Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 362-660 |
| Cow position: | chr28:8291321-8291625 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 366-600 |
| Cow position: | chr28:4355455-4355683 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 372-583 |
| Cow position: | chr28:7372215-7372002 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 372-611 |
| Cow position: | chr28:21363652-21363888 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 372-612 |
| Cow position: | chr28:1538078-1538305 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 372-654 |
| Cow position: | chr28:34248116-34247837 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 373-619 |
| Cow position: | chr28:32174537-32174788 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 117, 68 |
| Conread position: | 373-653 |
| Cow position: | chr28:7009069-7008776 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 99, 57 |
| Conread position: | 378-618 |
| Cow position: | chr28:24706815-24707052 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 378-652 |
| Cow position: | chr28:3492872-3492583 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 378-653 |
| Cow position: | chr28:4070882-4071163 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 380-598 |
| Cow position: | chr28:13090613-13090391 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 382-558 |
| Cow position: | chr28:5792623-5792800 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-581 |
| Cow position: | chr28:21598337-21598132 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 382-586 |
| Cow position: | chr28:26922450-26922245 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 382-596 |
| Cow position: | chr28:26743540-26743759 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 382-607 |
| Cow position: | chr28:4045769-4045993 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 48 |
| Conread position: | 382-608 |
| Cow position: | chr28:2523857-2524087 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 382-612 |
| Cow position: | chr28:27161411-27161178 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 89, 151 |
| Conread position: | 382-621 |
| Cow position: | chr28:1632738-1632503 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 382-623 |
| Cow position: | chr28:16085241-16085484 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 382-652 |
| Cow position: | chr28:25727294-25727572 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 26 |
| Conread position: | 382-653 |
| Cow position: | chr28:11346567-11346284 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 382-653 |
| Cow position: | chr28:30746811-30746533 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 382-653 |
| Cow position: | chr28:32365759-32366023 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 382-654 |
| Cow position: | chr28:18934369-18934641 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 382-655 |
| Cow position: | chr28:21844876-21845158 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 70 |
| Conread position: | 382-660 |
| Cow position: | chr28:4282573-4282277 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 382-660 |
| Cow position: | chr28:20124700-20124993 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 382-672 |
| Cow position: | chr28:3011356-3011044 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 35, 137 |
| Conread position: | 386-591 |
| Cow position: | chr28:5144597-5144393 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 386-591 |
| Cow position: | chr28:25677426-25677213 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 386-597 |
| Cow position: | chr28:19222229-19222016 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 386-655 |
| Cow position: | chr28:13267707-13267976 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 388-653 |
| Cow position: | chr28:30937740-30937478 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 45 |
| Conread position: | 415-661 |
| Cow position: | chr28:4185855-4186116 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 430-661 |
| Cow position: | chr28:7619189-7618948 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 231 |
| Conread position: | 431-660 |
| Cow position: | chr28:11059465-11059703 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 434-661 |
| Cow position: | chr28:5235847-5236087 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 128 |
| Conread position: | 436-652 |
| Cow position: | chr28:21008698-21008467 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 16, 87 |
| Conread position: | 437-652 |
| Cow position: | chr28:11816696-11816480 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 168 |
| Conread position: | 437-655 |
| Cow position: | chr28:9636487-9636250 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 443-590 |
| Cow position: | chr28:4765650-4765804 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 443-654 |
| Cow position: | chr28:25762997-25763206 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 108 |
| Conread position: | 443-661 |
| Cow position: | chr28:5205247-5205463 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 133 |
| Conread position: | 444-598 |
| Cow position: | chr28:25399850-25400004 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 116, 61 |
| Conread position: | 461-655 |
| Cow position: | chr28:5805665-5805869 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 477-611 |
| Cow position: | chr28:19024444-19024579 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 480-655 |
| Cow position: | chr28:20281772-20281955 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 62 |
Show alignments to all cow chromosomes.