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Cow genome map

           
Conread name:
           
Pig2-92G10
        

               
Conread position:
               
1-267
               

               
Cow position:
               
chr9:20393792-20394056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr9:58439450-58439753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr9:42956679-42956485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
143, 41
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr9:3924953-3924664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr9:27076930-27077226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr9:54997690-54998015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 295
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr9:27697396-27697714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr9:1997464-1997140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr9:34918949-34919258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
2-329
               

               
Cow position:
               
chr9:33682010-33681675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr9:26391099-26390769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 191
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr9:5442324-5441965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
2-352
               

               
Cow position:
               
chr9:3388026-3387663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-358
               

               
Cow position:
               
chr9:25469350-25469017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr9:5319964-5319569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 223
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr9:44831722-44832105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 160
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr9:20989120-20989514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr9:3932300-3931905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 376
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr9:20038826-20039187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr9:32266060-32266444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr9:32677017-32676620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr9:34310369-34309972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 304
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr9:61997261-61997660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 256
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr9:28948188-28947801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 208
               

               
Conread position:
               
2-386
               

               
Cow position:
               
chr9:21030652-21030246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr9:3220454-3220069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr9:19903387-19903015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 124
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr9:20416176-20416573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr9:28983521-28983116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr9:62657127-62656736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr9:29808796-29808381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr9:9552420-9552014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 190
               

               
Conread position:
               
2-426
               

               
Cow position:
               
chr9:16300233-16300670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr9:7363370-7362917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 252
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr9:9461323-9461713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 285
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr9:5501183-5500796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr9:7410116-7409703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr9:63784592-63784978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr9:61739250-61738855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr9:62442615-62442223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
3-452
               

               
Cow position:
               
chr9:10308673-10309125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 162
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr9:33823424-33823201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr9:17785126-17785381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr9:3807407-3807664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr9:5141406-5141156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 120
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr9:19539430-19539166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr9:53608061-53608335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr9:36623120-36623392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr9:9491121-9490842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr9:16218313-16218606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr9:42998129-42998431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr9:32812679-32812371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 273
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr9:39971366-39971069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr9:25657858-25657525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 268
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr9:57950997-57951305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr9:59507404-59507104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr9:23028133-23027817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 147
               

               
Conread position:
               
4-321
               

               
Cow position:
               
chr9:59172046-59172371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr9:10092062-10092386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr9:54610899-54611234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
4-330
               

               
Cow position:
               
chr9:20810734-20811065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr9:18162819-18163165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 239
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr9:44921079-44921415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr9:1951937-1952293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr9:8997889-8997516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
4-369
               

               
Cow position:
               
chr9:15982749-15983117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr9:824288-823914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 130
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr9:37528789-37528426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 265
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr9:9723550-9723923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr9:22318671-22318302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr9:53257733-53258102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
186, 143
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr9:3379444-3379088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr9:648107-647724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr9:24726345-24726718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 157
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr9:5510057-5509669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 241
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr9:15805588-15805978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 208
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr9:6089436-6089033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr9:29184804-29185193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr9:34696963-34697355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 272
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr9:39681691-39681283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 111
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr9:46316455-46316837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr9:63746134-63745759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:4646001-4646382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:5218847-5219229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 151
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:5433964-5433575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 137
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:5763297-5763688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 228
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:8636990-8636610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
47, 164
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:8998688-8998292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:23388346-23388729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:28747192-28747577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:38344228-38343831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:38793352-38792958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 277
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr9:64092019-64091623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
4-382
               

               
Cow position:
               
chr9:28726393-28726783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
4-383
               

               
Cow position:
               
chr9:38961104-38961489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 143
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr9:8534353-8534751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 242
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr9:19714403-19714019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr9:25964491-25964895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr9:23269359-23268967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr9:14974594-14974983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr9:18215580-18215973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr9:22443282-22443691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr9:31077345-31077734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 265
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr9:37017217-37016835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 217
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr9:51566168-51566559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr9:64050227-64050625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 252
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr9:42498162-42497760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 307
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:4267660-4268049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:5594833-5594436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 239
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:9199452-9199846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:13169340-13169730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 147
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:17740612-17741008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 251
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:28773450-28773072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:31347286-31346883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 190
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:33093277-33092892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:33218619-33219016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:41680066-41679680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:42445640-42446050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:45141294-45141667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 35
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:50080713-50081107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 263
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:56031996-56032382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr9:61022942-61022556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
4-452
               

               
Cow position:
               
chr9:35375754-35375286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 163
               

               
Conread position:
               
5-368
               

               
Cow position:
               
chr9:48106785-48107160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr9:47905948-47906333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr9:5246177-5245786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr9:21459823-21460218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 195
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr9:31124592-31124910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr9:3724731-3725064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr9:50606622-50606989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 144
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr9:35904420-35904792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr9:53412919-53413293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr9:62357197-62357585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr9:52484590-52484976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr9:789114-788757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 37
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr9:6933741-6934138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr9:13205239-13205633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr9:44467018-44467406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 253
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr9:54528846-54528447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 182
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr9:26057121-26057498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr9:34957722-34958123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 228
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr9:36445950-36445553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr9:43871301-43870908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
10-381
               

               
Cow position:
               
chr9:29006887-29006500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
10-382
               

               
Cow position:
               
chr9:52407497-52407106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 381
               

               
Conread position:
               
10-391
               

               
Cow position:
               
chr9:64155529-64155918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 250
               

               
Conread position:
               
11-381
               

               
Cow position:
               
chr9:22151762-22152142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 154
               

               
Conread position:
               
11-386
               

               
Cow position:
               
chr9:7866391-7866012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
38, 255
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr9:22616943-22616721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
13-259
               

               
Cow position:
               
chr9:41416674-41416423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
13-308
               

               
Cow position:
               
chr9:49279775-49279486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
13-311
               

               
Cow position:
               
chr9:22227761-22228060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
13-315
               

               
Cow position:
               
chr9:19542232-19541920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
13-317
               

               
Cow position:
               
chr9:53602733-53602440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
13-347
               

               
Cow position:
               
chr9:22361337-22360989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 189
               

               
Conread position:
               
13-357
               

               
Cow position:
               
chr9:23527478-23527817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr9:4928949-4928598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
13-372
               

               
Cow position:
               
chr9:10118342-10118707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
13-372
               

               
Cow position:
               
chr9:14796459-14796818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
13-377
               

               
Cow position:
               
chr9:20681085-20681459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
13-380
               

               
Cow position:
               
chr9:26404113-26403729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
13-380
               

               
Cow position:
               
chr9:56773403-56773020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr9:11299373-11299737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr9:35167495-35167119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr9:55796075-55795702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
13-386
               

               
Cow position:
               
chr9:52504980-52505368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 260
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr9:17410865-17411257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr9:30402096-30402490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
13-389
               

               
Cow position:
               
chr9:1950246-1949852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr9:1520405-1520807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr9:6192138-6192527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
13-393
               

               
Cow position:
               
chr9:13221572-13221960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
13-393
               

               
Cow position:
               
chr9:55651348-55650967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
14-260
               

               
Cow position:
               
chr9:48343921-48343672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
14-349
               

               
Cow position:
               
chr9:3411091-3410759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
14-381
               

               
Cow position:
               
chr9:5226842-5227229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 290
               

               
Conread position:
               
14-381
               

               
Cow position:
               
chr9:5393373-5393012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 188
               

               
Conread position:
               
14-391
               

               
Cow position:
               
chr9:6880091-6879712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 205
               

               
Conread position:
               
14-391
               

               
Cow position:
               
chr9:18381183-18380798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 202
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr9:42585304-42585561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr9:44821984-44822237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
15-331
               

               
Cow position:
               
chr9:52724896-52725218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
15-381
               

               
Cow position:
               
chr9:20848258-20847878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 350
               

               
Conread position:
               
15-381
               

               
Cow position:
               
chr9:39428493-39428856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
15-389
               

               
Cow position:
               
chr9:9443270-9443666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
15-390
               

               
Cow position:
               
chr9:5327567-5327192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
15-390
               

               
Cow position:
               
chr9:34287111-34286733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
15-391
               

               
Cow position:
               
chr9:55074813-55075195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
16-310
               

               
Cow position:
               
chr9:18002631-18002934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
16-314
               

               
Cow position:
               
chr9:34000291-34000604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
16-385
               

               
Cow position:
               
chr9:5161753-5162111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
16-389
               

               
Cow position:
               
chr9:59386459-59386834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 127
               

               
Conread position:
               
16-390
               

               
Cow position:
               
chr9:9516450-9516819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
16-391
               

               
Cow position:
               
chr9:21888490-21888103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 276
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr9:30664458-30664747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 194
               

               
Conread position:
               
17-383
               

               
Cow position:
               
chr9:22114312-22114694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
19-357
               

               
Cow position:
               
chr9:23264072-23263742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
19-388
               

               
Cow position:
               
chr9:50976928-50977317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 186
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr9:20739020-20738708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
21-377
               

               
Cow position:
               
chr9:26344669-26345021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
21-381
               

               
Cow position:
               
chr9:7634584-7634214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
21-385
               

               
Cow position:
               
chr9:45756672-45756302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
21-389
               

               
Cow position:
               
chr9:54681817-54681444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
21-391
               

               
Cow position:
               
chr9:31078763-31079147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
22-381
               

               
Cow position:
               
chr9:55256235-55256609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr9:1350134-1350353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
25-348
               

               
Cow position:
               
chr9:25958724-25958395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
25-373
               

               
Cow position:
               
chr9:36490583-36490950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
27-380
               

               
Cow position:
               
chr9:20321803-20322149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chr9:20318769-20319008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
31-385
               

               
Cow position:
               
chr9:10011108-10010754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
35-391
               

               
Cow position:
               
chr9:34689311-34689664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr9:34468296-34468632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
40-261
               

               
Cow position:
               
chr9:45170874-45171097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
40-334
               

               
Cow position:
               
chr9:38692243-38692539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 177
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr9:20091333-20090989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr9:41958500-41958843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 217
               

               
Conread position:
               
40-389
               

               
Cow position:
               
chr9:8338325-8337962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 169
               

               
Conread position:
               
41-236
               

               
Cow position:
               
chr9:35101161-35100962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
41-381
               

               
Cow position:
               
chr9:5836458-5836092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
41-381
               

               
Cow position:
               
chr9:29825323-29824973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 30
               

               
Conread position:
               
41-391
               

               
Cow position:
               
chr9:40542407-40542069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
41-391
               

               
Cow position:
               
chr9:55321939-55321570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
44-207
               

               
Cow position:
               
chr9:34400329-34400158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr9:26310849-26310656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
44-291
               

               
Cow position:
               
chr9:1984231-1984485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
44-317
               

               
Cow position:
               
chr9:64516806-64517088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
44-323
               

               
Cow position:
               
chr9:29034745-29035029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
44-331
               

               
Cow position:
               
chr9:20900840-20901124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
44-349
               

               
Cow position:
               
chr9:35533661-35533976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
44-361
               

               
Cow position:
               
chr9:35850189-35849867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 195
               

               
Conread position:
               
44-377
               

               
Cow position:
               
chr9:36410061-36410401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 304
               

               
Conread position:
               
44-381
               

               
Cow position:
               
chr9:35708331-35708675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
44-384
               

               
Cow position:
               
chr9:60110525-60110190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
44-388
               

               
Cow position:
               
chr9:15215390-15215751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
44-388
               

               
Cow position:
               
chr9:22696507-22696159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
44-388
               

               
Cow position:
               
chr9:30138416-30138057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
44-388
               

               
Cow position:
               
chr9:50076356-50076000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 233
               

               
Conread position:
               
44-389
               

               
Cow position:
               
chr9:32306949-32307296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 227
               

               
Conread position:
               
44-389
               

               
Cow position:
               
chr9:58133733-58134068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 184
               

               
Conread position:
               
44-391
               

               
Cow position:
               
chr9:32371469-32371818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 217
               

               
Conread position:
               
44-391
               

               
Cow position:
               
chr9:55084006-55084368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
45-276
               

               
Cow position:
               
chr9:27052043-27052284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
45-276
               

               
Cow position:
               
chr9:29330368-29330587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
45-300
               

               
Cow position:
               
chr9:49404044-49403789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
45-329
               

               
Cow position:
               
chr9:8951192-8950905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
45-338
               

               
Cow position:
               
chr9:44408322-44408034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
168, 26
               

               
Conread position:
               
45-349
               

               
Cow position:
               
chr9:9416117-9416418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr9:52578243-52578592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr9:19382610-19382274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr9:56453622-56453281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
45-386
               

               
Cow position:
               
chr9:58674031-58673689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
45-389
               

               
Cow position:
               
chr9:4861679-4861319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
45-390
               

               
Cow position:
               
chr9:49764946-49764592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr9:9405765-9406120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 100
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr9:20579336-20579661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 36
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr9:26278887-26279236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 150
               

               
Conread position:
               
45-391
               

               
Cow position:
               
chr9:49689227-49688896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
45-392
               

               
Cow position:
               
chr9:30477510-30477842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 36
               

               
Conread position:
               
47-370
               

               
Cow position:
               
chr9:17634543-17634869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 184
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr9:3070135-3070467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
47-380
               

               
Cow position:
               
chr9:44710109-44709773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr9:11201867-11201523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr9:17871820-17872177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr9:33940895-33940538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr9:54716338-54716669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 44
               

               
Conread position:
               
48-259
               

               
Cow position:
               
chr9:18072831-18073041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
48-325
               

               
Cow position:
               
chr9:50544346-50544624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
48-381
               

               
Cow position:
               
chr9:9823232-9823563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
48-389
               

               
Cow position:
               
chr9:4630389-4630039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
48-389
               

               
Cow position:
               
chr9:8288904-8288553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
48-391
               

               
Cow position:
               
chr9:13670924-13670566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 183
               

               
Conread position:
               
49-325
               

               
Cow position:
               
chr9:36067191-36066909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
49-371
               

               
Cow position:
               
chr9:25546919-25546593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
49-380
               

               
Cow position:
               
chr9:9624742-9625066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 187
               

               
Conread position:
               
49-380
               

               
Cow position:
               
chr9:41513905-41513576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
49-381
               

               
Cow position:
               
chr9:59013049-59013396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 85
               

               
Conread position:
               
49-390
               

               
Cow position:
               
chr9:59794994-59795353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
49-391
               

               
Cow position:
               
chr9:10144186-10144542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 279
               

               
Conread position:
               
49-391
               

               
Cow position:
               
chr9:11319358-11319701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
49-391
               

               
Cow position:
               
chr9:58972194-58972561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 207
               

               
Conread position:
               
50-307
               

               
Cow position:
               
chr9:31626434-31626171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr9:51205006-51204670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 222
               

               
Conread position:
               
50-390
               

               
Cow position:
               
chr9:10666740-10667089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
50-391
               

               
Cow position:
               
chr9:52001291-52000952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
51-287
               

               
Cow position:
               
chr9:61846866-61847109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
51-334
               

               
Cow position:
               
chr9:54437536-54437260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
51-381
               

               
Cow position:
               
chr9:44914812-44915154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
51-388
               

               
Cow position:
               
chr9:17310278-17310626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
51-400
               

               
Cow position:
               
chr9:24997232-24997590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr9:35305837-35306095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
52-389
               

               
Cow position:
               
chr9:26086350-26085993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 195
               

               
Conread position:
               
53-250
               

               
Cow position:
               
chr9:10877584-10877791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
53-365
               

               
Cow position:
               
chr9:41789556-41789243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 43
               

               
Conread position:
               
53-389
               

               
Cow position:
               
chr9:29684427-29684079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
53-389
               

               
Cow position:
               
chr9:41283310-41282950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
54-321
               

               
Cow position:
               
chr9:1712207-1712467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
54-335
               

               
Cow position:
               
chr9:5532233-5531937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
54-389
               

               
Cow position:
               
chr9:1751616-1751273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 153
               

               
Conread position:
               
54-389
               

               
Cow position:
               
chr9:37069288-37069624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 210
               

               
Conread position:
               
54-391
               

               
Cow position:
               
chr9:5756722-5757055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 138
               

               
Conread position:
               
55-381
               

               
Cow position:
               
chr9:17929053-17928700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
55-391
               

               
Cow position:
               
chr9:24887477-24887139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
55-391
               

               
Cow position:
               
chr9:55287611-55287956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 184
               

               
Conread position:
               
55-391
               

               
Cow position:
               
chr9:58204943-58204606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 142
               

               
Conread position:
               
56-328
               

               
Cow position:
               
chr9:30749306-30749587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 237
               

               
Conread position:
               
56-381
               

               
Cow position:
               
chr9:44108551-44108890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
57-381
               

               
Cow position:
               
chr9:9402907-9403236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
57-381
               

               
Cow position:
               
chr9:34374652-34374981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
57-385
               

               
Cow position:
               
chr9:5209857-5209519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
58-328
               

               
Cow position:
               
chr9:4128506-4128779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 207
               

               
Conread position:
               
59-335
               

               
Cow position:
               
chr9:48118427-48118695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr9:64559610-64559943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
60-210
               

               
Cow position:
               
chr9:20465438-20465596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
60-225
               

               
Cow position:
               
chr9:18419438-18419274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
60-328
               

               
Cow position:
               
chr9:40105751-40105469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 221
               

               
Conread position:
               
60-334
               

               
Cow position:
               
chr9:9573607-9573326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 265
               

               
Conread position:
               
60-377
               

               
Cow position:
               
chr9:38614694-38615015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
61-391
               

               
Cow position:
               
chr9:32732411-32732746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
62-373
               

               
Cow position:
               
chr9:51620708-51620396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
63-391
               

               
Cow position:
               
chr9:23043047-23042711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
63-391
               

               
Cow position:
               
chr9:47869278-47868949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
68-381
               

               
Cow position:
               
chr9:64106170-64105842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
69-375
               

               
Cow position:
               
chr9:58979662-58979350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
70-334
               

               
Cow position:
               
chr9:34911422-34911156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
70-381
               

               
Cow position:
               
chr9:15006490-15006806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
71-354
               

               
Cow position:
               
chr9:6225191-6225482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 279
               

               
Conread position:
               
71-388
               

               
Cow position:
               
chr9:9753134-9753455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
71-389
               

               
Cow position:
               
chr9:34901854-34902166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
71-391
               

               
Cow position:
               
chr9:33598242-33597919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 191
               

               
Conread position:
               
73-300
               

               
Cow position:
               
chr9:16182232-16182457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
73-391
               

               
Cow position:
               
chr9:8563099-8562755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
76-389
               

               
Cow position:
               
chr9:18216846-18217164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 5
               

               
Conread position:
               
77-247
               

               
Cow position:
               
chr9:37141482-37141315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
108, 79
               

               
Conread position:
               
77-378
               

               
Cow position:
               
chr9:23541164-23541445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 62
               

               
Conread position:
               
78-259
               

               
Cow position:
               
chr9:8546571-8546392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
78-260
               

               
Cow position:
               
chr9:38875321-38875506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
78-280
               

               
Cow position:
               
chr9:41653042-41652836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
78-337
               

               
Cow position:
               
chr9:29108790-29108529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
134, 33
               

               
Conread position:
               
78-370
               

               
Cow position:
               
chr9:43207126-43207420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
78-372
               

               
Cow position:
               
chr9:11068216-11068519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 132
               

               
Conread position:
               
78-378
               

               
Cow position:
               
chr9:11192915-11193230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr9:8724049-8723739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 88
               

               
Conread position:
               
78-381
               

               
Cow position:
               
chr9:9595701-9596009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 183
               

               
Conread position:
               
78-381
               

               
Cow position:
               
chr9:25922076-25921766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
78-389
               

               
Cow position:
               
chr9:39577987-39577674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
78-389
               

               
Cow position:
               
chr9:55890062-55889749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr9:31814125-31814453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 104
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr9:38846096-38846400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 72
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr9:55118331-55118020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
78-393
               

               
Cow position:
               
chr9:3782616-3782301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
78-451
               

               
Cow position:
               
chr9:41995967-41995576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 210
               

               
Conread position:
               
80-391
               

               
Cow position:
               
chr9:50139532-50139218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
81-349
               

               
Cow position:
               
chr9:28735728-28735465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
105, 120
               

               
Conread position:
               
83-314
               

               
Cow position:
               
chr9:51005135-51004910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
85-377
               

               
Cow position:
               
chr9:61493273-61492979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 181
               

               
Conread position:
               
86-367
               

               
Cow position:
               
chr9:52131263-52130965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
86-381
               

               
Cow position:
               
chr9:33119637-33119945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 208
               

               
Conread position:
               
86-388
               

               
Cow position:
               
chr9:388770-389079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
86-388
               

               
Cow position:
               
chr9:61544894-61544597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
86-400
               

               
Cow position:
               
chr9:43757768-43757461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
188, 67
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr9:29092048-29091799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
87-376
               

               
Cow position:
               
chr9:766906-767203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
54, 177
               

               
Conread position:
               
87-377
               

               
Cow position:
               
chr9:32815882-32815599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
87-381
               

               
Cow position:
               
chr9:49710088-49709790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 155
               

               
Conread position:
               
87-388
               

               
Cow position:
               
chr9:1729432-1729738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
88-318
               

               
Cow position:
               
chr9:40604193-40603957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 190
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr9:6840254-6839929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
88-389
               

               
Cow position:
               
chr9:64637788-64637487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
90-391
               

               
Cow position:
               
chr9:56011738-56011432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
93-305
               

               
Cow position:
               
chr9:5238634-5238421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
93-417
               

               
Cow position:
               
chr9:62134382-62134714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
94-335
               

               
Cow position:
               
chr9:50702875-50703116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
95-385
               

               
Cow position:
               
chr9:3186378-3186065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
96-389
               

               
Cow position:
               
chr9:15225055-15225361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 182
               

               
Conread position:
               
96-390
               

               
Cow position:
               
chr9:30124157-30123863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 146
               

               
Conread position:
               
99-281
               

               
Cow position:
               
chr9:31292920-31292738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
99-381
               

               
Cow position:
               
chr9:11313275-11313567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
99-386
               

               
Cow position:
               
chr9:43623492-43623206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
99-389
               

               
Cow position:
               
chr9:4580188-4580469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
220, 57
               

               
Conread position:
               
100-327
               

               
Cow position:
               
chr9:32711163-32710932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
100-338
               

               
Cow position:
               
chr9:33038227-33038473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
100-372
               

               
Cow position:
               
chr9:62724777-62724487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
101-334
               

               
Cow position:
               
chr9:35128724-35128484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
101-386
               

               
Cow position:
               
chr9:6339032-6338731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
102-313
               

               
Cow position:
               
chr9:50667653-50667438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
103-301
               

               
Cow position:
               
chr9:40612606-40612412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
103-391
               

               
Cow position:
               
chr9:48628260-48627961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
104-314
               

               
Cow position:
               
chr9:1532105-1532311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
104-373
               

               
Cow position:
               
chr9:53211270-53211540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
104-391
               

               
Cow position:
               
chr9:53762928-53762627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
105-315
               

               
Cow position:
               
chr9:58734601-58734383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
105-358
               

               
Cow position:
               
chr9:3371805-3371535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 187
               

               
Conread position:
               
105-359
               

               
Cow position:
               
chr9:8317236-8317482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
105-388
               

               
Cow position:
               
chr9:27279544-27279245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
107-317
               

               
Cow position:
               
chr9:6117923-6118136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
109-381
               

               
Cow position:
               
chr9:11364115-11363840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
109-388
               

               
Cow position:
               
chr9:11123270-11123547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
110-357
               

               
Cow position:
               
chr9:30162384-30162123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
110-370
               

               
Cow position:
               
chr9:43048405-43048659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 153
               

               
Conread position:
               
110-384
               

               
Cow position:
               
chr9:1973163-1972888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 207
               

               
Conread position:
               
110-388
               

               
Cow position:
               
chr9:30652489-30652773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
110-388
               

               
Cow position:
               
chr9:42264442-42264149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 171
               

               
Conread position:
               
110-389
               

               
Cow position:
               
chr9:28354739-28354452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 125
               

               
Conread position:
               
111-317
               

               
Cow position:
               
chr9:1879596-1879393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 135
               

               
Conread position:
               
111-368
               

               
Cow position:
               
chr9:17799850-17799581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
111-370
               

               
Cow position:
               
chr9:26440576-26440858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
111-386
               

               
Cow position:
               
chr9:44833745-44834025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
112-310
               

               
Cow position:
               
chr9:1909167-1909361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
115-322
               

               
Cow position:
               
chr9:30195429-30195222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
115-388
               

               
Cow position:
               
chr9:16811443-16811718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
115-391
               

               
Cow position:
               
chr9:43444011-43443737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
116-381
               

               
Cow position:
               
chr9:19493244-19493523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
116-389
               

               
Cow position:
               
chr9:42478260-42478547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
117-294
               

               
Cow position:
               
chr9:29578458-29578282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
118-384
               

               
Cow position:
               
chr9:28391818-28392085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
119-268
               

               
Cow position:
               
chr9:20704944-20704799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
121-368
               

               
Cow position:
               
chr9:52637946-52638211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
121-386
               

               
Cow position:
               
chr9:4512701-4512426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
121-386
               

               
Cow position:
               
chr9:17676911-17677172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
121-391
               

               
Cow position:
               
chr9:49417197-49416920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
122-307
               

               
Cow position:
               
chr9:11198134-11198320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
122-369
               

               
Cow position:
               
chr9:8920207-8919955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 220
               

               
Conread position:
               
122-380
               

               
Cow position:
               
chr9:33237601-33237339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
123-385
               

               
Cow position:
               
chr9:62668464-62668187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
124-381
               

               
Cow position:
               
chr9:9815625-9815356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
125-317
               

               
Cow position:
               
chr9:3847874-3847681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
128-313
               

               
Cow position:
               
chr9:14358365-14358180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
129-391
               

               
Cow position:
               
chr9:47500001-47500278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 275
               

               
Conread position:
               
130-391
               

               
Cow position:
               
chr9:4340969-4341226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
195, 130
               

               
Conread position:
               
130-391
               

               
Cow position:
               
chr9:61303204-61302933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
131-388
               

               
Cow position:
               
chr9:10650105-10650363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
131-388
               

               
Cow position:
               
chr9:37678087-37677830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
132-389
               

               
Cow position:
               
chr9:50543221-50543493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
134-381
               

               
Cow position:
               
chr9:60027392-60027140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
135-380
               

               
Cow position:
               
chr9:32019134-32019380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 177
               

               
Conread position:
               
136-391
               

               
Cow position:
               
chr9:32115418-32115666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
192, 21
               

               
Conread position:
               
138-377
               

               
Cow position:
               
chr9:43875528-43875772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
138-391
               

               
Cow position:
               
chr9:19555567-19555309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 114
               

               
Conread position:
               
139-364
               

               
Cow position:
               
chr9:1371124-1370888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr9:40543131-40543368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
140-381
               

               
Cow position:
               
chr9:24873019-24872779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
140-391
               

               
Cow position:
               
chr9:19067968-19067717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
140-391
               

               
Cow position:
               
chr9:41728446-41728193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
136, 13
               

               
Conread position:
               
142-391
               

               
Cow position:
               
chr9:12910216-12910468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
143-391
               

               
Cow position:
               
chr9:56065736-56065497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 60
               

               
Conread position:
               
143-400
               

               
Cow position:
               
chr9:34106910-34106640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 124
               

               
Conread position:
               
144-339
               

               
Cow position:
               
chr9:62151288-62151098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr9:16121355-16121131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr9:8525021-8524802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
144-388
               

               
Cow position:
               
chr9:25584007-25583766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 51
               

               
Conread position:
               
145-322
               

               
Cow position:
               
chr9:31638455-31638635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
145-391
               

               
Cow position:
               
chr9:9654126-9654374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 146
               

               
Conread position:
               
147-361
               

               
Cow position:
               
chr9:41518434-41518663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
149-385
               

               
Cow position:
               
chr9:8901042-8901288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
150-391
               

               
Cow position:
               
chr9:11168911-11168663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
153-380
               

               
Cow position:
               
chr9:47445849-47446072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
153-391
               

               
Cow position:
               
chr9:40215421-40215180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
156-317
               

               
Cow position:
               
chr9:4323983-4324144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
157-389
               

               
Cow position:
               
chr9:12225808-12226042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
157-391
               

               
Cow position:
               
chr9:17518315-17518556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
157-391
               

               
Cow position:
               
chr9:25557139-25556905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
106, 63
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr9:27029531-27029751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
158-403
               

               
Cow position:
               
chr9:41957977-41957730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
160-385
               

               
Cow position:
               
chr9:26477387-26477155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr9:6851897-6852141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
161-386
               

               
Cow position:
               
chr9:44680457-44680674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
161-388
               

               
Cow position:
               
chr9:19034510-19034293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
161-418
               

               
Cow position:
               
chr9:50202739-50202476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
170, 87
               

               
Conread position:
               
162-377
               

               
Cow position:
               
chr9:1755973-1756198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
164-379
               

               
Cow position:
               
chr9:12281136-12280916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
164-390
               

               
Cow position:
               
chr9:51720735-51720963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
164-391
               

               
Cow position:
               
chr9:5263667-5263433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
165-381
               

               
Cow position:
               
chr9:43937105-43936888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
160, 93
               

               
Conread position:
               
165-385
               

               
Cow position:
               
chr9:5456008-5456236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
166-313
               

               
Cow position:
               
chr9:18029229-18029386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
166-381
               

               
Cow position:
               
chr9:49292981-49293200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
159, 90
               

               
Conread position:
               
167-328
               

               
Cow position:
               
chr9:31270943-31270782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
169-391
               

               
Cow position:
               
chr9:36843949-36843726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
171-373
               

               
Cow position:
               
chr9:33697186-33696983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
172-381
               

               
Cow position:
               
chr9:58670886-58670685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
172-390
               

               
Cow position:
               
chr9:11303919-11304141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr9:52267599-52267808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
173-391
               

               
Cow position:
               
chr9:6596078-6596297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
175-389
               

               
Cow position:
               
chr9:33114501-33114281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
178-391
               

               
Cow position:
               
chr9:39011324-39011536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
147, 53
               

               
Conread position:
               
180-381
               

               
Cow position:
               
chr9:41394504-41394704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 44
               

               
Conread position:
               
180-393
               

               
Cow position:
               
chr9:63896686-63896472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
182-321
               

               
Cow position:
               
chr9:11377793-11377935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
182-388
               

               
Cow position:
               
chr9:32669799-32670011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 91
               

               
Conread position:
               
183-391
               

               
Cow position:
               
chr9:51557351-51557553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 35
               

               
Conread position:
               
183-391
               

               
Cow position:
               
chr9:52839739-52839947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
146, 87
               

               
Conread position:
               
184-312
               

               
Cow position:
               
chr9:5069210-5069086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
184-326
               

               
Cow position:
               
chr9:9090218-9090361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
184-381
               

               
Cow position:
               
chr9:28686538-28686331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
184-386
               

               
Cow position:
               
chr9:48730574-48730369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
184-388
               

               
Cow position:
               
chr9:3774308-3774101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
184-388
               

               
Cow position:
               
chr9:26310649-26310442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
184-391
               

               
Cow position:
               
chr9:4262946-4263156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
184-391
               

               
Cow position:
               
chr9:34284094-34283886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
104, 61
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr9:35105645-35105851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
185-389
               

               
Cow position:
               
chr9:2977008-2976822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
186-380
               

               
Cow position:
               
chr9:38289180-38289378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
186-389
               

               
Cow position:
               
chr9:1867594-1867386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
137, 113
               

               
Conread position:
               
189-373
               

               
Cow position:
               
chr9:60081047-60080853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
189-391
               

               
Cow position:
               
chr9:5399279-5399068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
189-391
               

               
Cow position:
               
chr9:10819691-10819895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
189-395
               

               
Cow position:
               
chr9:54178291-54178491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 81
               

               
Conread position:
               
190-390
               

               
Cow position:
               
chr9:41486100-41486308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
190-391
               

               
Cow position:
               
chr9:11969328-11969120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 95
               

               
Conread position:
               
192-360
               

               
Cow position:
               
chr9:43013862-43013686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
194-388
               

               
Cow position:
               
chr9:44396796-44396598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
195-381
               

               
Cow position:
               
chr9:53326615-53326808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
195-385
               

               
Cow position:
               
chr9:40005611-40005413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
195-388
               

               
Cow position:
               
chr9:13743797-13743994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
195-389
               

               
Cow position:
               
chr9:31359736-31359539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
196-390
               

               
Cow position:
               
chr9:55532949-55532748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 48
               

               
Conread position:
               
196-391
               

               
Cow position:
               
chr9:52513318-52513515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
197-315
               

               
Cow position:
               
chr9:1850981-1851099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
198-393
               

               
Cow position:
               
chr9:5899829-5900029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
199-380
               

               
Cow position:
               
chr9:34410264-34410452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
201-389
               

               
Cow position:
               
chr9:1877878-1878067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 88
               

               
Conread position:
               
203-391
               

               
Cow position:
               
chr9:29339197-29339380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
206-390
               

               
Cow position:
               
chr9:3353475-3353296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
210-385
               

               
Cow position:
               
chr9:9311980-9311797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
212-389
               

               
Cow position:
               
chr9:3343861-3343684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
212-389
               

               
Cow position:
               
chr9:52598605-52598786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
214-382
               

               
Cow position:
               
chr9:54493254-54493077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
214-388
               

               
Cow position:
               
chr9:38941315-38941496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
214-391
               

               
Cow position:
               
chr9:21080679-21080496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
215-391
               

               
Cow position:
               
chr9:38645227-38645411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
216-390
               

               
Cow position:
               
chr9:50310659-50310826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
216-391
               

               
Cow position:
               
chr9:64064246-64064430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
217-381
               

               
Cow position:
               
chr9:23955870-23956037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
217-381
               

               
Cow position:
               
chr9:46664935-46664771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
217-385
               

               
Cow position:
               
chr9:22461627-22461792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr9:45171106-45171280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
223-391
               

               
Cow position:
               
chr9:40776905-40776731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
229-391
               

               
Cow position:
               
chr9:25400095-25400265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
229-391
               

               
Cow position:
               
chr9:41781755-41781587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
231-390
               

               
Cow position:
               
chr9:9460075-9459918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
234-373
               

               
Cow position:
               
chr9:23797333-23797187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
235-389
               

               
Cow position:
               
chr9:43342425-43342266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
235-391
               

               
Cow position:
               
chr9:8834034-8834194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
238-382
               

               
Cow position:
               
chr9:21383860-21384006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
238-390
               

               
Cow position:
               
chr9:9503172-9503023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
238-391
               

               
Cow position:
               
chr9:5342159-5342314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
241-391
               

               
Cow position:
               
chr9:44770108-44770259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
247-389
               

               
Cow position:
               
chr9:7805879-7806026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
270-391
               

               
Cow position:
               
chr9:52258007-52258129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
272-389
               

               
Cow position:
               
chr9:26859406-26859290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
272-389
               

               
Cow position:
               
chr9:47214487-47214610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
272-390
               

               
Cow position:
               
chr9:33347432-33347556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
273-391
               

               
Cow position:
               
chr9:24652461-24652337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
282-419
               

               
Cow position:
               
chr9:34014201-34014345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
284-391
               

               
Cow position:
               
chr9:60355166-60355279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.