Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 382-540 |
| Cow position: | chr18:10117383-10117537 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 382-542 |
| Cow position: | chr18:47812348-47812507 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 121 |
| Conread position: | 382-592 |
| Cow position: | chr18:4182310-4182100 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 169 |
| Conread position: | 382-598 |
| Cow position: | chr18:16686458-16686240 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 382-613 |
| Cow position: | chr18:40759085-40759307 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 382-613 |
| Cow position: | chr18:51392758-51392531 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 179, 44 |
| Conread position: | 382-615 |
| Cow position: | chr18:39875380-39875148 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 178, 55 |
| Conread position: | 382-618 |
| Cow position: | chr18:22056001-22055756 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 382-625 |
| Cow position: | chr18:9066577-9066834 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 55 |
| Conread position: | 382-625 |
| Cow position: | chr18:20174250-20174003 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-646 |
| Cow position: | chr18:30586342-30586076 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 382-653 |
| Cow position: | chr18:36264887-36264614 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 382-655 |
| Cow position: | chr18:19849877-19849602 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 64, 112 |
| Conread position: | 382-664 |
| Cow position: | chr18:51691585-51691300 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 383-611 |
| Cow position: | chr18:3211752-3211987 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 216 |
| Conread position: | 386-607 |
| Cow position: | chr18:51656161-51655937 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 386-661 |
| Cow position: | chr18:7109011-7109308 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 386-661 |
| Cow position: | chr18:19646061-19646332 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 388-580 |
| Cow position: | chr18:56172137-56171935 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 124 |
| Conread position: | 388-655 |
| Cow position: | chr18:49038344-49038623 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 390-624 |
| Cow position: | chr18:15025557-15025785 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 408-552 |
| Cow position: | chr18:24977158-24977012 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 415-600 |
| Cow position: | chr18:52635160-52634972 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 415-608 |
| Cow position: | chr18:47416912-47417104 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 415-665 |
| Cow position: | chr18:51643449-51643190 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 429-611 |
| Cow position: | chr18:31557234-31557050 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 430-652 |
| Cow position: | chr18:18843943-18844177 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 430-653 |
| Cow position: | chr18:44908978-44909219 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 433-655 |
| Cow position: | chr18:25281964-25281743 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 38, 153 |
| Conread position: | 433-655 |
| Cow position: | chr18:32189583-32189348 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 434-654 |
| Cow position: | chr18:2438833-2438617 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 136 |
| Conread position: | 437-661 |
| Cow position: | chr18:29371798-29372045 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 440-668 |
| Cow position: | chr18:5711715-5711493 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 118, 48 |
| Conread position: | 443-572 |
| Cow position: | chr18:1607192-1607318 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 443-618 |
| Cow position: | chr18:56183565-56183394 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 43 |
| Conread position: | 443-653 |
| Cow position: | chr18:47693004-47693221 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 443-655 |
| Cow position: | chr18:10051686-10051916 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 33 |
| Conread position: | 451-653 |
| Cow position: | chr18:4851531-4851318 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 455-666 |
| Cow position: | chr18:42954114-42953897 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 459-608 |
| Cow position: | chr18:47485998-47486150 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 464-673 |
| Cow position: | chr18:29080766-29080978 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 9, 196 |
| Conread position: | 471-611 |
| Cow position: | chr18:45185838-45185982 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 5, 90 |
| Conread position: | 477-669 |
| Cow position: | chr18:48407712-48407915 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 478-673 |
| Cow position: | chr18:41702811-41703020 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 23 |
| Conread position: | 486-653 |
| Cow position: | chr18:51413572-51413748 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 492-655 |
| Cow position: | chr18:44206095-44205925 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 11 |
Show alignments to all cow chromosomes.