Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 372-558 |
| Cow position: | chr19:17273839-17273664 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 372-593 |
| Cow position: | chr19:39361033-39361258 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 47 |
| Conread position: | 372-603 |
| Cow position: | chr19:6516157-6516386 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 372-607 |
| Cow position: | chr19:23222526-23222760 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 372-671 |
| Cow position: | chr19:6531780-6532081 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 47 |
| Conread position: | 372-673 |
| Cow position: | chr19:13121383-13121076 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 373-646 |
| Cow position: | chr19:16694151-16693865 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 259 |
| Conread position: | 376-652 |
| Cow position: | chr19:41024118-41024409 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 378-652 |
| Cow position: | chr19:47671646-47671922 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 380-599 |
| Cow position: | chr19:53243576-53243359 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 382-542 |
| Cow position: | chr19:29070818-29070659 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 382-550 |
| Cow position: | chr19:10173215-10173047 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 382-569 |
| Cow position: | chr19:15863142-15862962 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 382-600 |
| Cow position: | chr19:25652852-25652638 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 382-600 |
| Cow position: | chr19:25807402-25807188 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 382-608 |
| Cow position: | chr19:18826661-18826434 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 90, 59 |
| Conread position: | 382-618 |
| Cow position: | chr19:33237077-33237310 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 382-652 |
| Cow position: | chr19:31536026-31536296 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 382-653 |
| Cow position: | chr19:10971194-10970919 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 382-673 |
| Cow position: | chr19:24137162-24137473 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 55 |
| Conread position: | 383-517 |
| Cow position: | chr19:12093904-12094046 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 383-572 |
| Cow position: | chr19:31595201-31595392 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 383-611 |
| Cow position: | chr19:53371996-53371766 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 386-628 |
| Cow position: | chr19:6079455-6079219 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 387-558 |
| Cow position: | chr19:51401107-51400938 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 388-653 |
| Cow position: | chr19:39385132-39384858 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 426-580 |
| Cow position: | chr19:43418347-43418507 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 147 |
| Conread position: | 426-653 |
| Cow position: | chr19:13840311-13840544 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 436-590 |
| Cow position: | chr19:33241552-33241395 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 436-625 |
| Cow position: | chr19:8876831-8876648 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 172, 38 |
| Conread position: | 437-673 |
| Cow position: | chr19:39795145-39795399 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 441-655 |
| Cow position: | chr19:2068225-2068455 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 443-600 |
| Cow position: | chr19:16105120-16104961 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 444-596 |
| Cow position: | chr19:35920814-35920966 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 445-673 |
| Cow position: | chr19:12698282-12698527 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 40 |
| Conread position: | 446-599 |
| Cow position: | chr19:54915729-54915568 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 447-603 |
| Cow position: | chr19:10114666-10114511 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 450-596 |
| Cow position: | chr19:7675201-7675351 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 486-665 |
| Cow position: | chr19:41347379-41347569 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.