Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 362-603 |
| Cow position: | chr22:3842506-3842749 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 365-625 |
| Cow position: | chr22:9597689-9597421 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 366-673 |
| Cow position: | chr22:9372414-9372744 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 372-572 |
| Cow position: | chr22:21355240-21355042 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 42 |
| Conread position: | 372-600 |
| Cow position: | chr22:13222010-13222246 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 372-613 |
| Cow position: | chr22:27328990-27328748 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 372-653 |
| Cow position: | chr22:12315710-12316005 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 99, 71 |
| Conread position: | 372-661 |
| Cow position: | chr22:32326701-32327004 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 101, 44 |
| Conread position: | 379-653 |
| Cow position: | chr22:27275369-27275662 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 381-673 |
| Cow position: | chr22:11697289-11696977 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 60, 114 |
| Conread position: | 382-559 |
| Cow position: | chr22:27835440-27835618 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 120 |
| Conread position: | 382-584 |
| Cow position: | chr22:24628741-24628544 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 382-591 |
| Cow position: | chr22:26074830-26075041 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 382-591 |
| Cow position: | chr22:27740803-27741010 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-591 |
| Cow position: | chr22:30049661-30049446 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 382-599 |
| Cow position: | chr22:26339664-26339881 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 382-599 |
| Cow position: | chr22:28665194-28665408 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 382-603 |
| Cow position: | chr22:5595900-5595679 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 382-607 |
| Cow position: | chr22:33448173-33447945 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 382-611 |
| Cow position: | chr22:12389005-12389239 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 55 |
| Conread position: | 382-620 |
| Cow position: | chr22:44180499-44180745 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 382-622 |
| Cow position: | chr22:2627483-2627730 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 45 |
| Conread position: | 382-651 |
| Cow position: | chr22:534407-534684 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 382-653 |
| Cow position: | chr22:2523870-2524147 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 382-653 |
| Cow position: | chr22:37201762-37202045 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 382-655 |
| Cow position: | chr22:11130776-11131068 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 382-662 |
| Cow position: | chr22:23176529-23176252 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 382-672 |
| Cow position: | chr22:12929366-12929062 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 382-673 |
| Cow position: | chr22:8090620-8090329 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 383-667 |
| Cow position: | chr22:15668564-15668271 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 385-624 |
| Cow position: | chr22:26122808-26123049 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 386-583 |
| Cow position: | chr22:23122097-23121890 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 386-613 |
| Cow position: | chr22:28058140-28057908 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 387-578 |
| Cow position: | chr22:11458737-11458922 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 388-653 |
| Cow position: | chr22:12678506-12678224 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 392-655 |
| Cow position: | chr22:15490573-15490854 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 416-673 |
| Cow position: | chr22:23676017-23675756 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 145, 14 |
| Conread position: | 422-653 |
| Cow position: | chr22:12188534-12188277 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 422-653 |
| Cow position: | chr22:12195621-12195363 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 426-599 |
| Cow position: | chr22:13878131-13878305 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 426-655 |
| Cow position: | chr22:25809325-25809082 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 426-673 |
| Cow position: | chr22:15424088-15424333 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 433-597 |
| Cow position: | chr22:23372907-23372738 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 433-653 |
| Cow position: | chr22:8733380-8733149 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 152 |
| Conread position: | 433-653 |
| Cow position: | chr22:21890398-21890169 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 433-655 |
| Cow position: | chr22:1500848-1501083 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 156 |
| Conread position: | 434-655 |
| Cow position: | chr22:10122339-10122567 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 442-595 |
| Cow position: | chr22:23398437-23398280 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 443-599 |
| Cow position: | chr22:2502794-2502954 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 443-600 |
| Cow position: | chr22:977138-976971 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 111, 62 |
| Conread position: | 443-655 |
| Cow position: | chr22:4156849-4156617 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 452-653 |
| Cow position: | chr22:28937955-28937745 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 74 |
| Conread position: | 459-617 |
| Cow position: | chr22:3486788-3486632 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 459-660 |
| Cow position: | chr22:4060963-4060744 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 464-653 |
| Cow position: | chr22:1821596-1821392 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 465-654 |
| Cow position: | chr22:10402956-10402751 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.