Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 371-653 |
| Cow position: | chr16:28396196-28395890 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 372-602 |
| Cow position: | chr16:12633788-12634021 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 105, 41 |
| Conread position: | 372-602 |
| Cow position: | chr16:46552708-46552928 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 372-607 |
| Cow position: | chr16:54664899-54664659 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 372-657 |
| Cow position: | chr16:11775147-11774845 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 74, 47 |
| Conread position: | 373-569 |
| Cow position: | chr16:8076605-8076402 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 373-647 |
| Cow position: | chr16:21317693-21317414 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 373-648 |
| Cow position: | chr16:41530388-41530112 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 373-672 |
| Cow position: | chr16:42340099-42340396 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 380-655 |
| Cow position: | chr16:23955921-23955628 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 381-569 |
| Cow position: | chr16:52889499-52889312 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 90, 39 |
| Conread position: | 382-536 |
| Cow position: | chr16:9933070-9933224 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 126 |
| Conread position: | 382-559 |
| Cow position: | chr16:32327562-32327747 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 382-591 |
| Cow position: | chr16:35188166-35188373 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-597 |
| Cow position: | chr16:25380582-25380365 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 382-599 |
| Cow position: | chr16:10773044-10773254 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 382-600 |
| Cow position: | chr16:12501250-12501026 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 382-600 |
| Cow position: | chr16:38243750-38243530 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 89, 105 |
| Conread position: | 382-600 |
| Cow position: | chr16:43801007-43800784 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 171 |
| Conread position: | 382-600 |
| Cow position: | chr16:47854855-47855069 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 382-611 |
| Cow position: | chr16:42444067-42444301 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 382-613 |
| Cow position: | chr16:13611542-13611305 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 382-616 |
| Cow position: | chr16:15960380-15960141 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 382-618 |
| Cow position: | chr16:43275933-43276170 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 96 |
| Conread position: | 382-643 |
| Cow position: | chr16:18205872-18206146 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 382-648 |
| Cow position: | chr16:11008255-11008524 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 172 |
| Conread position: | 382-648 |
| Cow position: | chr16:50688435-50688703 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 382-653 |
| Cow position: | chr16:52275219-52274934 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 382-655 |
| Cow position: | chr16:16597472-16597762 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 382-655 |
| Cow position: | chr16:22206988-22207260 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 5 |
| Conread position: | 382-655 |
| Cow position: | chr16:22984669-22984953 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 382-658 |
| Cow position: | chr16:55683211-55683504 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 120 |
| Conread position: | 382-659 |
| Cow position: | chr16:27262040-27261770 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 33, 127 |
| Conread position: | 382-664 |
| Cow position: | chr16:53813742-53813437 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 382-673 |
| Cow position: | chr16:49336140-49336440 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 384-586 |
| Cow position: | chr16:7619264-7619066 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 385-659 |
| Cow position: | chr16:39683185-39682892 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 386-665 |
| Cow position: | chr16:33405574-33405289 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 388-653 |
| Cow position: | chr16:11082920-11083197 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 393-591 |
| Cow position: | chr16:1220260-1220056 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 414-560 |
| Cow position: | chr16:46613950-46614090 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 415-613 |
| Cow position: | chr16:56844211-56844001 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 113 |
| Conread position: | 426-611 |
| Cow position: | chr16:13306917-13306730 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 23, 163 |
| Conread position: | 426-613 |
| Cow position: | chr16:33530363-33530555 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 434-580 |
| Cow position: | chr16:7394969-7394818 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 437-537 |
| Cow position: | chr16:55968408-55968509 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 437-625 |
| Cow position: | chr16:39165205-39165401 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 439-599 |
| Cow position: | chr16:22804629-22804466 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 440-670 |
| Cow position: | chr16:6609537-6609291 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 441-661 |
| Cow position: | chr16:11584434-11584199 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 106 |
| Conread position: | 442-600 |
| Cow position: | chr16:39202111-39202273 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 442-653 |
| Cow position: | chr16:53408959-53408746 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 29, 125 |
| Conread position: | 443-608 |
| Cow position: | chr16:7812663-7812831 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 6 |
| Conread position: | 443-611 |
| Cow position: | chr16:20647894-20648056 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 444-611 |
| Cow position: | chr16:32302034-32301862 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 447-655 |
| Cow position: | chr16:38250982-38251199 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 452-652 |
| Cow position: | chr16:13996214-13995996 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 452-653 |
| Cow position: | chr16:7496238-7496450 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 108, 98 |
| Conread position: | 460-607 |
| Cow position: | chr16:31484673-31484521 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 469-673 |
| Cow position: | chr16:38355428-38355210 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 490-654 |
| Cow position: | chr16:41807082-41806922 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 490-659 |
| Cow position: | chr16:12836209-12836034 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.