Non-Coding RNA Search

Cow genome map


           Conread name:
           Pig2-92G10
        

               Conread position:
               1-281
               

               Cow position:
               chr5:27690344-27690054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               41, 205
               

               Conread position:
               1-364
               

               Cow position:
               chr5:5111358-5110979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 181
               

               Conread position:
               1-380
               

               Cow position:
               chr5:50722769-50723157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 110
               

               Conread position:
               1-388
               

               Cow position:
               chr5:15478827-15479244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 242
               

               Conread position:
               1-391
               

               Cow position:
               chr5:26990111-26990510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 162
               

               Conread position:
               2-307
               

               Cow position:
               chr5:49820862-49821172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 119
               

               Conread position:
               2-308
               

               Cow position:
               chr5:6130076-6130387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               2-308
               

               Cow position:
               chr5:58004964-58005279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 219
               

               Conread position:
               2-321
               

               Cow position:
               chr5:4797593-4797277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 158
               

               Conread position:
               2-337
               

               Cow position:
               chr5:72287199-72286852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               50, 160
               

               Conread position:
               2-344
               

               Cow position:
               chr5:32378592-32378916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               2-363
               

               Cow position:
               chr5:65593597-65593962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               2-381
               

               Cow position:
               chr5:41604330-41604735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 316
               

               Conread position:
               2-381
               

               Cow position:
               chr5:56467424-56467802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 144
               

               Conread position:
               2-381
               

               Cow position:
               chr5:61839908-61840304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 277
               

               Conread position:
               2-381
               

               Cow position:
               chr5:67212101-67212473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               2-388
               

               Cow position:
               chr5:68604573-68604972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               276
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               26, 270
               

               Conread position:
               2-390
               

               Cow position:
               chr5:24175091-24175496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 164
               

               Conread position:
               2-391
               

               Cow position:
               chr5:17027818-17028217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 151
               

               Conread position:
               2-391
               

               Cow position:
               chr5:21040253-21039861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 32
               

               Conread position:
               2-391
               

               Cow position:
               chr5:27420001-27419607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 66
               

               Conread position:
               2-391
               

               Cow position:
               chr5:34442073-34441658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 161
               

               Conread position:
               2-391
               

               Cow position:
               chr5:37645785-37646203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               2-391
               

               Cow position:
               chr5:37758084-37757717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               289
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               2-391
               

               Cow position:
               chr5:43923429-43923040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 119
               

               Conread position:
               2-391
               

               Cow position:
               chr5:60715635-60715246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               2-391
               

               Cow position:
               chr5:72564479-72564886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               2-393
               

               Cow position:
               chr5:58793895-58793483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 174
               

               Conread position:
               2-398
               

               Cow position:
               chr5:34183933-34184352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 289
               

               Conread position:
               2-445
               

               Cow position:
               chr5:42667672-42667199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               3-245
               

               Cow position:
               chr5:63917686-63917441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 38
               

               Conread position:
               3-253
               

               Cow position:
               chr5:8178903-8179160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-259
               

               Cow position:
               chr5:4507240-4506971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-400
               

               Cow position:
               chr5:27615223-27615641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               296
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               44, 166
               

               Conread position:
               4-215
               

               Cow position:
               chr5:41981123-41981336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 126
               

               Conread position:
               4-227
               

               Cow position:
               chr5:54875955-54875728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               4-233
               

               Cow position:
               chr5:14415491-14415736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 126
               

               Conread position:
               4-237
               

               Cow position:
               chr5:15462447-15462676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               77, 29
               

               Conread position:
               4-249
               

               Cow position:
               chr5:49558884-49559142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               4-250
               

               Cow position:
               chr5:59298237-59297985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 215
               

               Conread position:
               4-253
               

               Cow position:
               chr5:12640507-12640259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               4-253
               

               Cow position:
               chr5:34709514-34709774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               43, 69
               

               Conread position:
               4-253
               

               Cow position:
               chr5:47559814-47559559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               4-254
               

               Cow position:
               chr5:28330607-28330355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               4-254
               

               Cow position:
               chr5:31469861-31469604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 75
               

               Conread position:
               4-260
               

               Cow position:
               chr5:30816437-30816703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 179
               

               Conread position:
               4-260
               

               Cow position:
               chr5:38831273-38831010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               4-261
               

               Cow position:
               chr5:55942676-55942412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 261
               

               Conread position:
               4-261
               

               Cow position:
               chr5:60519897-60520147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               4-293
               

               Cow position:
               chr5:42747884-42748176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 5
               

               Conread position:
               4-300
               

               Cow position:
               chr5:50950275-50950579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 294
               

               Conread position:
               4-304
               

               Cow position:
               chr5:62827033-62826723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               4-307
               

               Cow position:
               chr5:34288745-34288436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               4-308
               

               Cow position:
               chr5:51357780-51357468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               4-310
               

               Cow position:
               chr5:62107773-62107455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               4-314
               

               Cow position:
               chr5:6086840-6086521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 262
               

               Conread position:
               4-314
               

               Cow position:
               chr5:23856441-23856121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 134
               

               Conread position:
               4-315
               

               Cow position:
               chr5:34915864-34916171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 145
               

               Conread position:
               4-318
               

               Cow position:
               chr5:19470461-19470148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               4-319
               

               Cow position:
               chr5:16184814-16185132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               4-322
               

               Cow position:
               chr5:24485688-24485387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               4-323
               

               Cow position:
               chr5:59443529-59443204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 233
               

               Conread position:
               4-325
               

               Cow position:
               chr5:21944103-21944448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 184
               

               Conread position:
               4-326
               

               Cow position:
               chr5:54126802-54127124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 133
               

               Conread position:
               4-327
               

               Cow position:
               chr5:3281146-3280820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 148
               

               Conread position:
               4-328
               

               Cow position:
               chr5:27403518-27403176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               4-329
               

               Cow position:
               chr5:54714020-54713677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               4-330
               

               Cow position:
               chr5:27015414-27015735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 74
               

               Conread position:
               4-331
               

               Cow position:
               chr5:10261520-10261177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 233
               

               Conread position:
               4-334
               

               Cow position:
               chr5:41951359-41951037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               4-335
               

               Cow position:
               chr5:47313195-47313533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 127
               

               Conread position:
               4-335
               

               Cow position:
               chr5:54405172-54404830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 165
               

               Conread position:
               4-335
               

               Cow position:
               chr5:56443003-56443335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               77, 29
               

               Conread position:
               4-338
               

               Cow position:
               chr5:45170083-45170422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 203
               

               Conread position:
               4-339
               

               Cow position:
               chr5:4952478-4952816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 69
               

               Conread position:
               4-347
               

               Cow position:
               chr5:20555027-20554678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 216
               

               Conread position:
               4-353
               

               Cow position:
               chr5:13691854-13691485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               4-358
               

               Cow position:
               chr5:31145060-31144698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 64
               

               Conread position:
               4-358
               

               Cow position:
               chr5:75829009-75828661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               4-360
               

               Cow position:
               chr5:5938046-5938413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 223
               

               Conread position:
               4-361
               

               Cow position:
               chr5:34528286-34528639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               4-367
               

               Cow position:
               chr5:16508818-16509204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               4-368
               

               Cow position:
               chr5:12873470-12873850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               4-368
               

               Cow position:
               chr5:23140856-23140490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               45, 160
               

               Conread position:
               4-368
               

               Cow position:
               chr5:57327510-57327900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 271
               

               Conread position:
               4-369
               

               Cow position:
               chr5:21524886-21525259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 269
               

               Conread position:
               4-369
               

               Cow position:
               chr5:47704413-47704026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               4-370
               

               Cow position:
               chr5:3281553-3281936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 217
               

               Conread position:
               4-370
               

               Cow position:
               chr5:34463867-34463477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               4-372
               

               Cow position:
               chr5:9090298-9089920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               4-372
               

               Cow position:
               chr5:45845971-45845588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 233
               

               Conread position:
               4-372
               

               Cow position:
               chr5:47871328-47870939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 357
               

               Conread position:
               4-373
               

               Cow position:
               chr5:29903800-29903419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 105
               

               Conread position:
               4-373
               

               Cow position:
               chr5:65752581-65752964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               4-377
               

               Cow position:
               chr5:18573892-18574280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 223
               

               Conread position:
               4-377
               

               Cow position:
               chr5:39936825-39937223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 212
               

               Conread position:
               4-378
               

               Cow position:
               chr5:3204560-3204937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               4-379
               

               Cow position:
               chr5:39447813-39447425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 246
               

               Conread position:
               4-380
               

               Cow position:
               chr5:30486973-30487345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               4-381
               

               Cow position:
               chr5:14314244-14314640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 296
               

               Conread position:
               4-381
               

               Cow position:
               chr5:16894047-16893659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               4-381
               

               Cow position:
               chr5:20407941-20407566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 247
               

               Conread position:
               4-381
               

               Cow position:
               chr5:26094447-26094054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 244
               

               Conread position:
               4-381
               

               Cow position:
               chr5:26467344-26467740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 67
               

               Conread position:
               4-381
               

               Cow position:
               chr5:28927875-28927482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 354
               

               Conread position:
               4-381
               

               Cow position:
               chr5:30276417-30276802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 264
               

               Conread position:
               4-381
               

               Cow position:
               chr5:41546168-41545781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 197
               

               Conread position:
               4-381
               

               Cow position:
               chr5:57935391-57934996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 36
               

               Conread position:
               4-385
               

               Cow position:
               chr5:6504148-6503765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 48
               

               Conread position:
               4-385
               

               Cow position:
               chr5:52645358-52644964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 145
               

               Conread position:
               4-385
               

               Cow position:
               chr5:63964459-63964049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 258
               

               Conread position:
               4-386
               

               Cow position:
               chr5:38853081-38853466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 244
               

               Conread position:
               4-386
               

               Cow position:
               chr5:39094275-39094667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 127
               

               Conread position:
               4-386
               

               Cow position:
               chr5:48828869-48829271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 244
               

               Conread position:
               4-386
               

               Cow position:
               chr5:60952384-60952777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               37, 199
               

               Conread position:
               4-388
               

               Cow position:
               chr5:360223-359820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               4-388
               

               Cow position:
               chr5:14904334-14903949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 35
               

               Conread position:
               4-388
               

               Cow position:
               chr5:24348838-24349226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               4-388
               

               Cow position:
               chr5:45226107-45225698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 118
               

               Conread position:
               4-388
               

               Cow position:
               chr5:47317246-47316855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 157
               

               Conread position:
               4-388
               

               Cow position:
               chr5:64524157-64523744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               4-390
               

               Cow position:
               chr5:35145072-35145449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 160
               

               Conread position:
               4-390
               

               Cow position:
               chr5:47601533-47601933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 270
               

               Conread position:
               4-391
               

               Cow position:
               chr5:3582301-3582682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               4-391
               

               Cow position:
               chr5:4218603-4218979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               4-391
               

               Cow position:
               chr5:12323072-12322685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 31
               

               Conread position:
               4-391
               

               Cow position:
               chr5:15363615-15364004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               4-391
               

               Cow position:
               chr5:16206420-16206033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               4-391
               

               Cow position:
               chr5:21617177-21617580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 208
               

               Conread position:
               4-391
               

               Cow position:
               chr5:29771240-29771650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 203
               

               Conread position:
               4-391
               

               Cow position:
               chr5:35826315-35826724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               4-391
               

               Cow position:
               chr5:44054313-44053933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               4-391
               

               Cow position:
               chr5:44752590-44752185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 231
               

               Conread position:
               4-391
               

               Cow position:
               chr5:44796993-44796611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               4-391
               

               Cow position:
               chr5:46104218-46103839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 170
               

               Conread position:
               4-391
               

               Cow position:
               chr5:46611362-46610976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               68, 35
               

               Conread position:
               4-391
               

               Cow position:
               chr5:52165457-52165057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 36
               

               Conread position:
               4-391
               

               Cow position:
               chr5:58855824-58856224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               4-391
               

               Cow position:
               chr5:72035363-72034979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 69
               

               Conread position:
               4-392
               

               Cow position:
               chr5:65941531-65941127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               4-400
               

               Cow position:
               chr5:46510146-46509734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 205
               

               Conread position:
               4-401
               

               Cow position:
               chr5:66815859-66815439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 128
               

               Conread position:
               5-252
               

               Cow position:
               chr5:28016882-28017124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               145, 34
               

               Conread position:
               5-317
               

               Cow position:
               chr5:20344892-20345204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               5-361
               

               Cow position:
               chr5:40889560-40889205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 223
               

               Conread position:
               5-379
               

               Cow position:
               chr5:65887291-65886900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 279
               

               Conread position:
               5-385
               

               Cow position:
               chr5:37190370-37189981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               5-385
               

               Cow position:
               chr5:42063926-42064321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 131
               

               Conread position:
               5-391
               

               Cow position:
               chr5:4710418-4710030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 105
               

               Conread position:
               5-391
               

               Cow position:
               chr5:39258276-39258627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 28
               

               Conread position:
               5-391
               

               Cow position:
               chr5:43858705-43858298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 116
               

               Conread position:
               5-391
               

               Cow position:
               chr5:50599789-50600170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               5-391
               

               Cow position:
               chr5:50821511-50821905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 119
               

               Conread position:
               6-259
               

               Cow position:
               chr5:45705771-45706029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 211
               

               Conread position:
               6-300
               

               Cow position:
               chr5:58460681-58460372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               6-300
               

               Cow position:
               chr5:72149975-72150275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 139
               

               Conread position:
               6-320
               

               Cow position:
               chr5:7921658-7921359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               6-366
               

               Cow position:
               chr5:3242741-3242384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 60
               

               Conread position:
               6-381
               

               Cow position:
               chr5:6896408-6896015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               6-385
               

               Cow position:
               chr5:58519675-58519300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 107
               

               Conread position:
               6-388
               

               Cow position:
               chr5:6528404-6528804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 215
               

               Conread position:
               6-389
               

               Cow position:
               chr5:43457793-43457411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 212
               

               Conread position:
               6-391
               

               Cow position:
               chr5:12352058-12351686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               6-391
               

               Cow position:
               chr5:50533657-50533266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               6-391
               

               Cow position:
               chr5:55176616-55177008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 45
               

               Conread position:
               6-452
               

               Cow position:
               chr5:65933204-65932744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               7-390
               

               Cow position:
               chr5:3491926-3492295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 138
               

               Conread position:
               8-391
               

               Cow position:
               chr5:63987721-63987324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 137
               

               Conread position:
               10-390
               

               Cow position:
               chr5:9894399-9894002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 111
               

               Conread position:
               12-391
               

               Cow position:
               chr5:29827783-29828168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 133
               

               Conread position:
               12-391
               

               Cow position:
               chr5:64176389-64176004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               13-249
               

               Cow position:
               chr5:12672291-12672057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               13-268
               

               Cow position:
               chr5:31020383-31020146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               13-281
               

               Cow position:
               chr5:70290216-70290485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 141
               

               Conread position:
               13-370
               

               Cow position:
               chr5:33414674-33414310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 101
               

               Conread position:
               13-370
               

               Cow position:
               chr5:65601194-65601558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               13-373
               

               Cow position:
               chr5:66257376-66257740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               13-377
               

               Cow position:
               chr5:42845869-42845483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 157
               

               Conread position:
               13-379
               

               Cow position:
               chr5:26377933-26377557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               13-381
               

               Cow position:
               chr5:20783357-20783734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 225
               

               Conread position:
               13-381
               

               Cow position:
               chr5:30302629-30303003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               13-381
               

               Cow position:
               chr5:66366265-66366621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               276
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               13-385
               

               Cow position:
               chr5:17999765-17999380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               13-386
               

               Cow position:
               chr5:12149277-12149663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 139
               

               Conread position:
               13-386
               

               Cow position:
               chr5:61576270-61576662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 256
               

               Conread position:
               13-388
               

               Cow position:
               chr5:14550855-14550465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 268
               

               Conread position:
               13-388
               

               Cow position:
               chr5:53855435-53855825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               13-389
               

               Cow position:
               chr5:28224186-28224572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               13-389
               

               Cow position:
               chr5:44848280-44847901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 38
               

               Conread position:
               13-392
               

               Cow position:
               chr5:6045017-6045419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               14-283
               

               Cow position:
               chr5:9074002-9073724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 196
               

               Conread position:
               14-323
               

               Cow position:
               chr5:26790712-26790407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 21
               

               Conread position:
               14-325
               

               Cow position:
               chr5:42676969-42677284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               14-380
               

               Cow position:
               chr5:55068453-55068817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 38
               

               Conread position:
               14-384
               

               Cow position:
               chr5:55756709-55756300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               14-386
               

               Cow position:
               chr5:26133342-26132980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 181
               

               Conread position:
               14-388
               

               Cow position:
               chr5:32394330-32394718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               278
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               42, 145
               

               Conread position:
               15-304
               

               Cow position:
               chr5:2288827-2288520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               15-334
               

               Cow position:
               chr5:50483129-50482808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 153
               

               Conread position:
               15-381
               

               Cow position:
               chr5:63992431-63992060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 197
               

               Conread position:
               15-391
               

               Cow position:
               chr5:15598501-15598116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 157
               

               Conread position:
               16-233
               

               Cow position:
               chr5:50864094-50864329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               16-315
               

               Cow position:
               chr5:47888981-47888671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               16-381
               

               Cow position:
               chr5:22934722-22934344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 231
               

               Conread position:
               16-381
               

               Cow position:
               chr5:64139297-64139672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 242
               

               Conread position:
               16-385
               

               Cow position:
               chr5:60210405-60210027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               17-226
               

               Cow position:
               chr5:23666527-23666308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               17-349
               

               Cow position:
               chr5:32140970-32140630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               17-372
               

               Cow position:
               chr5:35208000-35208364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               17-380
               

               Cow position:
               chr5:50637566-50637932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 137
               

               Conread position:
               17-459
               

               Cow position:
               chr5:46122607-46122172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               18-380
               

               Cow position:
               chr5:41164827-41165199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               19-244
               

               Cow position:
               chr5:69099263-69099500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               19-329
               

               Cow position:
               chr5:44583381-44583079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 125
               

               Conread position:
               19-390
               

               Cow position:
               chr5:28946322-28945939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               20-347
               

               Cow position:
               chr5:58229441-58229772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               23, 127
               

               Conread position:
               20-386
               

               Cow position:
               chr5:34049847-34050235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               20-391
               

               Cow position:
               chr5:27103055-27102672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 135
               

               Conread position:
               21-253
               

               Cow position:
               chr5:1338164-1337921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               26, 142
               

               Conread position:
               21-359
               

               Cow position:
               chr5:34638624-34638972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               22-247
               

               Cow position:
               chr5:37366630-37366872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               25-254
               

               Cow position:
               chr5:50729238-50729472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 219
               

               Conread position:
               25-332
               

               Cow position:
               chr5:50900653-50900955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               25-334
               

               Cow position:
               chr5:1766599-1766290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               25-389
               

               Cow position:
               chr5:19278950-19278586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               26, 102
               

               Conread position:
               26-334
               

               Cow position:
               chr5:43474591-43474907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 251
               

               Conread position:
               27-256
               

               Cow position:
               chr5:61656351-61656585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               21, 180
               

               Conread position:
               27-261
               

               Cow position:
               chr5:6575837-6575606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               27-369
               

               Cow position:
               chr5:26370452-26370783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               28-366
               

               Cow position:
               chr5:50975633-50975993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               28-381
               

               Cow position:
               chr5:31640173-31640537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 172
               

               Conread position:
               31-377
               

               Cow position:
               chr5:11229924-11229565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 256
               

               Conread position:
               31-389
               

               Cow position:
               chr5:59326079-59325722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               32-370
               

               Cow position:
               chr5:61600162-61600508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 241
               

               Conread position:
               32-389
               

               Cow position:
               chr5:28302990-28302623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 155
               

               Conread position:
               34-257
               

               Cow position:
               chr5:63388547-63388775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               7, 38
               

               Conread position:
               34-329
               

               Cow position:
               chr5:3004468-3004777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               37-393
               

               Cow position:
               chr5:32956335-32955972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               39-223
               

               Cow position:
               chr5:32087962-32087767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               40-221
               

               Cow position:
               chr5:62261633-62261811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               40-255
               

               Cow position:
               chr5:48178916-48178698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 31
               

               Conread position:
               40-317
               

               Cow position:
               chr5:53842051-53842323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 37
               

               Conread position:
               40-381
               

               Cow position:
               chr5:29353369-29353013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 70
               

               Conread position:
               40-381
               

               Cow position:
               chr5:53835475-53835828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               40-387
               

               Cow position:
               chr5:31918413-31918759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 103
               

               Conread position:
               40-389
               

               Cow position:
               chr5:8024427-8024080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 14
               

               Conread position:
               40-391
               

               Cow position:
               chr5:37377638-37377975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 100
               

               Conread position:
               40-391
               

               Cow position:
               chr5:67932701-67932350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               41-272
               

               Cow position:
               chr5:32963868-32963635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 152
               

               Conread position:
               41-379
               

               Cow position:
               chr5:22839712-22839364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               41, 159
               

               Conread position:
               41-381
               

               Cow position:
               chr5:37646791-37646432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 138
               

               Conread position:
               41-381
               

               Cow position:
               chr5:55967122-55966768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               41-391
               

               Cow position:
               chr5:28229918-28230286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 140
               

               Conread position:
               43-369
               

               Cow position:
               chr5:48144028-48143689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               29, 262
               

               Conread position:
               43-393
               

               Cow position:
               chr5:65588475-65588823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 35
               

               Conread position:
               44-317
               

               Cow position:
               chr5:30639086-30638821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               44-329
               

               Cow position:
               chr5:34115426-34115708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               44-329
               

               Cow position:
               chr5:54064543-54064830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               44-335
               

               Cow position:
               chr5:2500417-2500119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 27
               

               Conread position:
               44-335
               

               Cow position:
               chr5:34885392-34885103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 181
               

               Conread position:
               44-335
               

               Cow position:
               chr5:56433565-56433861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 232
               

               Conread position:
               44-340
               

               Cow position:
               chr5:58144842-58144533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               44-380
               

               Cow position:
               chr5:69337596-69337931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               44-381
               

               Cow position:
               chr5:25035463-25035146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               44-381
               

               Cow position:
               chr5:40109265-40109604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 75
               

               Conread position:
               44-381
               

               Cow position:
               chr5:65776622-65776273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               44-384
               

               Cow position:
               chr5:32975787-32975445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               44-390
               

               Cow position:
               chr5:11668414-11668064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 107
               

               Conread position:
               44-391
               

               Cow position:
               chr5:30844876-30845232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               44-391
               

               Cow position:
               chr5:35684698-35685057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 182
               

               Conread position:
               44-391
               

               Cow position:
               chr5:51999983-52000340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               44-410
               

               Cow position:
               chr5:43738184-43737822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               45-221
               

               Cow position:
               chr5:24837175-24837001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               45-237
               

               Cow position:
               chr5:24642957-24642765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 123
               

               Conread position:
               45-240
               

               Cow position:
               chr5:12563241-12563042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               31, 180
               

               Conread position:
               45-261
               

               Cow position:
               chr5:40357106-40356880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 73
               

               Conread position:
               45-311
               

               Cow position:
               chr5:45036785-45037050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 160
               

               Conread position:
               45-321
               

               Cow position:
               chr5:37714140-37713848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               32, 178
               

               Conread position:
               45-329
               

               Cow position:
               chr5:55088910-55089195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               167, 32
               

               Conread position:
               45-364
               

               Cow position:
               chr5:73079977-73080300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               45-381
               

               Cow position:
               chr5:26046099-26046434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               31, 219
               

               Conread position:
               45-381
               

               Cow position:
               chr5:30253510-30253853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               45-381
               

               Cow position:
               chr5:34300690-34301028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 75
               

               Conread position:
               45-381
               

               Cow position:
               chr5:37814388-37814738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               45-381
               

               Cow position:
               chr5:67243689-67244030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 183
               

               Conread position:
               45-387
               

               Cow position:
               chr5:54350596-54350243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 99
               

               Conread position:
               45-388
               

               Cow position:
               chr5:17063329-17062962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 265
               

               Conread position:
               45-389
               

               Cow position:
               chr5:54311098-54311456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               45-391
               

               Cow position:
               chr5:42744562-42744902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 71
               

               Conread position:
               45-391
               

               Cow position:
               chr5:49685516-49685153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 342
               

               Conread position:
               45-398
               

               Cow position:
               chr5:31660873-31660528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               7, 35
               

               Conread position:
               46-386
               

               Cow position:
               chr5:68871958-68872310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               31, 56
               

               Conread position:
               46-390
               

               Cow position:
               chr5:46323046-46322682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 135
               

               Conread position:
               46-391
               

               Cow position:
               chr5:4032223-4031864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 76
               

               Conread position:
               46-391
               

               Cow position:
               chr5:24996458-24996101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               46-391
               

               Cow position:
               chr5:43992091-43992446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               47-323
               

               Cow position:
               chr5:42777531-42777813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               47-332
               

               Cow position:
               chr5:56135202-56134911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 171
               

               Conread position:
               47-377
               

               Cow position:
               chr5:75437130-75436779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               47-381
               

               Cow position:
               chr5:36854979-36855318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               47-382
               

               Cow position:
               chr5:4617144-4617479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 97
               

               Conread position:
               47-388
               

               Cow position:
               chr5:28324112-28324452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 24
               

               Conread position:
               47-391
               

               Cow position:
               chr5:6683581-6683245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               47-391
               

               Cow position:
               chr5:72007086-72006743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 107
               

               Conread position:
               47-401
               

               Cow position:
               chr5:1344091-1343724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               47-406
               

               Cow position:
               chr5:32339208-32338828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               26, 203
               

               Conread position:
               47-457
               

               Cow position:
               chr5:15426295-15426741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               48-329
               

               Cow position:
               chr5:21964059-21964343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 91
               

               Conread position:
               48-344
               

               Cow position:
               chr5:3627400-3627084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               26, 307
               

               Conread position:
               48-377
               

               Cow position:
               chr5:41636641-41636975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               48-388
               

               Cow position:
               chr5:20127822-20128171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               49-339
               

               Cow position:
               chr5:12709655-12709953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               49-364
               

               Cow position:
               chr5:40388097-40387785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 82
               

               Conread position:
               49-386
               

               Cow position:
               chr5:64137020-64137373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               49-390
               

               Cow position:
               chr5:20779611-20779277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               49-391
               

               Cow position:
               chr5:7723441-7723787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 192
               

               Conread position:
               49-391
               

               Cow position:
               chr5:16938239-16937907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               50-323
               

               Cow position:
               chr5:1779491-1779237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               50-381
               

               Cow position:
               chr5:3771616-3771958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 262
               

               Conread position:
               50-381
               

               Cow position:
               chr5:22243015-22242653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               50-389
               

               Cow position:
               chr5:26477223-26476898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               27, 81
               

               Conread position:
               50-391
               

               Cow position:
               chr5:44994267-44993927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 188
               

               Conread position:
               50-391
               

               Cow position:
               chr5:57074565-57074209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 194
               

               Conread position:
               50-391
               

               Cow position:
               chr5:62172188-62172534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               50-446
               

               Cow position:
               chr5:55821138-55821535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               10, 318
               

               Conread position:
               51-227
               

               Cow position:
               chr5:66297009-66297189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 127
               

               Conread position:
               51-362
               

               Cow position:
               chr5:28926414-28926090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               51-381
               

               Cow position:
               chr5:54086311-54086650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 27
               

               Conread position:
               51-381
               

               Cow position:
               chr5:56070624-56070971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               51-388
               

               Cow position:
               chr5:32697042-32696704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               51-391
               

               Cow position:
               chr5:27154793-27155127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               51-391
               

               Cow position:
               chr5:27172190-27171871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 86
               

               Conread position:
               52-357
               

               Cow position:
               chr5:65765340-65765043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               52-391
               

               Cow position:
               chr5:19813440-19813098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 71
               

               Conread position:
               52-391
               

               Cow position:
               chr5:21828636-21828989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 311
               

               Conread position:
               52-391
               

               Cow position:
               chr5:71454824-71454490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 169
               

               Conread position:
               53-317
               

               Cow position:
               chr5:51490981-51490722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               53-365
               

               Cow position:
               chr5:56820487-56820168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               54-267
               

               Cow position:
               chr5:31434039-31434252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               23, 185
               

               Conread position:
               54-328
               

               Cow position:
               chr5:18090501-18090791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               54-380
               

               Cow position:
               chr5:1247050-1247374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               54-391
               

               Cow position:
               chr5:26262896-26262557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               55-365
               

               Cow position:
               chr5:741174-740844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               22, 207
               

               Conread position:
               55-377
               

               Cow position:
               chr5:25495563-25495250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               55-391
               

               Cow position:
               chr5:5257522-5257166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 136
               

               Conread position:
               55-391
               

               Cow position:
               chr5:27306093-27306426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               56-391
               

               Cow position:
               chr5:27411614-27411279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               56-393
               

               Cow position:
               chr5:37425519-37425868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               22, 143
               

               Conread position:
               57-254
               

               Cow position:
               chr5:9024482-9024288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               57-381
               

               Cow position:
               chr5:15722277-15721962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               57-389
               

               Cow position:
               chr5:48757721-48758060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               57-391
               

               Cow position:
               chr5:35969323-35969654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 151
               

               Conread position:
               58-405
               

               Cow position:
               chr5:54111696-54112050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               59-334
               

               Cow position:
               chr5:40152254-40152537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               59-391
               

               Cow position:
               chr5:16025682-16025346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 179
               

               Conread position:
               59-391
               

               Cow position:
               chr5:56028751-56028419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 181
               

               Conread position:
               60-389
               

               Cow position:
               chr5:2309785-2309436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 197
               

               Conread position:
               62-229
               

               Cow position:
               chr5:66281011-66280838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               63-323
               

               Cow position:
               chr5:60126156-60126421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               63-338
               

               Cow position:
               chr5:4322198-4322467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               64-338
               

               Cow position:
               chr5:49362207-49361929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               69-314
               

               Cow position:
               chr5:8994773-8994526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 126
               

               Conread position:
               69-389
               

               Cow position:
               chr5:51053857-51053529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 151
               

               Conread position:
               70-385
               

               Cow position:
               chr5:55928741-55929060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 17
               

               Conread position:
               70-391
               

               Cow position:
               chr5:57736907-57737221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               70-391
               

               Cow position:
               chr5:64758970-64758645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 51
               

               Conread position:
               71-373
               

               Cow position:
               chr5:40039976-40039662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 79
               

               Conread position:
               71-380
               

               Cow position:
               chr5:11427447-11427121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr5:50215763-50215451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               72-389
               

               Cow position:
               chr5:458278-458608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 8
               

               Conread position:
               73-261
               

               Cow position:
               chr5:5848390-5848204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               157, 58
               

               Conread position:
               73-264
               

               Cow position:
               chr5:72845976-72845792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               119, 57
               

               Conread position:
               73-386
               

               Cow position:
               chr5:44049499-44049815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               74-246
               

               Cow position:
               chr5:19078911-19079084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 84
               

               Conread position:
               75-328
               

               Cow position:
               chr5:1027893-1027641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               75, 46
               

               Conread position:
               78-253
               

               Cow position:
               chr5:55950218-55950059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               78-271
               

               Cow position:
               chr5:71158462-71158266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               78-317
               

               Cow position:
               chr5:43395336-43395107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               113, 33
               

               Conread position:
               78-328
               

               Cow position:
               chr5:35235907-35235656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 130
               

               Conread position:
               78-335
               

               Cow position:
               chr5:28456610-28456345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 203
               

               Conread position:
               78-335
               

               Cow position:
               chr5:28459912-28459646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               11, 204
               

               Conread position:
               78-338
               

               Cow position:
               chr5:75230485-75230734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               113, 53
               

               Conread position:
               78-347
               

               Cow position:
               chr5:35449055-35449312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               245, 134
               

               Conread position:
               78-363
               

               Cow position:
               chr5:29212750-29213032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 57
               

               Conread position:
               78-368
               

               Cow position:
               chr5:45409127-45409422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               78-377
               

               Cow position:
               chr5:57271463-57271188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               78-381
               

               Cow position:
               chr5:71494618-71494933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 157
               

               Conread position:
               78-386
               

               Cow position:
               chr5:48154671-48154348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               78-388
               

               Cow position:
               chr5:4280265-4280567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 66
               

               Conread position:
               78-389
               

               Cow position:
               chr5:9390337-9390677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               78-389
               

               Cow position:
               chr5:56518408-56518102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 184
               

               Conread position:
               78-390
               

               Cow position:
               chr5:6572553-6572865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               78-391
               

               Cow position:
               chr5:62142472-62142798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 140
               

               Conread position:
               78-449
               

               Cow position:
               chr5:47547915-47547547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               114, 13
               

               Conread position:
               79-381
               

               Cow position:
               chr5:69731320-69731612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 56
               

               Conread position:
               80-318
               

               Cow position:
               chr5:46499102-46499341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               106, 72
               

               Conread position:
               81-381
               

               Cow position:
               chr5:34561813-34562129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               84-329
               

               Cow position:
               chr5:44587486-44587230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 226
               

               Conread position:
               85-246
               

               Cow position:
               chr5:50870350-50870516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               85-291
               

               Cow position:
               chr5:74019962-74019754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               109, 16
               

               Conread position:
               85-321
               

               Cow position:
               chr5:7140296-7140060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 61
               

               Conread position:
               85-391
               

               Cow position:
               chr5:22643409-22643110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 120
               

               Conread position:
               85-400
               

               Cow position:
               chr5:3649652-3649333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               27, 184
               

               Conread position:
               86-298
               

               Cow position:
               chr5:17371891-17371681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               86-386
               

               Cow position:
               chr5:8163014-8162701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               86-389
               

               Cow position:
               chr5:5855689-5855978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               239, 54
               

               Conread position:
               86-391
               

               Cow position:
               chr5:4220790-4221100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 184
               

               Conread position:
               86-391
               

               Cow position:
               chr5:69461144-69461457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 149
               

               Conread position:
               87-289
               

               Cow position:
               chr5:52040509-52040302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               87-299
               

               Cow position:
               chr5:53146075-53145859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               59, 6
               

               Conread position:
               87-373
               

               Cow position:
               chr5:7755742-7755465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               238, 43
               

               Conread position:
               87-377
               

               Cow position:
               chr5:57591501-57591796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 128
               

               Conread position:
               87-391
               

               Cow position:
               chr5:48010036-48009737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 57
               

               Conread position:
               88-343
               

               Cow position:
               chr5:1678211-1678460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               102, 45
               

               Conread position:
               88-381
               

               Cow position:
               chr5:7044899-7044593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               90-271
               

               Cow position:
               chr5:39242376-39242202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               174, 49
               

               Conread position:
               90-313
               

               Cow position:
               chr5:17644842-17644616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               90-391
               

               Cow position:
               chr5:29061111-29060813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               61, 109
               

               Conread position:
               91-391
               

               Cow position:
               chr5:3639668-3639375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               93-318
               

               Cow position:
               chr5:63763278-63763509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 19
               

               Conread position:
               93-381
               

               Cow position:
               chr5:34624785-34625072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 100
               

               Conread position:
               93-390
               

               Cow position:
               chr5:37808848-37808542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 60
               

               Conread position:
               94-244
               

               Cow position:
               chr5:57576031-57576184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 31
               

               Conread position:
               94-379
               

               Cow position:
               chr5:17768326-17768039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 39
               

               Conread position:
               94-381
               

               Cow position:
               chr5:57575583-57575885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               94-385
               

               Cow position:
               chr5:47323268-47323578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 82
               

               Conread position:
               95-369
               

               Cow position:
               chr5:71722879-71723176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               95-381
               

               Cow position:
               chr5:54089856-54090147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 118
               

               Conread position:
               95-391
               

               Cow position:
               chr5:46512948-46512647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 169
               

               Conread position:
               97-379
               

               Cow position:
               chr5:36486306-36486603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 207
               

               Conread position:
               97-391
               

               Cow position:
               chr5:31923202-31923495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               175, 53
               

               Conread position:
               98-391
               

               Cow position:
               chr5:44028480-44028185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 113
               

               Conread position:
               98-447
               

               Cow position:
               chr5:3668719-3669087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               266
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               99-335
               

               Cow position:
               chr5:28957794-28957554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 143
               

               Conread position:
               100-317
               

               Cow position:
               chr5:42705088-42705303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               91, 128
               

               Conread position:
               100-389
               

               Cow position:
               chr5:51935006-51935309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 182
               

               Conread position:
               101-332
               

               Cow position:
               chr5:43816786-43816546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               101-369
               

               Cow position:
               chr5:69520715-69520991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               44, 126
               

               Conread position:
               101-381
               

               Cow position:
               chr5:62638730-62639016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 191
               

               Conread position:
               102-244
               

               Cow position:
               chr5:45026092-45025950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               89, 127
               

               Conread position:
               102-250
               

               Cow position:
               chr5:23208929-23208782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               102-323
               

               Cow position:
               chr5:52667853-52668076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               102-329
               

               Cow position:
               chr5:29980160-29979928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 96
               

               Conread position:
               103-377
               

               Cow position:
               chr5:1987443-1987723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               104-275
               

               Cow position:
               chr5:23913914-23914093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 162
               

               Conread position:
               104-386
               

               Cow position:
               chr5:59115208-59115499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               104-389
               

               Cow position:
               chr5:41452839-41452552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               105-381
               

               Cow position:
               chr5:30629330-30629044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 135
               

               Conread position:
               106-381
               

               Cow position:
               chr5:56014564-56014843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               150, 113
               

               Conread position:
               106-391
               

               Cow position:
               chr5:55955735-55956035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               107-254
               

               Cow position:
               chr5:61875347-61875206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               107-379
               

               Cow position:
               chr5:56317125-56317399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 113
               

               Conread position:
               107-385
               

               Cow position:
               chr5:12866998-12866712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               43, 242
               

               Conread position:
               109-381
               

               Cow position:
               chr5:1396458-1396712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               222, 27
               

               Conread position:
               110-259
               

               Cow position:
               chr5:24616289-24616132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               110-386
               

               Cow position:
               chr5:64697614-64697899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 70
               

               Conread position:
               110-391
               

               Cow position:
               chr5:30950086-30949793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 130
               

               Conread position:
               111-385
               

               Cow position:
               chr5:23529442-23529166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               111-389
               

               Cow position:
               chr5:65967897-65967611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               35, 126
               

               Conread position:
               112-364
               

               Cow position:
               chr5:11540208-11539955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               112-381
               

               Cow position:
               chr5:14629980-14629693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               113-295
               

               Cow position:
               chr5:64060457-64060274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 89
               

               Conread position:
               113-331
               

               Cow position:
               chr5:41486901-41486681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               5, 28
               

               Conread position:
               113-389
               

               Cow position:
               chr5:16214524-16214807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 59
               

               Conread position:
               113-391
               

               Cow position:
               chr5:54060110-54060398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 140
               

               Conread position:
               114-391
               

               Cow position:
               chr5:57768135-57767863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               80, 43
               

               Conread position:
               114-395
               

               Cow position:
               chr5:21920205-21920497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 256
               

               Conread position:
               115-388
               

               Cow position:
               chr5:66972267-66972548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 16
               

               Conread position:
               116-246
               

               Cow position:
               chr5:39872688-39872814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 93
               

               Conread position:
               116-317
               

               Cow position:
               chr5:71579013-71579218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               116-381
               

               Cow position:
               chr5:46426011-46425743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               158, 119
               

               Conread position:
               116-385
               

               Cow position:
               chr5:66581803-66582080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               73, 146
               

               Conread position:
               116-391
               

               Cow position:
               chr5:45397418-45397691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               152, 100
               

               Conread position:
               117-259
               

               Cow position:
               chr5:51919513-51919654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               120-385
               

               Cow position:
               chr5:65883932-65883656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               120-391
               

               Cow position:
               chr5:47696599-47696328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 112
               

               Conread position:
               121-335
               

               Cow position:
               chr5:55750407-55750204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               121-391
               

               Cow position:
               chr5:42050392-42050674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 118
               

               Conread position:
               121-395
               

               Cow position:
               chr5:67540359-67540075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               121-446
               

               Cow position:
               chr5:23866316-23865998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               252, 39
               

               Conread position:
               122-381
               

               Cow position:
               chr5:35247265-35246998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 96
               

               Conread position:
               123-300
               

               Cow position:
               chr5:44849876-44849706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               69, 30
               

               Conread position:
               126-381
               

               Cow position:
               chr5:12673610-12673366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               204, 34
               

               Conread position:
               126-385
               

               Cow position:
               chr5:35459445-35459177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               26, 65
               

               Conread position:
               126-388
               

               Cow position:
               chr5:7057550-7057283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               126-391
               

               Cow position:
               chr5:39874972-39875246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               127-372
               

               Cow position:
               chr5:12761265-12761015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               65, 135
               

               Conread position:
               129-329
               

               Cow position:
               chr5:51801117-51800918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               130-329
               

               Cow position:
               chr5:54154534-54154337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 127
               

               Conread position:
               131-233
               

               Cow position:
               chr5:54750691-54750794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               131-339
               

               Cow position:
               chr5:50972385-50972594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               131-348
               

               Cow position:
               chr5:39182056-39181839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               81, 99
               

               Conread position:
               131-379
               

               Cow position:
               chr5:20422324-20422083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               199, 29
               

               Conread position:
               131-386
               

               Cow position:
               chr5:63865650-63865911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               143, 247
               

               Conread position:
               131-391
               

               Cow position:
               chr5:70952021-70951767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               199, 135
               

               Conread position:
               133-388
               

               Cow position:
               chr5:18288985-18289241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 181
               

               Conread position:
               134-275
               

               Cow position:
               chr5:19294628-19294491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               135-371
               

               Cow position:
               chr5:48405319-48405075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               135-379
               

               Cow position:
               chr5:29097218-29097478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               135-381
               

               Cow position:
               chr5:44447008-44446753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               139, 7
               

               Conread position:
               135-381
               

               Cow position:
               chr5:57101917-57101669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               44, 94
               

               Conread position:
               135-391
               

               Cow position:
               chr5:29844138-29844402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               136-381
               

               Cow position:
               chr5:64592232-64591983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               140-372
               

               Cow position:
               chr5:36255396-36255154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               140-381
               

               Cow position:
               chr5:45574481-45574732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               132, 17
               

               Conread position:
               140-385
               

               Cow position:
               chr5:73168134-73167895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               141-314
               

               Cow position:
               chr5:38647224-38647394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               141-317
               

               Cow position:
               chr5:56334543-56334729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               142-379
               

               Cow position:
               chr5:14473551-14473294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               142-391
               

               Cow position:
               chr5:54768044-54767787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 161
               

               Conread position:
               143-371
               

               Cow position:
               chr5:45273634-45273399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               143-381
               

               Cow position:
               chr5:59717615-59717848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               192, 73
               

               Conread position:
               144-349
               

               Cow position:
               chr5:991334-991542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               181, 126
               

               Conread position:
               144-350
               

               Cow position:
               chr5:25447432-25447643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               144-367
               

               Cow position:
               chr5:69047494-69047274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               145-385
               

               Cow position:
               chr5:63427137-63426889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               145-388
               

               Cow position:
               chr5:33560865-33560615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               146-312
               

               Cow position:
               chr5:47721408-47721581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               146-370
               

               Cow position:
               chr5:44726456-44726233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               184, 122
               

               Conread position:
               147-300
               

               Cow position:
               chr5:41227113-41226962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               39, 114
               

               Conread position:
               148-391
               

               Cow position:
               chr5:49474670-49474423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               149-391
               

               Cow position:
               chr5:60747403-60747159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               150-327
               

               Cow position:
               chr5:64181701-64181524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 103
               

               Conread position:
               150-377
               

               Cow position:
               chr5:19335913-19335673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               150-379
               

               Cow position:
               chr5:56680121-56680366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               35, 138
               

               Conread position:
               153-371
               

               Cow position:
               chr5:3002795-3003010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 8
               

               Conread position:
               156-385
               

               Cow position:
               chr5:57419913-57419678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               157-381
               

               Cow position:
               chr5:49440991-49440759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               105, 73
               

               Conread position:
               157-391
               

               Cow position:
               chr5:16179644-16179389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 60
               

               Conread position:
               158-386
               

               Cow position:
               chr5:19523779-19524017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               159-388
               

               Cow position:
               chr5:53710811-53710570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               159-407
               

               Cow position:
               chr5:6891135-6890885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               104, 162
               

               Conread position:
               161-388
               

               Cow position:
               chr5:12901800-12902036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 107
               

               Conread position:
               162-361
               

               Cow position:
               chr5:64168356-64168147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               163-373
               

               Cow position:
               chr5:42670969-42670760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               160, 48
               

               Conread position:
               164-383
               

               Cow position:
               chr5:57561405-57561637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               164-391
               

               Cow position:
               chr5:7697893-7698122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 96
               

               Conread position:
               164-391
               

               Cow position:
               chr5:13717683-13717448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 146
               

               Conread position:
               164-391
               

               Cow position:
               chr5:47681114-47680896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               169, 35
               

               Conread position:
               164-391
               

               Cow position:
               chr5:58446691-58446929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               165-311
               

               Cow position:
               chr5:29895087-29895234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               104, 43
               

               Conread position:
               166-323
               

               Cow position:
               chr5:60448105-60448264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               166-391
               

               Cow position:
               chr5:23678814-23678581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 217
               

               Conread position:
               166-391
               

               Cow position:
               chr5:60183691-60183927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               167-379
               

               Cow position:
               chr5:35125945-35126165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               168-370
               

               Cow position:
               chr5:76119442-76119649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 156
               

               Conread position:
               169-370
               

               Cow position:
               chr5:43371305-43371094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 143
               

               Conread position:
               169-394
               

               Cow position:
               chr5:56635793-56636020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 68
               

               Conread position:
               172-315
               

               Cow position:
               chr5:56469930-56469782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               172-388
               

               Cow position:
               chr5:53946791-53947016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               172-390
               

               Cow position:
               chr5:12557396-12557166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               172-391
               

               Cow position:
               chr5:4927671-4927444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 198
               

               Conread position:
               172-391
               

               Cow position:
               chr5:54375611-54375380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               173-362
               

               Cow position:
               chr5:35785079-35784897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               173-391
               

               Cow position:
               chr5:36039107-36038879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               174-385
               

               Cow position:
               chr5:23357234-23357445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               54, 5
               

               Conread position:
               175-391
               

               Cow position:
               chr5:41293979-41294202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               16, 121
               

               Conread position:
               176-384
               

               Cow position:
               chr5:59384793-59384574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 131
               

               Conread position:
               176-391
               

               Cow position:
               chr5:62378691-62378902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               149, 84
               

               Conread position:
               178-389
               

               Cow position:
               chr5:55019195-55019412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               179-319
               

               Cow position:
               chr5:29860250-29860395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               179-381
               

               Cow position:
               chr5:30232802-30233019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 212
               

               Conread position:
               179-387
               

               Cow position:
               chr5:33833948-33834158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               152, 10
               

               Conread position:
               184-312
               

               Cow position:
               chr5:59257801-59257926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               184-370
               

               Cow position:
               chr5:34192810-34193007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               184-381
               

               Cow position:
               chr5:35976429-35976622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               140, 51
               

               Conread position:
               184-385
               

               Cow position:
               chr5:1087288-1087083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               144, 36
               

               Conread position:
               184-385
               

               Cow position:
               chr5:50575693-50575899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               147, 169
               

               Conread position:
               184-391
               

               Cow position:
               chr5:63234921-63234707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 139
               

               Conread position:
               188-391
               

               Cow position:
               chr5:55796051-55795844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               189-379
               

               Cow position:
               chr5:41884849-41885029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 81
               

               Conread position:
               189-385
               

               Cow position:
               chr5:57527005-57526813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               139, 80
               

               Conread position:
               190-391
               

               Cow position:
               chr5:1165088-1165288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 114
               

               Conread position:
               192-391
               

               Cow position:
               chr5:66551983-66551774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               195-337
               

               Cow position:
               chr5:34107155-34107298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               195-381
               

               Cow position:
               chr5:43402819-43403017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               196-388
               

               Cow position:
               chr5:61914490-61914683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               129, 74
               

               Conread position:
               197-392
               

               Cow position:
               chr5:19752226-19752425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               199-388
               

               Cow position:
               chr5:57756108-57755916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               200-385
               

               Cow position:
               chr5:30805092-30805280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               86, 49
               

               Conread position:
               205-388
               

               Cow position:
               chr5:28035669-28035862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-391
               

               Cow position:
               chr5:22445847-22446033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               212-391
               

               Cow position:
               chr5:59627038-59626850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               61, 184
               

               Conread position:
               212-439
               

               Cow position:
               chr5:1461023-1461273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               214-373
               

               Cow position:
               chr5:26150483-26150317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               215-391
               

               Cow position:
               chr5:45420195-45420015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               115, 55
               

               Conread position:
               217-391
               

               Cow position:
               chr5:63627584-63627413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               218-381
               

               Cow position:
               chr5:61455787-61455956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               223-385
               

               Cow position:
               chr5:57156367-57156196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 47
               

               Conread position:
               226-384
               

               Cow position:
               chr5:15470882-15471044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 72
               

               Conread position:
               230-433
               

               Cow position:
               chr5:56153568-56153777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               38, 178
               

               Conread position:
               237-391
               

               Cow position:
               chr5:49501864-49501702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               241-391
               

               Cow position:
               chr5:57101561-57101401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               243-391
               

               Cow position:
               chr5:33273657-33273815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               245-391
               

               Cow position:
               chr5:45574399-45574243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               249-391
               

               Cow position:
               chr5:61875515-61875659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               23, 48
               

               Conread position:
               270-387
               

               Cow position:
               chr5:57736697-57736581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               270-390
               

               Cow position:
               chr5:51490250-51490127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               270-391
               

               Cow position:
               chr5:4267665-4267792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               272-391
               

               Cow position:
               chr5:65679973-65679851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               296-452
               

               Cow position:
               chr5:30294972-30295129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 68
               
Show alignments to all cow chromosomes.
Conread position:	1-281
Cow position:	chr5:27690344-27690054 (view UCSC Genome Browser custom track)
Alignm length:	294
Alignm identity:	216
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	41, 205
Conread position:	1-364
Cow position:	chr5:5111358-5110979 (view UCSC Genome Browser custom track)
Alignm length:	382
Alignm identity:	289
Alignm E-value:	0
Alignm gaps (pig, cow):	46, 181
Conread position:	1-380
Cow position:	chr5:50722769-50723157 (view UCSC Genome Browser custom track)
Alignm length:	395
Alignm identity:	285
Alignm E-value:	0
Alignm gaps (pig, cow):	48, 110
Conread position:	1-388
Cow position:	chr5:15478827-15479244 (view UCSC Genome Browser custom track)
Alignm length:	421
Alignm identity:	314
Alignm E-value:	0
Alignm gaps (pig, cow):	48, 242
Conread position:	1-391
Cow position:	chr5:26990111-26990510 (view UCSC Genome Browser custom track)
Alignm length:	409
Alignm identity:	306
Alignm E-value:	0
Alignm gaps (pig, cow):	11, 162
Conread position:	2-307
Cow position:	chr5:49820862-49821172 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	238
Alignm E-value:	0
Alignm gaps (pig, cow):	44, 119
Conread position:	2-308
Cow position:	chr5:6130076-6130387 (view UCSC Genome Browser custom track)
Alignm length:	313
Alignm identity:	230
Alignm E-value:	0
Alignm gaps (pig, cow):	47, 68
Conread position:	2-321
Cow position:	chr5:4797593-4797277 (view UCSC Genome Browser custom track)
Alignm length:	329
Alignm identity:	242
Alignm E-value:	0
Alignm gaps (pig, cow):	41, 158
Conread position:	2-337
Cow position:	chr5:72287199-72286852 (view UCSC Genome Browser custom track)
Alignm length:	354
Alignm identity:	251
Alignm E-value:	3.00018e-42
Alignm gaps (pig, cow):	50, 160
Conread position:	2-344
Cow position:	chr5:32378592-32378916 (view UCSC Genome Browser custom track)
Alignm length:	350
Alignm identity:	255
Alignm E-value:	9.94922e-44
Alignm gaps (pig, cow):	49, 38
Conread position:	2-363
Cow position:	chr5:65593597-65593962 (view UCSC Genome Browser custom track)
Alignm length:	374
Alignm identity:	264
Alignm E-value:	0
Alignm gaps (pig, cow):	36, 69
Conread position:	2-381
Cow position:	chr5:41604330-41604735 (view UCSC Genome Browser custom track)
Alignm length:	408
Alignm identity:	284
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	39, 316
Conread position:	2-388
Cow position:	chr5:68604573-68604972 (view UCSC Genome Browser custom track)
Alignm length:	405
Alignm identity:	276
Alignm E-value:	9.94922e-44
Alignm gaps (pig, cow):	26, 270
Conread position:	2-390
Cow position:	chr5:24175091-24175496 (view UCSC Genome Browser custom track)
Alignm length:	416
Alignm identity:	297
Alignm E-value:	0
Alignm gaps (pig, cow):	38, 164
Conread position:	2-391
Cow position:	chr5:17027818-17028217 (view UCSC Genome Browser custom track)
Alignm length:	406
Alignm identity:	290
Alignm E-value:	0
Alignm gaps (pig, cow):	47, 151
Conread position:	2-393
Cow position:	chr5:58793895-58793483 (view UCSC Genome Browser custom track)
Alignm length:	416
Alignm identity:	326
Alignm E-value:	0
Alignm gaps (pig, cow):	40, 174
Conread position:	2-398
Cow position:	chr5:34183933-34184352 (view UCSC Genome Browser custom track)
Alignm length:	424
Alignm identity:	301
Alignm E-value:	0
Alignm gaps (pig, cow):	41, 289
Conread position:	2-445
Cow position:	chr5:42667672-42667199 (view UCSC Genome Browser custom track)
Alignm length:	481
Alignm identity:	336
Alignm E-value:	0
Alignm gaps (pig, cow):	47, 128
Conread position:	3-245
Cow position:	chr5:63917686-63917441 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	192
Alignm E-value:	0
Alignm gaps (pig, cow):	74, 38
Conread position:	3-253
Cow position:	chr5:8178903-8179160 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	176
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	46, 0