Cow genome map


           Conread name:
           Pig3-SRG8001B15
        

               Conread position:
               363-649
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               367-626
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               372-598
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               99, 128
               

               Conread position:
               372-599
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               99, 47
               

               Conread position:
               372-600
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               99, 41
               

               Conread position:
               372-608
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 104
               

               Conread position:
               372-648
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 68
               

               Conread position:
               372-657
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 102
               

               Conread position:
               372-659
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               372-659
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               100, 44
               

               Conread position:
               372-661
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               372-661
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               372-671
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               60, 46
               

               Conread position:
               374-567
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               380-653
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               382-537
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 55
               

               Conread position:
               382-542
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               382-569
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               382-580
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               382-597
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               382-598
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               35, 131
               

               Conread position:
               382-599
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               382-599
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               382-607
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               89, 105
               

               Conread position:
               382-613
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               35, 124
               

               Conread position:
               382-616
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               382-619
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               179, 37
               

               Conread position:
               382-648
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               382-652
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               382-652
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               35, 52
               

               Conread position:
               382-653
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               89, 71
               

               Conread position:
               382-653
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               382-654
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               382-655
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 55
               

               Conread position:
               382-661
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               382-672
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 60
               

               Conread position:
               383-528
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               383-601
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               383-648
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               383-652
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               100, 21
               

               Conread position:
               383-653
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               175, 36
               

               Conread position:
               384-580
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 118
               

               Conread position:
               384-608
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               91, 46
               

               Conread position:
               386-589
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 43
               

               Conread position:
               386-653
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               388-529
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               388-567
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               388-653
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               394-653
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               415-673
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               416-618
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 85
               

               Conread position:
               426-653
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 18
               

               Conread position:
               426-655
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               430-653
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 7
               

               Conread position:
               437-599
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               438-653
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               440-662
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               443-617
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 142
               

               Conread position:
               447-625
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               115, 52
               

               Conread position:
               451-611
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               118, 8
               

               Conread position:
               453-603
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               458-613
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               470-591
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               471-611
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               487-599
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               491-599
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 0
               
Show alignments to all cow chromosomes.