Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 333-573 |
| Cow position: | chr23:4795039-4795275 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 372-599 |
| Cow position: | chr23:37065746-37065983 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 372-651 |
| Cow position: | chr23:12363715-12363418 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 372-652 |
| Cow position: | chr23:24685155-24685442 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 372-658 |
| Cow position: | chr23:40778170-40778471 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 373-558 |
| Cow position: | chr23:15710168-15709982 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 381-599 |
| Cow position: | chr23:13511647-13511859 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 381-673 |
| Cow position: | chr23:3909970-3909689 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 382-543 |
| Cow position: | chr23:1921312-1921152 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 382-553 |
| Cow position: | chr23:4329767-4329590 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 32, 55 |
| Conread position: | 382-569 |
| Cow position: | chr23:3262582-3262396 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 382-572 |
| Cow position: | chr23:27544742-27544932 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 89, 52 |
| Conread position: | 382-572 |
| Cow position: | chr23:36309334-36309525 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 382-588 |
| Cow position: | chr23:16700125-16699919 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 58, 37 |
| Conread position: | 382-591 |
| Cow position: | chr23:6995069-6994857 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 382-597 |
| Cow position: | chr23:13945949-13946169 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 382-598 |
| Cow position: | chr23:18296722-18296940 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-600 |
| Cow position: | chr23:18036744-18036523 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 382-611 |
| Cow position: | chr23:22574003-22573763 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-613 |
| Cow position: | chr23:12334120-12334345 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 382-621 |
| Cow position: | chr23:38455268-38455024 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 382-642 |
| Cow position: | chr23:14739361-14739624 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 382-648 |
| Cow position: | chr23:22804639-22804920 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 382-653 |
| Cow position: | chr23:4726701-4726995 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 382-653 |
| Cow position: | chr23:23409653-23409918 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 382-653 |
| Cow position: | chr23:34356557-34356844 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 382-653 |
| Cow position: | chr23:38973760-38974038 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 127 |
| Conread position: | 382-655 |
| Cow position: | chr23:3890651-3890367 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 382-655 |
| Cow position: | chr23:13520364-13520649 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 382-655 |
| Cow position: | chr23:18902134-18901861 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 382-662 |
| Cow position: | chr23:24509615-24509896 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 382-673 |
| Cow position: | chr23:3522664-3522966 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 383-611 |
| Cow position: | chr23:38208640-38208874 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 48 |
| Conread position: | 386-611 |
| Cow position: | chr23:33622233-33622004 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 386-664 |
| Cow position: | chr23:24984250-24983977 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 388-613 |
| Cow position: | chr23:14164481-14164249 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 388-648 |
| Cow position: | chr23:283474-283204 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 415-604 |
| Cow position: | chr23:22414353-22414172 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 430-591 |
| Cow position: | chr23:26283685-26283848 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 433-608 |
| Cow position: | chr23:35503747-35503916 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 127, 41 |
| Conread position: | 436-607 |
| Cow position: | chr23:30311965-30311783 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 443-591 |
| Cow position: | chr23:39793650-39793802 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 443-653 |
| Cow position: | chr23:1981685-1981470 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 443-655 |
| Cow position: | chr23:26986297-26986067 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 444-608 |
| Cow position: | chr23:4972741-4972908 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 444-653 |
| Cow position: | chr23:7696533-7696744 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 27, 119 |
| Conread position: | 444-654 |
| Cow position: | chr23:9805776-9805559 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 447-591 |
| Cow position: | chr23:20435087-20434938 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 449-603 |
| Cow position: | chr23:14569521-14569363 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 451-606 |
| Cow position: | chr23:16447705-16447548 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 451-653 |
| Cow position: | chr23:35656394-35656612 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 21, 10 |
| Conread position: | 453-611 |
| Cow position: | chr23:18739481-18739318 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 454-653 |
| Cow position: | chr23:38267413-38267203 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 34 |
| Conread position: | 477-653 |
| Cow position: | chr23:17012730-17012539 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 489-603 |
| Cow position: | chr23:26591890-26591774 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 71, 34 |
Show alignments to all cow chromosomes.