Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 362-591 |
| Cow position: | chr21:40192344-40192119 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 14 |
| Conread position: | 372-606 |
| Cow position: | chr21:17183888-17184119 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 71, 47 |
| Conread position: | 372-611 |
| Cow position: | chr21:28733949-28733706 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 372-613 |
| Cow position: | chr21:39401559-39401791 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 372-655 |
| Cow position: | chr21:29014948-29014651 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 372-661 |
| Cow position: | chr21:38449482-38449179 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 64, 138 |
| Conread position: | 373-600 |
| Cow position: | chr21:30835329-30835559 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 373-648 |
| Cow position: | chr21:1059044-1059317 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 127 |
| Conread position: | 381-603 |
| Cow position: | chr21:47760743-47760967 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 178, 38 |
| Conread position: | 382-572 |
| Cow position: | chr21:40432425-40432608 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 382-599 |
| Cow position: | chr21:3818185-3818405 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-605 |
| Cow position: | chr21:41579731-41579956 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 382-608 |
| Cow position: | chr21:868950-868718 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 382-610 |
| Cow position: | chr21:30607114-30606891 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 174 |
| Conread position: | 382-611 |
| Cow position: | chr21:42007488-42007255 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 102 |
| Conread position: | 382-613 |
| Cow position: | chr21:24642495-24642725 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 382-615 |
| Cow position: | chr21:3361038-3360807 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 137, 67 |
| Conread position: | 382-618 |
| Cow position: | chr21:47363763-47363519 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 382-648 |
| Cow position: | chr21:6997915-6998200 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 382-648 |
| Cow position: | chr21:27863540-27863260 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 382-652 |
| Cow position: | chr21:39509414-39509145 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 382-653 |
| Cow position: | chr21:957647-957933 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 382-653 |
| Cow position: | chr21:4399778-4400057 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 382-653 |
| Cow position: | chr21:12461995-12461705 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 382-660 |
| Cow position: | chr21:18064938-18064666 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 382-671 |
| Cow position: | chr21:21907454-21907158 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 382-673 |
| Cow position: | chr21:1511266-1511569 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 383-544 |
| Cow position: | chr21:36789767-36789932 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 383-588 |
| Cow position: | chr21:47714029-47713826 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 383-653 |
| Cow position: | chr21:45355812-45356079 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 59 |
| Conread position: | 383-660 |
| Cow position: | chr21:40134136-40134417 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 384-660 |
| Cow position: | chr21:6909902-6909618 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 386-655 |
| Cow position: | chr21:42209652-42209378 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 387-580 |
| Cow position: | chr21:42022262-42022449 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 388-598 |
| Cow position: | chr21:19258805-19259013 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 410-611 |
| Cow position: | chr21:27712245-27712030 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 413-588 |
| Cow position: | chr21:25383030-25383210 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 436-611 |
| Cow position: | chr21:40475528-40475705 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 443-657 |
| Cow position: | chr21:28244506-28244735 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 443-659 |
| Cow position: | chr21:23980147-23979908 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 443-673 |
| Cow position: | chr21:31159437-31159674 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 446-652 |
| Cow position: | chr21:71625-71849 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 107 |
| Conread position: | 463-661 |
| Cow position: | chr21:31659091-31658882 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 473-653 |
| Cow position: | chr21:8986088-8986290 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 490-661 |
| Cow position: | chr21:3430641-3430814 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 120 |
Show alignments to all cow chromosomes.