Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 366-574 |
| Cow position: | chr2:58056962-58057166 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 371-572 |
| Cow position: | chr2:29734724-29734922 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 372-598 |
| Cow position: | chr2:40728255-40728481 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 99, 46 |
| Conread position: | 372-655 |
| Cow position: | chr2:42255338-42255622 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 373-599 |
| Cow position: | chr2:44081338-44081567 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 161 |
| Conread position: | 378-648 |
| Cow position: | chr2:15674454-15674725 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 382-548 |
| Cow position: | chr2:36105179-36105348 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 65, 96 |
| Conread position: | 382-589 |
| Cow position: | chr2:13935621-13935829 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 382-592 |
| Cow position: | chr2:73353705-73353915 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 382-593 |
| Cow position: | chr2:80963734-80963523 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-596 |
| Cow position: | chr2:76861549-76861329 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 382-599 |
| Cow position: | chr2:19294504-19294723 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 382-600 |
| Cow position: | chr2:46909526-46909305 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 36, 167 |
| Conread position: | 382-601 |
| Cow position: | chr2:32403059-32402836 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 382-604 |
| Cow position: | chr2:27337862-27337642 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 176, 48 |
| Conread position: | 382-611 |
| Cow position: | chr2:6038920-6039156 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 382-615 |
| Cow position: | chr2:39263403-39263635 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 382-617 |
| Cow position: | chr2:14626494-14626743 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 382-650 |
| Cow position: | chr2:13604380-13604649 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-653 |
| Cow position: | chr2:4016927-4016659 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 59, 31 |
| Conread position: | 382-653 |
| Cow position: | chr2:81348969-81348695 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 45 |
| Conread position: | 382-654 |
| Cow position: | chr2:12558617-12558347 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 382-655 |
| Cow position: | chr2:24218296-24218014 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 382-658 |
| Cow position: | chr2:48748816-48748543 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 382-661 |
| Cow position: | chr2:38658870-38658589 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 382-668 |
| Cow position: | chr2:17967117-17966828 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 382-673 |
| Cow position: | chr2:41452146-41452451 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 176, 60 |
| Conread position: | 383-653 |
| Cow position: | chr2:15250092-15250368 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 48 |
| Conread position: | 383-665 |
| Cow position: | chr2:38785691-38785389 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 386-618 |
| Cow position: | chr2:19502563-19502334 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 386-655 |
| Cow position: | chr2:47990352-47990623 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 386-655 |
| Cow position: | chr2:68190725-68190444 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 86, 129 |
| Conread position: | 386-662 |
| Cow position: | chr2:17114816-17114533 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 413-581 |
| Cow position: | chr2:79138193-79138363 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 415-598 |
| Cow position: | chr2:46124751-46124575 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 416-615 |
| Cow position: | chr2:5300539-5300744 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 420-619 |
| Cow position: | chr2:63718463-63718267 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 423-607 |
| Cow position: | chr2:45478646-45478457 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 426-672 |
| Cow position: | chr2:50766430-50766691 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 22 |
| Conread position: | 433-653 |
| Cow position: | chr2:39067466-39067697 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 433-655 |
| Cow position: | chr2:12988553-12988773 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 38, 108 |
| Conread position: | 435-611 |
| Cow position: | chr2:14826240-14826420 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 437-589 |
| Cow position: | chr2:46125826-46125680 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 437-664 |
| Cow position: | chr2:11631492-11631735 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 441-654 |
| Cow position: | chr2:41007571-41007341 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 442-672 |
| Cow position: | chr2:71486749-71486995 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 443-613 |
| Cow position: | chr2:34474324-34474154 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 443-671 |
| Cow position: | chr2:46351810-46351565 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 225 |
| Conread position: | 444-653 |
| Cow position: | chr2:32488685-32488469 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 116, 30 |
| Conread position: | 444-653 |
| Cow position: | chr2:44197855-44198081 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 6 |
| Conread position: | 447-655 |
| Cow position: | chr2:53491475-53491258 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 452-661 |
| Cow position: | chr2:21049346-21049126 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 471-653 |
| Cow position: | chr2:15653111-15652935 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 477-655 |
| Cow position: | chr2:16109732-16109544 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 479-673 |
| Cow position: | chr2:78379410-78379200 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 503-653 |
| Cow position: | chr2:31122915-31123066 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 87 |
Show alignments to all cow chromosomes.