Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 366-611 |
| Cow position: | chr24:33944274-33944522 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 371-542 |
| Cow position: | chr24:3152704-3152531 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 372-590 |
| Cow position: | chr24:6450374-6450588 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 382-567 |
| Cow position: | chr24:43364247-43364431 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 89, 133 |
| Conread position: | 382-568 |
| Cow position: | chr24:31324169-31324358 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 167 |
| Conread position: | 382-569 |
| Cow position: | chr24:43432680-43432863 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 382-590 |
| Cow position: | chr24:16895549-16895341 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 382-591 |
| Cow position: | chr24:40130014-40130228 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 382-596 |
| Cow position: | chr24:24457358-24457147 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 382-598 |
| Cow position: | chr24:15508651-15508439 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 183, 36 |
| Conread position: | 382-598 |
| Cow position: | chr24:32204907-32204689 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 178, 68 |
| Conread position: | 382-600 |
| Cow position: | chr24:35150409-35150624 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-608 |
| Cow position: | chr24:20943054-20943273 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 89, 118 |
| Conread position: | 382-618 |
| Cow position: | chr24:29595923-29595685 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 382-625 |
| Cow position: | chr24:18314063-18313799 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 382-648 |
| Cow position: | chr24:17955554-17955294 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 64, 37 |
| Conread position: | 382-652 |
| Cow position: | chr24:27874489-27874748 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 382-652 |
| Cow position: | chr24:39523560-39523275 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-653 |
| Cow position: | chr24:6102716-6102999 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 382-654 |
| Cow position: | chr24:15861713-15861414 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 382-666 |
| Cow position: | chr24:43832410-43832713 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 32, 210 |
| Conread position: | 382-672 |
| Cow position: | chr24:35576647-35576362 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 383-661 |
| Cow position: | chr24:19800735-19801023 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 383-672 |
| Cow position: | chr24:16509859-16510168 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 34, 48 |
| Conread position: | 388-652 |
| Cow position: | chr24:17311324-17311054 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 389-613 |
| Cow position: | chr24:18614893-18615122 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 167 |
| Conread position: | 392-618 |
| Cow position: | chr24:19769385-19769621 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 392-653 |
| Cow position: | chr24:230173-230456 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 415-615 |
| Cow position: | chr24:44987451-44987251 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 421-655 |
| Cow position: | chr24:28699971-28700221 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 435-673 |
| Cow position: | chr24:33372493-33372742 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 438-673 |
| Cow position: | chr24:18750647-18750906 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 440-600 |
| Cow position: | chr24:35631922-35632087 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 440-661 |
| Cow position: | chr24:34896755-34896517 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 106 |
| Conread position: | 452-625 |
| Cow position: | chr24:36303361-36303174 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 455-653 |
| Cow position: | chr24:19186901-19187108 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 455-659 |
| Cow position: | chr24:29985025-29984808 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 135 |
| Conread position: | 462-611 |
| Cow position: | chr24:22567069-22567222 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 465-625 |
| Cow position: | chr24:38841448-38841290 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 32 |
| Conread position: | 474-653 |
| Cow position: | chr24:27810137-27810325 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 481-597 |
| Cow position: | chr24:29013952-29014071 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 512-653 |
| Cow position: | chr24:27719510-27719354 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.