968-13062102 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 68

Conread position: 169-380
Cow position: chr29:30227407-30227199 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 180, 104

Conread position: 172-386
Cow position: chr29:8176517-8176744 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 174-391
Cow position: chr29:34359109-34358884 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 96, 58

Conread position: 175-377
Cow position: chr29:3685639-3685438 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 67, 24

Conread position: 183-391
Cow position: chr29:847762-847548 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 13, 67

Conread position: 184-328
Cow position: chr29:11489841-11489696 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 129

Conread position: 184-389
Cow position: chr29:4444596-4444810 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 23

Conread position: 184-391
Cow position: chr29:12626098-12625882 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 88, 0

Conread position: 184-391
Cow position: chr29:13028319-13028534 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 82, 22

Conread position: 184-391
Cow position: chr29:21941480-21941694 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 87, 206

Conread position: 185-371
Cow position: chr29:26559358-26559172 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 146, 31

Conread position: 185-381
Cow position: chr29:7310570-7310757 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 51

Conread position: 187-389
Cow position: chr29:40995005-40994799 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 5

Conread position: 192-388
Cow position: chr29:18404224-18404026 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 145, 34

Conread position: 193-370
Cow position: chr29:17168295-17168481 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 67

Conread position: 195-388
Cow position: chr29:5046544-5046744 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 196-377
Cow position: chr29:26477432-26477623 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 196-381
Cow position: chr29:25839587-25839781 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 177

Conread position: 196-386
Cow position: chr29:28674814-28674616 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 196-388
Cow position: chr29:23389663-23389466 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 196-406
Cow position: chr29:8862585-8862373 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 124, 62

Conread position: 201-391
Cow position: chr29:13373197-13373395 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 117, 71

Conread position: 202-389
Cow position: chr29:27873503-27873693 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 42

Conread position: 207-377
Cow position: chr29:20924807-20924986 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 209-391
Cow position: chr29:2263091-2262901 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 210-398
Cow position: chr29:14758955-14758762 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 212-378
Cow position: chr29:30713800-30713628 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 37

Conread position: 215-361
Cow position: chr29:13486861-13487015 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 215-389
Cow position: chr29:694089-693917 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 62

Conread position: 215-389
Cow position: chr29:31813860-31814030 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 45

Conread position: 218-391
Cow position: chr29:20770258-20770438 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 219-391
Cow position: chr29:42886466-42886637 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 112, 33

Conread position: 223-389
Cow position: chr29:22519210-22519035 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 161

Conread position: 223-391
Cow position: chr29:8005003-8004833 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 84

Conread position: 224-391
Cow position: chr29:19250269-19250427 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 24

Conread position: 228-346
Cow position: chr29:28559268-28559391 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 228-381
Cow position: chr29:7103480-7103642 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 231-391
Cow position: chr29:5210414-5210585 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 32, 120

Conread position: 238-378
Cow position: chr29:36830294-36830439 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 47

Conread position: 238-381
Cow position: chr29:40633581-40633727 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 87, 38

Conread position: 240-381
Cow position: chr29:1011637-1011505 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 244-385
Cow position: chr29:43544661-43544515 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 28

Conread position: 247-389
Cow position: chr29:4423496-4423347 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 263-389
Cow position: chr29:8686289-8686422 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 268-391
Cow position: chr29:30918514-30918643 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 270-391
Cow position: chr29:5788997-5789122 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 10

Conread position: 272-391
Cow position: chr29:4070597-4070718 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.