Cow genome map

Conread name: Pig3-SRG8001B15

Conread position: 363-615
Cow position: chr10:15868118-15868376 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 56, 0

Conread position: 366-655
Cow position: chr10:10148525-10148828 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 49

Conread position: 371-569
Cow position: chr10:11463789-11463592 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 59

Conread position: 371-655
Cow position: chr10:2613243-2613544 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 68

Conread position: 372-569
Cow position: chr10:47412227-47412031 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 73

Conread position: 372-572
Cow position: chr10:22321402-22321601 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 73

Conread position: 372-586
Cow position: chr10:49169175-49168940 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 372-599
Cow position: chr10:24375430-24375651 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 55

Conread position: 372-603
Cow position: chr10:19549609-19549377 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 70, 47

Conread position: 372-648
Cow position: chr10:50533992-50533707 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 71

Conread position: 372-652
Cow position: chr10:10120076-10120362 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 40

Conread position: 372-652
Cow position: chr10:47773607-47773895 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 140

Conread position: 372-653
Cow position: chr10:24313008-24312716 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 41

Conread position: 372-673
Cow position: chr10:9675580-9675282 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 60

Conread position: 382-572
Cow position: chr10:11221593-11221781 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 59

Conread position: 382-582
Cow position: chr10:33732980-33732782 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 70

Conread position: 382-588
Cow position: chr10:42312791-42313000 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 45

Conread position: 382-599
Cow position: chr10:31779383-31779161 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 382-599
Cow position: chr10:61839483-61839690 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 49

Conread position: 382-600
Cow position: chr10:52113783-52113565 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 49

Conread position: 382-608
Cow position: chr10:52881732-52881502 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 32, 45

Conread position: 382-613
Cow position: chr10:47724839-47725061 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 31

Conread position: 382-614
Cow position: chr10:13311619-13311850 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 61

Conread position: 382-648
Cow position: chr10:10468869-10469134 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 58, 46

Conread position: 382-648
Cow position: chr10:28152492-28152225 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 196

Conread position: 382-648
Cow position: chr10:45658033-45658310 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 49

Conread position: 382-649
Cow position: chr10:50134919-50134647 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 45

Conread position: 382-652
Cow position: chr10:15817905-15817623 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 104

Conread position: 382-653
Cow position: chr10:12486151-12486420 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 32, 55

Conread position: 382-653
Cow position: chr10:48741271-48741006 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 52

Conread position: 382-655
Cow position: chr10:30741266-30741534 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 163

Conread position: 382-659
Cow position: chr10:24561099-24560807 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 92, 38

Conread position: 382-661
Cow position: chr10:56475354-56475638 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 52

Conread position: 382-661
Cow position: chr10:63276280-63276573 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 47

Conread position: 382-666
Cow position: chr10:54476994-54477266 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 89, 37

Conread position: 386-560
Cow position: chr10:52069594-52069419 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 31, 45

Conread position: 386-651
Cow position: chr10:23096891-23096625 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 51

Conread position: 386-653
Cow position: chr10:28176498-28176226 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 52

Conread position: 386-653
Cow position: chr10:43438766-43439030 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 62

Conread position: 386-661
Cow position: chr10:21462130-21462416 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 122

Conread position: 386-661
Cow position: chr10:49045735-49046002 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 63

Conread position: 386-661
Cow position: chr10:61510049-61509764 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 48

Conread position: 388-559
Cow position: chr10:20997388-20997223 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 45

Conread position: 388-617
Cow position: chr10:2974189-2973966 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 41

Conread position: 388-648
Cow position: chr10:16683917-16683658 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 178

Conread position: 399-653
Cow position: chr10:2849253-2849505 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 32

Conread position: 400-599
Cow position: chr10:63883852-63884047 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 25

Conread position: 415-611
Cow position: chr10:26209324-26209128 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 146, 22

Conread position: 432-671
Cow position: chr10:9656586-9656331 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 433-653
Cow position: chr10:64042024-64042260 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 8

Conread position: 437-616
Cow position: chr10:15115555-15115739 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 437-664
Cow position: chr10:2535513-2535748 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 227

Conread position: 441-607
Cow position: chr10:40744061-40744228 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 59

Conread position: 441-608
Cow position: chr10:16740121-16739952 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 132

Conread position: 442-661
Cow position: chr10:14817214-14816977 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 100

Conread position: 443-615
Cow position: chr10:67260579-67260408 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 101

Conread position: 444-601
Cow position: chr10:52278673-52278834 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 444-661
Cow position: chr10:10027523-10027758 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 58

Conread position: 445-653
Cow position: chr10:13927684-13927900 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 115, 0

Conread position: 450-651
Cow position: chr10:38205756-38205543 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 451-653
Cow position: chr10:52125729-52125516 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 21, 118

Conread position: 461-653
Cow position: chr10:46150836-46151044 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 476-640
Cow position: chr10:17448217-17448046 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 109

Conread position: 482-661
Cow position: chr10:11060540-11060348 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 487-653
Cow position: chr10:6555814-6555644 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 77

Conread position: 491-660
Cow position: chr10:37971765-37971945 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.