Cow genome map

Conread name: Pig2-92G10

Conread position: 1-391
Cow position: chr3:71246705-71247091 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 136

Conread position: 2-203
Cow position: chr3:84152986-84153203 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 2-224
Cow position: chr3:65020003-65020235 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-257
Cow position: chr3:61361088-61361338 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 188, 39

Conread position: 2-260
Cow position: chr3:26894342-26894596 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 42

Conread position: 2-261
Cow position: chr3:2483127-2483382 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 49, 31

Conread position: 2-330
Cow position: chr3:68342584-68342243 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 8, 0

Conread position: 2-335
Cow position: chr3:48370802-48371144 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 269

Conread position: 2-349
Cow position: chr3:42177831-42178181 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 2-352
Cow position: chr3:80082146-80081789 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 168

Conread position: 2-368
Cow position: chr3:77188120-77188487 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 184, 39

Conread position: 2-371
Cow position: chr3:42489645-42489250 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 81

Conread position: 2-371
Cow position: chr3:75479688-75480051 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 26

Conread position: 2-372
Cow position: chr3:31047271-31046899 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 71

Conread position: 2-378
Cow position: chr3:49230686-49231059 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 78

Conread position: 2-380
Cow position: chr3:64011145-64010751 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 49, 33

Conread position: 2-381
Cow position: chr3:2674700-2675091 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 173

Conread position: 2-381
Cow position: chr3:12255151-12255540 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 71

Conread position: 2-381
Cow position: chr3:53588721-53588322 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 73

Conread position: 2-385
Cow position: chr3:47284511-47284879 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 156

Conread position: 2-385
Cow position: chr3:53384612-53384214 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 138

Conread position: 2-387
Cow position: chr3:31771371-31771749 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 155

Conread position: 2-388
Cow position: chr3:9663516-9663103 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 245

Conread position: 2-388
Cow position: chr3:48241292-48241683 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 164

Conread position: 2-389
Cow position: chr3:31907472-31907075 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 41

Conread position: 2-389
Cow position: chr3:80468980-80468608 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 117

Conread position: 2-391
Cow position: chr3:12712252-12711843 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 2-391
Cow position: chr3:17935256-17934866 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 145

Conread position: 2-391
Cow position: chr3:35852798-35852399 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 188

Conread position: 2-391
Cow position: chr3:37486117-37485725 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 31, 74

Conread position: 2-391
Cow position: chr3:48296382-48296770 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 69

Conread position: 2-391
Cow position: chr3:50614316-50614713 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 61

Conread position: 2-391
Cow position: chr3:54340745-54340350 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 40, 71

Conread position: 2-391
Cow position: chr3:65058373-65058770 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 110

Conread position: 2-391
Cow position: chr3:65236690-65237096 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 2-391
Cow position: chr3:66708401-66707995 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 39

Conread position: 2-391
Cow position: chr3:73708730-73709119 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 2-391
Cow position: chr3:79292506-79292900 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 159

Conread position: 2-391
Cow position: chr3:80053863-80053471 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 130

Conread position: 2-391
Cow position: chr3:80581346-80581727 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 32

Conread position: 2-420
Cow position: chr3:24352560-24352960 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 288
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 259, 31

Conread position: 2-445
Cow position: chr3:7408154-7408613 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 303
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 50, 280

Conread position: 3-389
Cow position: chr3:83490748-83491155 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 283

Conread position: 3-391
Cow position: chr3:7678348-7678725 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 32

Conread position: 4-212
Cow position: chr3:68514876-68514672 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 141

Conread position: 4-216
Cow position: chr3:22908158-22907940 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 29

Conread position: 4-221
Cow position: chr3:79905239-79905022 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 180
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 92

Conread position: 4-229
Cow position: chr3:36657097-36656865 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 4-229
Cow position: chr3:62623960-62623745 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 141

Conread position: 4-234
Cow position: chr3:8557108-8556876 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 127

Conread position: 4-252
Cow position: chr3:11640110-11640360 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 6, 16

Conread position: 4-258
Cow position: chr3:61678364-61678627 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 4-259
Cow position: chr3:8716920-8717186 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 4-259
Cow position: chr3:12323741-12324008 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 47, 59

Conread position: 4-260
Cow position: chr3:66978516-66978771 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 4-268
Cow position: chr3:22872379-22872104 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 4-274
Cow position: chr3:6853830-6853556 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 143

Conread position: 4-288
Cow position: chr3:522398-522667 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 125

Conread position: 4-297
Cow position: chr3:61191244-61190952 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 131

Conread position: 4-298
Cow position: chr3:75727916-75727611 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-299
Cow position: chr3:13118020-13118316 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 193

Conread position: 4-300
Cow position: chr3:49454905-49455213 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 4-308
Cow position: chr3:20663865-20663550 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 159

Conread position: 4-310
Cow position: chr3:2903625-2903308 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 199

Conread position: 4-310
Cow position: chr3:17952329-17952643 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 159

Conread position: 4-312
Cow position: chr3:77496491-77496816 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 4-314
Cow position: chr3:81939927-81940247 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 4-315
Cow position: chr3:14724970-14725292 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 47, 287

Conread position: 4-315
Cow position: chr3:30358961-30358643 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 69

Conread position: 4-317
Cow position: chr3:3164820-3164503 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 29

Conread position: 4-317
Cow position: chr3:13899780-13899455 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 279

Conread position: 4-317
Cow position: chr3:41367310-41366988 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 192

Conread position: 4-321
Cow position: chr3:45312725-45313046 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 156

Conread position: 4-322
Cow position: chr3:1133419-1133080 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 48

Conread position: 4-329
Cow position: chr3:9843251-9843591 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 247

Conread position: 4-334
Cow position: chr3:2035971-2036307 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 320

Conread position: 4-334
Cow position: chr3:68647833-68648175 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 278

Conread position: 4-335
Cow position: chr3:61171829-61171498 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 65

Conread position: 4-335
Cow position: chr3:62999325-62998997 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 23

Conread position: 4-338
Cow position: chr3:24939550-24939212 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 25

Conread position: 4-339
Cow position: chr3:5851254-5850911 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 240

Conread position: 4-339
Cow position: chr3:69962036-69961700 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 161

Conread position: 4-344
Cow position: chr3:21341290-21340938 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 60

Conread position: 4-344
Cow position: chr3:27544661-27544319 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 26

Conread position: 4-344
Cow position: chr3:49218634-49218294 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 106

Conread position: 4-349
Cow position: chr3:29807136-29807491 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 4-361
Cow position: chr3:78076865-78077227 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 4-361
Cow position: chr3:79902176-79902538 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 260

Conread position: 4-366
Cow position: chr3:83920874-83921231 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 36

Conread position: 4-368
Cow position: chr3:11987004-11987378 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 36

Conread position: 4-369
Cow position: chr3:69751028-69750661 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 136

Conread position: 4-370
Cow position: chr3:18184741-18185126 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-370
Cow position: chr3:61539470-61539852 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 26

Conread position: 4-370
Cow position: chr3:61857169-61857557 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-370
Cow position: chr3:67929593-67929209 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 99

Conread position: 4-371
Cow position: chr3:80818409-80818769 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 36

Conread position: 4-374
Cow position: chr3:67544201-67543813 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 62

Conread position: 4-375
Cow position: chr3:59473789-59474178 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 64

Conread position: 4-376
Cow position: chr3:2397110-2396732 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 250

Conread position: 4-377
Cow position: chr3:31298484-31298105 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 46

Conread position: 4-377
Cow position: chr3:31419369-31419750 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 80

Conread position: 4-377
Cow position: chr3:55117296-55116919 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 4-377
Cow position: chr3:74088488-74088122 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 4-378
Cow position: chr3:54782338-54781944 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 96

Conread position: 4-379
Cow position: chr3:1830892-1830516 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 4-379
Cow position: chr3:14263068-14263453 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 4-379
Cow position: chr3:54434646-54435034 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 193

Conread position: 4-379
Cow position: chr3:57577372-57577757 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 60

Conread position: 4-380
Cow position: chr3:18459847-18459467 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 162

Conread position: 4-380
Cow position: chr3:35299347-35299727 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 141

Conread position: 4-381
Cow position: chr3:3032074-3032469 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 4-381
Cow position: chr3:7566743-7566355 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 4-381
Cow position: chr3:48362756-48363134 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 103

Conread position: 4-381
Cow position: chr3:50069452-50069825 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 53

Conread position: 4-381
Cow position: chr3:55272367-55271983 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 62

Conread position: 4-381
Cow position: chr3:59798927-59799310 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 69

Conread position: 4-381
Cow position: chr3:61225061-61224682 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 264
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 19

Conread position: 4-381
Cow position: chr3:70895719-70896110 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 242

Conread position: 4-381
Cow position: chr3:71497473-71497076 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 169

Conread position: 4-381
Cow position: chr3:80071790-80072191 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-381
Cow position: chr3:81471424-81471034 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 29

Conread position: 4-384
Cow position: chr3:2393299-2392903 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 331

Conread position: 4-384
Cow position: chr3:30179757-30180151 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 155

Conread position: 4-384
Cow position: chr3:59001072-59000692 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 147

Conread position: 4-384
Cow position: chr3:72390756-72391147 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 78

Conread position: 4-385
Cow position: chr3:25690466-25690859 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 4-385
Cow position: chr3:42423658-42423262 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 158

Conread position: 4-385
Cow position: chr3:49650053-49650454 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-386
Cow position: chr3:31056329-31055946 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 217

Conread position: 4-386
Cow position: chr3:31206545-31206943 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 256

Conread position: 4-386
Cow position: chr3:79220522-79220925 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 267

Conread position: 4-387
Cow position: chr3:72018796-72019184 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 69

Conread position: 4-388
Cow position: chr3:209995-210388 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 140

Conread position: 4-388
Cow position: chr3:18066807-18067201 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 334

Conread position: 4-388
Cow position: chr3:20802955-20802562 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 242

Conread position: 4-388
Cow position: chr3:34270607-34270983 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 29

Conread position: 4-388
Cow position: chr3:37599743-37599359 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 173

Conread position: 4-388
Cow position: chr3:49382625-49383018 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 159

Conread position: 4-388
Cow position: chr3:55085517-55085100 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 4-388
Cow position: chr3:68586714-68587091 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 29

Conread position: 4-389
Cow position: chr3:5365358-5365747 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 134

Conread position: 4-389
Cow position: chr3:15954404-15954015 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 152

Conread position: 4-389
Cow position: chr3:53149999-53150401 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 178

Conread position: 4-390
Cow position: chr3:55190074-55189682 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 36

Conread position: 4-390
Cow position: chr3:74233883-74234257 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 36

Conread position: 4-391
Cow position: chr3:115894-116262 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 47

Conread position: 4-391
Cow position: chr3:10958552-10958168 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 31

Conread position: 4-391
Cow position: chr3:16547349-16547738 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 216

Conread position: 4-391
Cow position: chr3:22676406-22676038 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 48, 29

Conread position: 4-391
Cow position: chr3:23169397-23168994 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 236

Conread position: 4-391
Cow position: chr3:24935028-24935437 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 271

Conread position: 4-391
Cow position: chr3:26219388-26218979 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 217

Conread position: 4-391
Cow position: chr3:26903790-26904182 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 236

Conread position: 4-391
Cow position: chr3:38346876-38347262 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 170

Conread position: 4-391
Cow position: chr3:45881582-45881970 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 215

Conread position: 4-391
Cow position: chr3:49327619-49328016 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 67

Conread position: 4-391
Cow position: chr3:53593026-53592618 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 27

Conread position: 4-391
Cow position: chr3:55010479-55010093 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 83, 31

Conread position: 4-391
Cow position: chr3:58766965-58767335 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 4-391
Cow position: chr3:58969220-58968831 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 130

Conread position: 4-391
Cow position: chr3:59596878-59597250 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 4-391
Cow position: chr3:59630827-59630441 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 165

Conread position: 4-391
Cow position: chr3:61839964-61840347 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 127

Conread position: 4-391
Cow position: chr3:72675760-72676163 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 267

Conread position: 4-391
Cow position: chr3:77271605-77271206 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 159

Conread position: 4-391
Cow position: chr3:81371329-81371721 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 135

Conread position: 4-393
Cow position: chr3:69849829-69849441 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 144

Conread position: 4-395
Cow position: chr3:75710986-75711382 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 124

Conread position: 4-400
Cow position: chr3:18393711-18393313 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 4-410
Cow position: chr3:71231079-71231485 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 75

Conread position: 4-452
Cow position: chr3:59101508-59101973 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 4-460
Cow position: chr3:57554172-57553708 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 16

Conread position: 5-350
Cow position: chr3:16656794-16656466 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 87

Conread position: 5-380
Cow position: chr3:73467295-73467692 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 46

Conread position: 5-381
Cow position: chr3:70566064-70565676 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 261

Conread position: 5-391
Cow position: chr3:67704210-67704618 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 5-391
Cow position: chr3:82056435-82056047 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 21

Conread position: 6-257
Cow position: chr3:23277867-23277611 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 29

Conread position: 6-274
Cow position: chr3:31903433-31903165 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 119

Conread position: 6-298
Cow position: chr3:15662023-15661728 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 35

Conread position: 6-319
Cow position: chr3:44535085-44534765 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 63

Conread position: 6-370
Cow position: chr3:54903248-54903615 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 74

Conread position: 6-377
Cow position: chr3:79592213-79591833 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 6-391
Cow position: chr3:5101085-5100700 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 6-391
Cow position: chr3:61323029-61323403 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 71, 131

Conread position: 8-388
Cow position: chr3:28898551-28898154 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 276

Conread position: 9-317
Cow position: chr3:59271237-59271535 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 68

Conread position: 10-392
Cow position: chr3:80564637-80565039 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 123

Conread position: 12-381
Cow position: chr3:4461808-4461422 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 171

Conread position: 12-385
Cow position: chr3:27546149-27545753 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 19

Conread position: 12-391
Cow position: chr3:64172126-64172512 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 110

Conread position: 13-232
Cow position: chr3:8753146-8753374 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 203

Conread position: 13-234
Cow position: chr3:51012851-51012623 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 13-301
Cow position: chr3:35283403-35283113 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 133, 21

Conread position: 13-314
Cow position: chr3:78200949-78201257 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 227

Conread position: 13-317
Cow position: chr3:82657403-82657095 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 156

Conread position: 13-328
Cow position: chr3:79208309-79207983 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 30

Conread position: 13-329
Cow position: chr3:59514796-59515108 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 13-331
Cow position: chr3:43528555-43528231 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 184

Conread position: 13-334
Cow position: chr3:39328094-39328409 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 92

Conread position: 13-335
Cow position: chr3:36570360-36570035 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 32

Conread position: 13-339
Cow position: chr3:48530320-48530648 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 238

Conread position: 13-349
Cow position: chr3:33698407-33698759 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 13-349
Cow position: chr3:48269545-48269885 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 197

Conread position: 13-368
Cow position: chr3:29891735-29891360 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 104

Conread position: 13-370
Cow position: chr3:4457394-4457020 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 193

Conread position: 13-372
Cow position: chr3:49461255-49460873 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 13-377
Cow position: chr3:53573068-53572694 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 140

Conread position: 13-377
Cow position: chr3:57754798-57754418 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 240

Conread position: 13-380
Cow position: chr3:31309680-31309293 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 13-380
Cow position: chr3:36672323-36671934 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 268

Conread position: 13-380
Cow position: chr3:48252579-48252946 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 60

Conread position: 13-385
Cow position: chr3:2024866-2025264 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 144

Conread position: 13-385
Cow position: chr3:11254470-11254102 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 160

Conread position: 13-385
Cow position: chr3:14466022-14465640 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 98

Conread position: 13-386
Cow position: chr3:17695321-17694938 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 20

Conread position: 13-388
Cow position: chr3:55970189-55970576 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 13-388
Cow position: chr3:79884804-79884417 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 270

Conread position: 13-390
Cow position: chr3:60597235-60597612 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 109

Conread position: 13-391
Cow position: chr3:2506797-2506407 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 265

Conread position: 13-391
Cow position: chr3:14552560-14552947 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 58

Conread position: 13-391
Cow position: chr3:15052260-15051878 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 65

Conread position: 13-391
Cow position: chr3:26920577-26920982 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 237

Conread position: 13-391
Cow position: chr3:59604553-59604915 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 120

Conread position: 13-391
Cow position: chr3:59691586-59691960 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 133

Conread position: 13-451
Cow position: chr3:14717496-14717912 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 60

Conread position: 14-277
Cow position: chr3:83442196-83441932 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 90

Conread position: 14-314
Cow position: chr3:28675672-28675976 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 270

Conread position: 14-334
Cow position: chr3:20256876-20257223 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 287

Conread position: 14-335
Cow position: chr3:8147979-8147657 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 12

Conread position: 14-361
Cow position: chr3:68146144-68145801 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 28, 75

Conread position: 14-370
Cow position: chr3:24549149-24548786 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 142

Conread position: 14-385
Cow position: chr3:53112851-53113241 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 289

Conread position: 15-328
Cow position: chr3:45523949-45524270 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 19

Conread position: 15-389
Cow position: chr3:61278599-61278978 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 18

Conread position: 15-391
Cow position: chr3:28908519-28908131 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 138

Conread position: 15-391
Cow position: chr3:37186525-37186898 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 16

Conread position: 16-380
Cow position: chr3:2630486-2630835 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 17

Conread position: 16-388
Cow position: chr3:45184157-45183764 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 17

Conread position: 16-391
Cow position: chr3:7338093-7337712 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 17

Conread position: 16-391
Cow position: chr3:82460868-82461251 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 113

Conread position: 17-380
Cow position: chr3:53790858-53790476 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 17-385
Cow position: chr3:14626464-14626084 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 17-388
Cow position: chr3:53270511-53270899 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 18-362
Cow position: chr3:19708410-19708065 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 12

Conread position: 18-385
Cow position: chr3:52017447-52017837 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 0

Conread position: 19-300
Cow position: chr3:16004298-16004015 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 116

Conread position: 19-386
Cow position: chr3:20129629-20130002 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 251

Conread position: 19-389
Cow position: chr3:46900883-46901268 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 189

Conread position: 20-308
Cow position: chr3:67161621-67161927 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 20-362
Cow position: chr3:46350341-46350714 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 364

Conread position: 20-376
Cow position: chr3:66610149-66609787 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 124

Conread position: 20-377
Cow position: chr3:2518848-2518481 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 53

Conread position: 20-391
Cow position: chr3:53739500-53739113 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 14

Conread position: 21-389
Cow position: chr3:37041122-37041489 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 19

Conread position: 21-391
Cow position: chr3:65968845-65969239 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 22-299
Cow position: chr3:27285916-27286204 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 250

Conread position: 22-371
Cow position: chr3:65800286-65800637 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 178

Conread position: 23-314
Cow position: chr3:35975413-35975119 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 18, 133

Conread position: 23-339
Cow position: chr3:77227010-77227338 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 23-391
Cow position: chr3:59611024-59610646 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 50

Conread position: 23-391
Cow position: chr3:62826928-62826547 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 11

Conread position: 24-276
Cow position: chr3:58158771-58158520 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 25, 203

Conread position: 24-381
Cow position: chr3:6689687-6690062 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 25-390
Cow position: chr3:12286930-12287293 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 25-391
Cow position: chr3:66292480-66292104 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 26-331
Cow position: chr3:18763589-18763896 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 115

Conread position: 26-385
Cow position: chr3:2216055-2216434 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 26-391
Cow position: chr3:70401598-70401968 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 175

Conread position: 27-258
Cow position: chr3:56704841-56704611 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 46

Conread position: 28-391
Cow position: chr3:53221716-53222085 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 57

Conread position: 29-315
Cow position: chr3:49787108-49787404 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 231

Conread position: 30-343
Cow position: chr3:66375022-66375342 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 30-381
Cow position: chr3:80740279-80740624 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 33

Conread position: 31-317
Cow position: chr3:24305205-24304923 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 74

Conread position: 31-330
Cow position: chr3:54959891-54960194 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 130

Conread position: 31-391
Cow position: chr3:48852266-48851899 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 237

Conread position: 33-325
Cow position: chr3:11019820-11020118 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 93

Conread position: 35-314
Cow position: chr3:70333769-70333492 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 35-337
Cow position: chr3:5416526-5416204 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 215

Conread position: 35-388
Cow position: chr3:52863477-52863115 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 88

Conread position: 35-398
Cow position: chr3:37451774-37452147 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 88

Conread position: 37-381
Cow position: chr3:62883910-62884265 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 40, 160

Conread position: 37-391
Cow position: chr3:38691696-38691334 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 12

Conread position: 39-247
Cow position: chr3:35074395-35074605 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 86

Conread position: 39-328
Cow position: chr3:23876708-23877000 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 105

Conread position: 40-298
Cow position: chr3:22924676-22924437 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 40-326
Cow position: chr3:364508-364212 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 243

Conread position: 40-375
Cow position: chr3:4031679-4032019 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 290

Conread position: 40-388
Cow position: chr3:33253167-33252820 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 214

Conread position: 40-390
Cow position: chr3:26553997-26553644 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 40-391
Cow position: chr3:3738202-3738553 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 31

Conread position: 40-391
Cow position: chr3:76387901-76387536 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 36, 208

Conread position: 40-397
Cow position: chr3:20437934-20437581 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 102

Conread position: 41-334
Cow position: chr3:18458942-18458649 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 11

Conread position: 41-381
Cow position: chr3:44861596-44861250 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 41, 30

Conread position: 41-389
Cow position: chr3:52418677-52419007 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 83

Conread position: 43-381
Cow position: chr3:59205955-59206299 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 176

Conread position: 44-235
Cow position: chr3:19198396-19198585 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 151

Conread position: 44-243
Cow position: chr3:61467324-61467525 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 102, 178

Conread position: 44-247
Cow position: chr3:28939202-28938984 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 121

Conread position: 44-249
Cow position: chr3:79148561-79148345 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 44-250
Cow position: chr3:51609531-51609746 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 44-253
Cow position: chr3:18854808-18855023 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 91

Conread position: 44-314
Cow position: chr3:19789404-19789125 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 186

Conread position: 44-321
Cow position: chr3:44623182-44622890 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 89

Conread position: 44-349
Cow position: chr3:15057883-15057594 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 115

Conread position: 44-379
Cow position: chr3:31933387-31933040 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 111

Conread position: 44-380
Cow position: chr3:12675324-12674982 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 28, 126

Conread position: 44-389
Cow position: chr3:8393061-8393415 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 210

Conread position: 44-390
Cow position: chr3:64281221-64280859 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 44-391
Cow position: chr3:72130-72501 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 94

Conread position: 44-391
Cow position: chr3:14601998-14601632 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 80

Conread position: 44-391
Cow position: chr3:45534584-45534224 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 182

Conread position: 44-391
Cow position: chr3:45647852-45648202 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 112

Conread position: 44-391
Cow position: chr3:73443372-73443024 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 210

Conread position: 45-251
Cow position: chr3:56102154-56102362 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 61

Conread position: 45-254
Cow position: chr3:58383684-58383895 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 45-306
Cow position: chr3:25691465-25691732 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 127

Conread position: 45-318
Cow position: chr3:78894598-78894332 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 90

Conread position: 45-330
Cow position: chr3:48629870-48629584 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 42, 110

Conread position: 45-331
Cow position: chr3:42594940-42594646 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 26

Conread position: 45-349
Cow position: chr3:63179584-63179885 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 103

Conread position: 45-368
Cow position: chr3:17957183-17957516 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 50

Conread position: 45-381
Cow position: chr3:23408626-23408296 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 31, 84

Conread position: 45-381
Cow position: chr3:29360419-29360088 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 59

Conread position: 45-381
Cow position: chr3:54862708-54862356 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 334

Conread position: 45-382
Cow position: chr3:56637382-56637729 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 158

Conread position: 45-385
Cow position: chr3:13330056-13329720 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 111

Conread position: 45-389
Cow position: chr3:15229103-15228753 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 113

Conread position: 45-389
Cow position: chr3:23471752-23471389 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 45-390
Cow position: chr3:17895570-17895919 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 45-391
Cow position: chr3:56653-56305 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 111

Conread position: 45-391
Cow position: chr3:5096919-5097279 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 107

Conread position: 45-391
Cow position: chr3:9641280-9641640 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 45-391
Cow position: chr3:15158757-15159103 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 45-391
Cow position: chr3:17937123-17936767 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 71

Conread position: 45-391
Cow position: chr3:29812960-29813303 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 272

Conread position: 45-391
Cow position: chr3:45647393-45647752 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 45-391
Cow position: chr3:54740155-54739815 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 108

Conread position: 45-391
Cow position: chr3:58540814-58540450 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 235

Conread position: 45-391
Cow position: chr3:59333491-59333830 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 45

Conread position: 45-391
Cow position: chr3:65413559-65413206 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 72

Conread position: 45-391
Cow position: chr3:67744912-67744556 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 181

Conread position: 45-391
Cow position: chr3:83816077-83815716 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 141

Conread position: 45-392
Cow position: chr3:39970156-39969789 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 45-444
Cow position: chr3:78946123-78945712 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 46-313
Cow position: chr3:30701039-30701298 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 216
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 31, 107

Conread position: 46-323
Cow position: chr3:12668796-12669083 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 143

Conread position: 46-380
Cow position: chr3:16333516-16333858 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 123

Conread position: 47-266
Cow position: chr3:81473722-81473951 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 128

Conread position: 47-317
Cow position: chr3:81401582-81401320 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 24

Conread position: 47-327
Cow position: chr3:60892351-60892626 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 47-375
Cow position: chr3:29507314-29507638 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 35, 22

Conread position: 47-381
Cow position: chr3:19006385-19006719 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 101

Conread position: 47-381
Cow position: chr3:68881391-68881059 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 52

Conread position: 47-381
Cow position: chr3:73759801-73759455 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 233

Conread position: 47-385
Cow position: chr3:66901024-66900667 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 196

Conread position: 47-386
Cow position: chr3:18497743-18498083 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 93

Conread position: 47-386
Cow position: chr3:39171766-39171420 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 275

Conread position: 47-390
Cow position: chr3:68708283-68707942 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 37

Conread position: 47-391
Cow position: chr3:8457375-8457726 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 13

Conread position: 47-391
Cow position: chr3:59208532-59208866 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 217

Conread position: 47-398
Cow position: chr3:49140329-49139968 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 24

Conread position: 48-335
Cow position: chr3:68583283-68582994 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 205

Conread position: 48-361
Cow position: chr3:76138208-76138511 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 95

Conread position: 48-374
Cow position: chr3:17456550-17456212 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 35, 184

Conread position: 48-391
Cow position: chr3:4049932-4050265 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 48-391
Cow position: chr3:77365575-77365218 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 78

Conread position: 48-437
Cow position: chr3:81277985-81277585 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 341

Conread position: 49-241
Cow position: chr3:34392376-34392181 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 27, 105

Conread position: 49-317
Cow position: chr3:63861181-63860897 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 200

Conread position: 49-349
Cow position: chr3:75057394-75057106 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 31

Conread position: 49-362
Cow position: chr3:74409215-74409521 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 31, 22

Conread position: 49-373
Cow position: chr3:10347074-10347405 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 228

Conread position: 49-375
Cow position: chr3:38863833-38864182 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 103

Conread position: 49-377
Cow position: chr3:26065721-26066058 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 119

Conread position: 49-379
Cow position: chr3:49337454-49337780 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 13

Conread position: 49-381
Cow position: chr3:3985050-3985384 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 111

Conread position: 49-381
Cow position: chr3:27274260-27274590 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 22

Conread position: 49-381
Cow position: chr3:55124558-55124218 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 49-385
Cow position: chr3:49482984-49482650 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 32

Conread position: 49-391
Cow position: chr3:8393659-8394014 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 122

Conread position: 49-391
Cow position: chr3:53046937-53046591 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 115

Conread position: 49-391
Cow position: chr3:75158085-75158427 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 94

Conread position: 49-391
Cow position: chr3:75570721-75570382 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 65

Conread position: 49-400
Cow position: chr3:57763943-57764299 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 219

Conread position: 50-224
Cow position: chr3:61262524-61262703 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 50-278
Cow position: chr3:13577459-13577233 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 28, 12

Conread position: 50-294
Cow position: chr3:42588070-42588329 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 50-313
Cow position: chr3:49731916-49731651 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 109

Conread position: 50-317
Cow position: chr3:42483621-42483900 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 50-337
Cow position: chr3:67165636-67165932 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 31, 150

Conread position: 50-388
Cow position: chr3:44101702-44102037 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 51-329
Cow position: chr3:56704132-56703845 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 160

Conread position: 51-381
Cow position: chr3:68627953-68627627 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 92

Conread position: 51-387
Cow position: chr3:42367767-42367446 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 20

Conread position: 51-391
Cow position: chr3:5374057-5374400 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 115

Conread position: 51-391
Cow position: chr3:32584880-32585222 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 97

Conread position: 52-381
Cow position: chr3:73394843-73395178 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 222

Conread position: 53-308
Cow position: chr3:5899550-5899808 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 46

Conread position: 53-328
Cow position: chr3:74499948-74500246 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 53-381
Cow position: chr3:13507190-13507530 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 53-381
Cow position: chr3:27940400-27940081 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 163

Conread position: 53-383
Cow position: chr3:6873521-6873187 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 152

Conread position: 53-389
Cow position: chr3:73764469-73764130 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 171

Conread position: 54-381
Cow position: chr3:7331394-7331066 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 216

Conread position: 55-381
Cow position: chr3:54945851-54946193 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 55-391
Cow position: chr3:75046144-75045804 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 77

Conread position: 56-391
Cow position: chr3:525081-525418 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 87

Conread position: 57-382
Cow position: chr3:70899628-70899953 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 111

Conread position: 57-386
Cow position: chr3:45279185-45279533 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 40

Conread position: 57-386
Cow position: chr3:60933143-60933484 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 70

Conread position: 58-329
Cow position: chr3:84000341-84000617 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 13

Conread position: 59-361
Cow position: chr3:51578591-51578279 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 135

Conread position: 59-376
Cow position: chr3:44932246-44932570 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 12

Conread position: 59-385
Cow position: chr3:13302126-13301784 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 213

Conread position: 60-328
Cow position: chr3:17451203-17450937 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 148

Conread position: 60-372
Cow position: chr3:14633255-14632930 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 77

Conread position: 62-252
Cow position: chr3:59701746-59701936 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 82

Conread position: 63-388
Cow position: chr3:71430478-71430135 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 64-377
Cow position: chr3:34937581-34937902 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 14

Conread position: 64-391
Cow position: chr3:8733599-8733287 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 127, 23

Conread position: 65-327
Cow position: chr3:66866661-66866399 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 155

Conread position: 65-381
Cow position: chr3:20092768-20092464 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 61

Conread position: 66-385
Cow position: chr3:3556282-3556611 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 10, 22

Conread position: 67-314
Cow position: chr3:73590261-73590005 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 67-341
Cow position: chr3:41328197-41328461 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 81

Conread position: 69-379
Cow position: chr3:23092240-23091916 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 12, 307

Conread position: 71-318
Cow position: chr3:48578586-48578832 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 41

Conread position: 71-376
Cow position: chr3:73460724-73461023 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 202, 79

Conread position: 71-381
Cow position: chr3:82020099-82019777 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 135

Conread position: 71-388
Cow position: chr3:71237902-71238222 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 33

Conread position: 71-391
Cow position: chr3:52607928-52608254 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 167

Conread position: 72-391
Cow position: chr3:25754782-25755092 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 9, 78

Conread position: 73-279
Cow position: chr3:55970973-55971182 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 73-301
Cow position: chr3:45307682-45307912 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 73, 120

Conread position: 73-362
Cow position: chr3:22820317-22820614 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 60

Conread position: 73-388
Cow position: chr3:2680259-2680582 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 203

Conread position: 74-232
Cow position: chr3:12563227-12563385 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 74-364
Cow position: chr3:56523679-56523401 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 20

Conread position: 74-391
Cow position: chr3:57624215-57624536 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 75

Conread position: 76-291
Cow position: chr3:28904095-28904310 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 61

Conread position: 78-223
Cow position: chr3:56523748-56523605 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 78-263
Cow position: chr3:23269855-23270036 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 56

Conread position: 78-306
Cow position: chr3:8604261-8604037 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 188, 0

Conread position: 78-307
Cow position: chr3:4087413-4087177 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 74

Conread position: 78-314
Cow position: chr3:63332563-63332801 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 67, 190

Conread position: 78-328
Cow position: chr3:16362985-16362732 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 84, 72

Conread position: 78-346
Cow position: chr3:28692677-28692410 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 110, 60

Conread position: 78-360
Cow position: chr3:55947328-55947621 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 284

Conread position: 78-370
Cow position: chr3:43233256-43233557 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 68, 176

Conread position: 78-377
Cow position: chr3:5045057-5044755 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 64, 189

Conread position: 78-381
Cow position: chr3:26970578-26970875 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 193

Conread position: 78-386
Cow position: chr3:30009157-30008841 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 111, 135

Conread position: 78-386
Cow position: chr3:74621244-74620928 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 68, 104

Conread position: 78-389
Cow position: chr3:51234343-51234026 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 69

Conread position: 78-391
Cow position: chr3:15752875-15752564 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 56

Conread position: 78-391
Cow position: chr3:18686669-18686978 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 55

Conread position: 78-391
Cow position: chr3:52652321-52652008 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 75

Conread position: 78-391
Cow position: chr3:56476435-56476754 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 66

Conread position: 78-391
Cow position: chr3:61143846-61144166 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 178

Conread position: 78-391
Cow position: chr3:75080519-75080833 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 147

Conread position: 79-337
Cow position: chr3:83201774-83201513 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 169

Conread position: 79-390
Cow position: chr3:23445136-23444817 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 60

Conread position: 79-391
Cow position: chr3:55836075-55835749 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 80-372
Cow position: chr3:30055691-30055404 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 105, 67

Conread position: 81-389
Cow position: chr3:59621879-59621578 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 15

Conread position: 81-390
Cow position: chr3:77006261-77006542 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 267, 72

Conread position: 83-451
Cow position: chr3:22232885-22232522 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 191, 50

Conread position: 85-377
Cow position: chr3:39661690-39661399 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 105, 60

Conread position: 85-381
Cow position: chr3:12705799-12705481 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 221

Conread position: 85-406
Cow position: chr3:70334941-70334608 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 14

Conread position: 86-289
Cow position: chr3:80922329-80922542 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 105, 56

Conread position: 86-391
Cow position: chr3:8060893-8061198 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 47

Conread position: 87-246
Cow position: chr3:4861451-4861608 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 141
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 87-349
Cow position: chr3:32184261-32183990 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 74

Conread position: 88-288
Cow position: chr3:29334751-29334550 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 174

Conread position: 88-391
Cow position: chr3:18725872-18725572 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 90

Conread position: 90-236
Cow position: chr3:78067373-78067222 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 90-376
Cow position: chr3:188624-188929 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 90-391
Cow position: chr3:17447843-17447543 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 82

Conread position: 90-393
Cow position: chr3:11711718-11712039 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 93-338
Cow position: chr3:55106675-55106426 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 179

Conread position: 93-386
Cow position: chr3:21547334-21547034 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 53, 136

Conread position: 93-391
Cow position: chr3:67930410-67930115 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 37

Conread position: 93-391
Cow position: chr3:68156498-68156795 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 47, 115

Conread position: 94-391
Cow position: chr3:78092740-78092440 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 9

Conread position: 95-388
Cow position: chr3:19404093-19404368 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 221, 49

Conread position: 96-381
Cow position: chr3:76015070-76015354 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 52

Conread position: 97-253
Cow position: chr3:23215812-23215644 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 97-261
Cow position: chr3:15192336-15192501 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 152

Conread position: 97-393
Cow position: chr3:53836913-53836634 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 76

Conread position: 98-381
Cow position: chr3:15506220-15506510 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 141

Conread position: 99-349
Cow position: chr3:26960821-26960560 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 99-437
Cow position: chr3:53240047-53240365 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 181, 20

Conread position: 100-364
Cow position: chr3:56301573-56301313 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 152

Conread position: 100-391
Cow position: chr3:74134480-74134776 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 114

Conread position: 102-391
Cow position: chr3:60265459-60265182 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 118, 46

Conread position: 103-389
Cow position: chr3:83215031-83215332 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 103-391
Cow position: chr3:2198660-2198954 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 108, 180

Conread position: 104-347
Cow position: chr3:22907938-22907702 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 174, 46

Conread position: 105-326
Cow position: chr3:15859891-15859665 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 41, 108

Conread position: 105-381
Cow position: chr3:45211075-45211363 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 41, 121

Conread position: 106-309
Cow position: chr3:55063087-55062887 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 85, 120

Conread position: 106-380
Cow position: chr3:53875981-53875704 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 120

Conread position: 107-373
Cow position: chr3:67698061-67698330 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 154, 94

Conread position: 107-391
Cow position: chr3:54506502-54506779 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 164, 31

Conread position: 110-229
Cow position: chr3:5082857-5082734 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 110-261
Cow position: chr3:23265510-23265358 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 110-335
Cow position: chr3:35005562-35005786 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 58

Conread position: 110-373
Cow position: chr3:11063163-11063421 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 129

Conread position: 110-375
Cow position: chr3:76713537-76713269 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 40

Conread position: 110-377
Cow position: chr3:25944862-25945151 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 177

Conread position: 110-381
Cow position: chr3:23105581-23105300 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 135, 0

Conread position: 110-381
Cow position: chr3:70609407-70609688 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 118

Conread position: 110-385
Cow position: chr3:78896433-78896713 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 110-389
Cow position: chr3:25477597-25477870 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 84

Conread position: 110-391
Cow position: chr3:46006246-46005950 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 27, 187

Conread position: 111-310
Cow position: chr3:3062348-3062553 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 111-319
Cow position: chr3:25059859-25060074 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 0

Conread position: 111-372
Cow position: chr3:74878804-74878536 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 49

Conread position: 111-381
Cow position: chr3:83845690-83845975 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 98, 0

Conread position: 112-328
Cow position: chr3:21693728-21693954 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 144

Conread position: 112-389
Cow position: chr3:4319497-4319781 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 102

Conread position: 112-390
Cow position: chr3:10896615-10896893 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 90

Conread position: 113-385
Cow position: chr3:36375760-36375474 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 123

Conread position: 116-389
Cow position: chr3:61169593-61169869 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 13

Conread position: 117-381
Cow position: chr3:49132258-49132001 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 79

Conread position: 118-361
Cow position: chr3:83727458-83727209 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 98

Conread position: 120-391
Cow position: chr3:7940761-7940485 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 183

Conread position: 121-299
Cow position: chr3:65380949-65381124 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 108

Conread position: 121-310
Cow position: chr3:59885180-59885378 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 121-385
Cow position: chr3:55712221-55712506 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 121-388
Cow position: chr3:57760294-57760567 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 151

Conread position: 121-391
Cow position: chr3:63269023-63269295 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 10

Conread position: 122-385
Cow position: chr3:67520379-67520100 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 122-386
Cow position: chr3:83798043-83797767 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 155

Conread position: 122-434
Cow position: chr3:27697186-27696867 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 144

Conread position: 125-354
Cow position: chr3:74206010-74205775 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 126-385
Cow position: chr3:38828563-38828823 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 136

Conread position: 126-391
Cow position: chr3:3637988-3638250 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 5

Conread position: 126-391
Cow position: chr3:3649417-3649152 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 24, 11

Conread position: 127-371
Cow position: chr3:38035790-38035538 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 127-386
Cow position: chr3:53095138-53094864 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 191

Conread position: 127-388
Cow position: chr3:49791011-49790743 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 11

Conread position: 127-391
Cow position: chr3:6182398-6182155 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 224, 90

Conread position: 129-291
Cow position: chr3:78739665-78739824 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 24

Conread position: 129-359
Cow position: chr3:61894370-61894127 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 194

Conread position: 130-257
Cow position: chr3:13241395-13241268 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 20

Conread position: 130-349
Cow position: chr3:36446912-36446690 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 76

Conread position: 131-317
Cow position: chr3:61024498-61024309 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 45

Conread position: 131-349
Cow position: chr3:70631824-70632049 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 63

Conread position: 131-388
Cow position: chr3:66884135-66883875 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 131-390
Cow position: chr3:74079833-74079566 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 139, 0

Conread position: 131-391
Cow position: chr3:57273872-57274133 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 75

Conread position: 132-380
Cow position: chr3:30940623-30940867 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 143, 18

Conread position: 132-386
Cow position: chr3:13890274-13890544 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 134-317
Cow position: chr3:83708159-83707981 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 22

Conread position: 135-389
Cow position: chr3:34669918-34669663 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 180

Conread position: 135-452
Cow position: chr3:27212172-27212500 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 128, 24

Conread position: 136-366
Cow position: chr3:55819558-55819805 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 136-377
Cow position: chr3:19198797-19199043 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 56

Conread position: 137-391
Cow position: chr3:15751910-15751641 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 137-391
Cow position: chr3:24872531-24872776 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 126, 20

Conread position: 138-388
Cow position: chr3:26981877-26982127 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 53, 117

Conread position: 138-389
Cow position: chr3:74502509-74502255 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 117

Conread position: 139-381
Cow position: chr3:20678021-20677780 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 132

Conread position: 140-361
Cow position: chr3:26739603-26739380 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 10

Conread position: 140-364
Cow position: chr3:54374046-54373815 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 128

Conread position: 140-368
Cow position: chr3:55434146-55434378 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 32

Conread position: 140-368
Cow position: chr3:75687624-75687388 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 140-381
Cow position: chr3:7661667-7661914 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 160
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 112, 0

Conread position: 140-386
Cow position: chr3:1453307-1453059 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 139, 56

Conread position: 140-388
Cow position: chr3:53318218-53318469 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 130

Conread position: 141-369
Cow position: chr3:79092579-79092342 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 139

Conread position: 142-389
Cow position: chr3:76268165-76267905 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 16, 27

Conread position: 144-254
Cow position: chr3:16891117-16891227 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 63

Conread position: 144-391
Cow position: chr3:84597141-84596893 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 70

Conread position: 145-386
Cow position: chr3:75853511-75853262 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 162

Conread position: 146-378
Cow position: chr3:81359292-81359048 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 39, 111

Conread position: 146-381
Cow position: chr3:70762302-70762061 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 136, 0

Conread position: 146-381
Cow position: chr3:76922842-76922601 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 116, 146

Conread position: 146-391
Cow position: chr3:26874412-26874662 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 57, 9

Conread position: 147-370
Cow position: chr3:3913629-3913391 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 145

Conread position: 147-370
Cow position: chr3:81507290-81507060 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 86

Conread position: 147-381
Cow position: chr3:36418644-36418422 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 209, 66

Conread position: 148-389
Cow position: chr3:62046485-62046734 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 115, 87

Conread position: 149-323
Cow position: chr3:15231853-15232029 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 149-389
Cow position: chr3:19792716-19792974 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 40, 236

Conread position: 153-370
Cow position: chr3:24616009-24615795 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 178, 36

Conread position: 153-385
Cow position: chr3:31850542-31850311 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 84

Conread position: 153-386
Cow position: chr3:58960761-58960521 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 125

Conread position: 156-324
Cow position: chr3:27109070-27108908 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 156-386
Cow position: chr3:32787291-32787527 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 123, 39

Conread position: 157-299
Cow position: chr3:34294453-34294308 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 157-334
Cow position: chr3:53192590-53192417 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 124, 42

Conread position: 157-335
Cow position: chr3:23037798-23037610 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 157-352
Cow position: chr3:15992546-15992749 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 157-389
Cow position: chr3:54100891-54100656 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 18, 117

Conread position: 157-391
Cow position: chr3:48810805-48810573 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 168, 61

Conread position: 158-370
Cow position: chr3:26489252-26489029 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 158-381
Cow position: chr3:30222018-30222253 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 158-388
Cow position: chr3:15153524-15153760 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 64

Conread position: 158-391
Cow position: chr3:35153454-35153689 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 120, 46

Conread position: 158-391
Cow position: chr3:55109782-55109541 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 105, 14

Conread position: 159-391
Cow position: chr3:68616491-68616258 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 125, 60

Conread position: 161-381
Cow position: chr3:59884237-59884007 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 162-391
Cow position: chr3:53508458-53508683 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 73

Conread position: 163-381
Cow position: chr3:55177915-55177684 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 163-388
Cow position: chr3:75238298-75238526 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 11

Conread position: 164-314
Cow position: chr3:27247350-27247200 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 109, 5

Conread position: 164-390
Cow position: chr3:58765238-58765004 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 97, 27

Conread position: 165-339
Cow position: chr3:9638531-9638359 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 29

Conread position: 165-391
Cow position: chr3:58973143-58973368 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 103, 59

Conread position: 165-391
Cow position: chr3:74242835-74243065 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 60

Conread position: 166-387
Cow position: chr3:84199520-84199744 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 110, 26

Conread position: 166-388
Cow position: chr3:59034874-59035109 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 166-391
Cow position: chr3:73742014-73741798 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 165, 69

Conread position: 166-452
Cow position: chr3:2851054-2850751 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 21, 55

Conread position: 167-391
Cow position: chr3:77581950-77582177 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 168-379
Cow position: chr3:24468536-24468325 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 179, 101

Conread position: 168-391
Cow position: chr3:19585704-19585935 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 176

Conread position: 169-361
Cow position: chr3:12978773-12978576 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 101

Conread position: 170-377
Cow position: chr3:11200139-11199921 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 170-381
Cow position: chr3:62789335-62789113 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 171-391
Cow position: chr3:46541982-46541757 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 78

Conread position: 171-400
Cow position: chr3:25250754-25250982 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 38

Conread position: 172-318
Cow position: chr3:18056290-18056432 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 172-369
Cow position: chr3:79271112-79270907 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 172-370
Cow position: chr3:81039899-81039697 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 98

Conread position: 172-388
Cow position: chr3:19793746-19793522 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 84

Conread position: 172-391
Cow position: chr3:79645597-79645358 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 51

Conread position: 173-382
Cow position: chr3:70334117-70333902 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 12, 86

Conread position: 173-388
Cow position: chr3:23920582-23920360 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 86

Conread position: 175-314
Cow position: chr3:6900482-6900618 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 176-317
Cow position: chr3:11198924-11198790 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 176-391
Cow position: chr3:17058688-17058474 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 152, 13

Conread position: 177-379
Cow position: chr3:72342096-72342305 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 177-393
Cow position: chr3:5366622-5366841 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 160, 96

Conread position: 178-391
Cow position: chr3:79196612-79196831 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 94, 69

Conread position: 179-384
Cow position: chr3:34871422-34871630 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 41

Conread position: 179-391
Cow position: chr3:22221173-22221399 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 7, 28

Conread position: 180-335
Cow position: chr3:28323040-28323190 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 11

Conread position: 181-380
Cow position: chr3:35056125-35055913 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 181-391
Cow position: chr3:20993667-20993885 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 66

Conread position: 182-371
Cow position: chr3:1785385-1785193 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 48

Conread position: 183-349
Cow position: chr3:50328751-50328595 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 184-317
Cow position: chr3:1534761-1534624 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 184-323
Cow position: chr3:15790419-15790553 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 184-352
Cow position: chr3:80953505-80953680 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 184-366
Cow position: chr3:43726936-43727126 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 28

Conread position: 184-377
Cow position: chr3:47417707-47417514 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 77, 138

Conread position: 184-384
Cow position: chr3:3889708-3889503 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 52

Conread position: 184-385
Cow position: chr3:1517655-1517446 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 33, 68

Conread position: 184-385
Cow position: chr3:21015101-21014890 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 15

Conread position: 184-388
Cow position: chr3:15443870-15443660 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 7

Conread position: 184-389
Cow position: chr3:73820511-73820299 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 76, 52

Conread position: 184-390
Cow position: chr3:73237053-73237267 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 85, 39

Conread position: 184-391
Cow position: chr3:48900479-48900261 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 84, 33

Conread position: 184-400
Cow position: chr3:71238332-71238550 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 92, 0

Conread position: 185-381
Cow position: chr3:78093524-78093327 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 145, 75

Conread position: 185-390
Cow position: chr3:18426840-18426638 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 87

Conread position: 185-391
Cow position: chr3:74584077-74584279 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 51

Conread position: 186-316
Cow position: chr3:76169424-76169293 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 186-362
Cow position: chr3:17235348-17235168 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 132, 26

Conread position: 187-391
Cow position: chr3:74846849-74846637 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 51

Conread position: 189-389
Cow position: chr3:32457064-32457263 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 81

Conread position: 189-391
Cow position: chr3:76024383-76024577 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 136, 46

Conread position: 192-318
Cow position: chr3:54552014-54551888 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 81

Conread position: 192-319
Cow position: chr3:6885930-6886056 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 27

Conread position: 192-391
Cow position: chr3:84175959-84175751 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 194-388
Cow position: chr3:72504030-72503827 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 6

Conread position: 195-377
Cow position: chr3:64526717-64526906 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 103

Conread position: 195-380
Cow position: chr3:59040437-59040630 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 195-385
Cow position: chr3:61116988-61116787 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 195-388
Cow position: chr3:22509896-22510094 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 174

Conread position: 195-447
Cow position: chr3:81337133-81337397 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 71, 100

Conread position: 196-371
Cow position: chr3:11276700-11276534 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 153, 39

Conread position: 196-391
Cow position: chr3:16254953-16254769 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 196-391
Cow position: chr3:60389638-60389836 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 122, 53

Conread position: 197-391
Cow position: chr3:14194307-14194107 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 65, 9

Conread position: 197-391
Cow position: chr3:73298958-73299150 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 138, 73

Conread position: 198-388
Cow position: chr3:56678481-56678281 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 196

Conread position: 199-379
Cow position: chr3:35621176-35621361 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 75, 0

Conread position: 199-381
Cow position: chr3:12670741-12670553 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 27

Conread position: 199-386
Cow position: chr3:58134814-58134619 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 200-381
Cow position: chr3:8901517-8901691 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 63

Conread position: 202-391
Cow position: chr3:10103924-10104112 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 29

Conread position: 204-406
Cow position: chr3:63177357-63177570 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 205-391
Cow position: chr3:58527277-58527454 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 30

Conread position: 206-391
Cow position: chr3:15951031-15950841 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 119, 62

Conread position: 207-391
Cow position: chr3:33693699-33693891 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 50, 70

Conread position: 208-381
Cow position: chr3:3656393-3656576 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 208-390
Cow position: chr3:58318071-58317877 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 214-388
Cow position: chr3:18059590-18059772 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 37

Conread position: 215-391
Cow position: chr3:27727940-27727759 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 51, 31

Conread position: 216-370
Cow position: chr3:44234610-44234762 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 50

Conread position: 217-390
Cow position: chr3:65019974-65019794 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 217-391
Cow position: chr3:55983986-55984170 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 219-388
Cow position: chr3:61262964-61263126 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 32

Conread position: 220-391
Cow position: chr3:3316918-3316744 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 96, 57

Conread position: 220-391
Cow position: chr3:22165523-22165344 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 40

Conread position: 237-378
Cow position: chr3:74900727-74900581 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 91, 35

Conread position: 238-389
Cow position: chr3:81277558-81277398 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 240-381
Cow position: chr3:23667537-23667683 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 30

Conread position: 240-391
Cow position: chr3:53704052-53703891 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 246-385
Cow position: chr3:27976606-27976458 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 247-381
Cow position: chr3:10668958-10668820 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 247-450
Cow position: chr3:45222234-45222021 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 152

Conread position: 249-376
Cow position: chr3:14546924-14547057 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 127

Conread position: 265-391
Cow position: chr3:10026744-10026619 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 11

Conread position: 266-391
Cow position: chr3:81234330-81234461 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 56

Conread position: 267-391
Cow position: chr3:68130342-68130219 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 109

Conread position: 271-389
Cow position: chr3:11292302-11292178 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 272-381
Cow position: chr3:7427949-7428060 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 272-391
Cow position: chr3:21997841-21997716 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 272-391
Cow position: chr3:71423605-71423483 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 278-390
Cow position: chr3:5040354-5040237 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.