Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 350-592 |
| Cow position: | chr14:46998208-46997957 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 371-591 |
| Cow position: | chr14:33830438-33830221 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 100, 43 |
| Conread position: | 372-599 |
| Cow position: | chr14:41128035-41127820 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 42 |
| Conread position: | 372-648 |
| Cow position: | chr14:8786411-8786690 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 80, 47 |
| Conread position: | 372-653 |
| Cow position: | chr14:50589243-50589548 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 210 |
| Conread position: | 372-655 |
| Cow position: | chr14:49021762-49022040 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 373-607 |
| Cow position: | chr14:21933201-21933439 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 373-654 |
| Cow position: | chr14:19618611-19618902 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 379-653 |
| Cow position: | chr14:9020161-9019883 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 40, 188 |
| Conread position: | 382-572 |
| Cow position: | chr14:20384854-20385045 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 382-572 |
| Cow position: | chr14:37447339-37447523 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 89, 59 |
| Conread position: | 382-594 |
| Cow position: | chr14:19863302-19863518 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-599 |
| Cow position: | chr14:4202963-4203187 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 382-599 |
| Cow position: | chr14:19129640-19129417 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 382-600 |
| Cow position: | chr14:28115055-28115272 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 382-606 |
| Cow position: | chr14:20712559-20712783 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 382-611 |
| Cow position: | chr14:7290929-7290701 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 382-649 |
| Cow position: | chr14:27823564-27823278 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 382-651 |
| Cow position: | chr14:24387579-24387295 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 382-657 |
| Cow position: | chr14:37678871-37679146 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 382-667 |
| Cow position: | chr14:18657473-18657757 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 382-671 |
| Cow position: | chr14:24236954-24236646 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 90, 54 |
| Conread position: | 382-672 |
| Cow position: | chr14:48773035-48772741 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 92, 65 |
| Conread position: | 383-634 |
| Cow position: | chr14:46654414-46654668 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 383-653 |
| Cow position: | chr14:16352475-16352200 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 117 |
| Conread position: | 388-628 |
| Cow position: | chr14:26433115-26433354 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 62, 216 |
| Conread position: | 408-648 |
| Cow position: | chr14:13928682-13928429 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 146 |
| Conread position: | 409-660 |
| Cow position: | chr14:23103896-23104161 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 415-607 |
| Cow position: | chr14:19594039-19594233 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 427-673 |
| Cow position: | chr14:7342545-7342289 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 430-653 |
| Cow position: | chr14:43192922-43192706 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 433-569 |
| Cow position: | chr14:803766-803629 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 90 |
| Conread position: | 433-603 |
| Cow position: | chr14:10609761-10609587 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 433-653 |
| Cow position: | chr14:35420682-35420920 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 434-672 |
| Cow position: | chr14:28304701-28304964 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 436-595 |
| Cow position: | chr14:15039537-15039696 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 437-615 |
| Cow position: | chr14:8923508-8923691 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 437-652 |
| Cow position: | chr14:4848424-4848193 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 438-552 |
| Cow position: | chr14:26499681-26499566 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 438-572 |
| Cow position: | chr14:24839857-24839721 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 438-618 |
| Cow position: | chr14:48900252-48900069 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 442-607 |
| Cow position: | chr14:28924240-28924071 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 442-672 |
| Cow position: | chr14:29965091-29964840 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 443-611 |
| Cow position: | chr14:35381661-35381491 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 443-628 |
| Cow position: | chr14:34331255-34331446 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 446-595 |
| Cow position: | chr14:38285902-38286065 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 489-672 |
| Cow position: | chr14:33468794-33468608 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 504-652 |
| Cow position: | chr14:25912660-25912497 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.