Cow genome map

Conread name: Pig3-SRG8001B15

Conread position: 363-653
Cow position: chr3:3649349-3649063 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 198, 51

Conread position: 366-572
Cow position: chr3:74502449-74502247 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 7, 69

Conread position: 366-648
Cow position: chr3:75158230-75158526 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 61

Conread position: 368-618
Cow position: chr3:65019990-65019742 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 104, 16

Conread position: 372-544
Cow position: chr3:11711839-11712014 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 59

Conread position: 372-558
Cow position: chr3:23445015-23444825 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 372-569
Cow position: chr3:3638065-3638253 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 99, 42

Conread position: 372-580
Cow position: chr3:63269100-63269310 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 55

Conread position: 372-590
Cow position: chr3:38691529-38691308 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 55

Conread position: 372-607
Cow position: chr3:53739308-53739074 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 47, 59

Conread position: 372-637
Cow position: chr3:83215137-83215411 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 72

Conread position: 372-655
Cow position: chr3:39969990-39969685 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 373-612
Cow position: chr3:70401780-70402016 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 98, 41

Conread position: 373-664
Cow position: chr3:2393084-2392782 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 57

Conread position: 375-654
Cow position: chr3:42480498-42480772 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 13

Conread position: 378-648
Cow position: chr3:60597425-60597708 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 74, 134

Conread position: 378-668
Cow position: chr3:60389651-60389945 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 36

Conread position: 380-525
Cow position: chr3:70631902-70632051 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 57

Conread position: 380-672
Cow position: chr3:52652196-52651886 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 91, 61

Conread position: 381-652
Cow position: chr3:80564850-80565127 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 69

Conread position: 382-528
Cow position: chr3:43528355-43528199 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 32, 61

Conread position: 382-544
Cow position: chr3:65800479-65800634 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 57

Conread position: 382-551
Cow position: chr3:72019005-72019172 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 53

Conread position: 382-568
Cow position: chr3:7940668-7940483 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 50

Conread position: 382-575
Cow position: chr3:56489-56296 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 45

Conread position: 382-591
Cow position: chr3:26920797-26921007 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 17

Conread position: 382-596
Cow position: chr3:24935258-24935468 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 37

Conread position: 382-597
Cow position: chr3:48296597-48296803 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 79

Conread position: 382-611
Cow position: chr3:2506588-2506360 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 32

Conread position: 382-611
Cow position: chr3:21015073-21014837 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 382-611
Cow position: chr3:53046769-53046542 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 89, 48

Conread position: 382-611
Cow position: chr3:71231286-71231514 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 37

Conread position: 382-617
Cow position: chr3:72390973-72391202 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 31

Conread position: 382-618
Cow position: chr3:73820482-73820247 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 64, 48

Conread position: 382-628
Cow position: chr3:67930295-67930047 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 45

Conread position: 382-652
Cow position: chr3:27274417-27274702 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 51

Conread position: 382-653
Cow position: chr3:4050082-4050352 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 45

Conread position: 382-653
Cow position: chr3:22221207-22221502 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 130

Conread position: 382-653
Cow position: chr3:54434862-54435144 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 105

Conread position: 382-653
Cow position: chr3:64281044-64280762 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 28, 49

Conread position: 382-653
Cow position: chr3:71238044-71238325 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 41

Conread position: 382-653
Cow position: chr3:73764307-73764039 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 89, 10

Conread position: 382-654
Cow position: chr3:83490980-83491257 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 33, 22

Conread position: 382-655
Cow position: chr3:18393500-18393222 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 34

Conread position: 382-655
Cow position: chr3:73395009-73395293 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 37

Conread position: 382-660
Cow position: chr3:18459633-18459354 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 32

Conread position: 382-661
Cow position: chr3:15443842-15443542 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 37, 49

Conread position: 382-661
Cow position: chr3:23920541-23920242 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 47

Conread position: 382-672
Cow position: chr3:20993699-20993992 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 229

Conread position: 382-672
Cow position: chr3:37041302-37041609 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 61

Conread position: 382-673
Cow position: chr3:55712319-55712628 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 25, 0

Conread position: 383-618
Cow position: chr3:48810750-48810518 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 88, 32

Conread position: 383-653
Cow position: chr3:80740452-80740729 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 100

Conread position: 383-670
Cow position: chr3:65058590-65058892 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 36

Conread position: 386-653
Cow position: chr3:15655255-15654993 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 58

Conread position: 386-671
Cow position: chr3:48241508-48241801 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 51

Conread position: 388-569
Cow position: chr3:27545928-27545744 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 388-609
Cow position: chr3:27940249-27940026 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 31

Conread position: 388-651
Cow position: chr3:67744733-67744466 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 31

Conread position: 388-653
Cow position: chr3:50614531-50614799 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 49

Conread position: 388-654
Cow position: chr3:42584434-42584696 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 46

Conread position: 388-658
Cow position: chr3:29360252-29359983 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 46

Conread position: 421-660
Cow position: chr3:17134258-17134514 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 426-655
Cow position: chr3:58527320-58527555 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 16

Conread position: 429-655
Cow position: chr3:2637860-2638111 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 8

Conread position: 433-579
Cow position: chr3:3471980-3472125 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 125, 16

Conread position: 433-598
Cow position: chr3:21997851-21997682 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 434-655
Cow position: chr3:35074819-35075050 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 127, 35

Conread position: 437-580
Cow position: chr3:11292307-11292160 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 124
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 437-582
Cow position: chr3:81277527-81277381 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 139

Conread position: 437-651
Cow position: chr3:15160463-15160691 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 26

Conread position: 437-653
Cow position: chr3:30357464-30357685 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 18

Conread position: 438-597
Cow position: chr3:74787372-74787530 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 62

Conread position: 438-648
Cow position: chr3:14546944-14547170 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 105

Conread position: 439-648
Cow position: chr3:11715939-11716145 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 21

Conread position: 439-653
Cow position: chr3:40213090-40212859 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 38

Conread position: 440-597
Cow position: chr3:28735571-28735408 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 31, 91

Conread position: 440-655
Cow position: chr3:21867094-21866860 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 443-608
Cow position: chr3:56678404-56678234 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 443-638
Cow position: chr3:7427949-7428147 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 57

Conread position: 446-653
Cow position: chr3:51349773-51349974 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 130

Conread position: 454-657
Cow position: chr3:54905576-54905788 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 46

Conread position: 459-664
Cow position: chr3:44961041-44960831 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 18

Conread position: 463-658
Cow position: chr3:24596456-24596252 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 464-653
Cow position: chr3:78071823-78071616 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 471-653
Cow position: chr3:27246983-27246791 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 118

Conread position: 471-661
Cow position: chr3:75966805-75966598 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 89, 39

Conread position: 474-653
Cow position: chr3:18700132-18699932 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 474-655
Cow position: chr3:985993-986193 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 100, 88

Conread position: 477-654
Cow position: chr3:59681922-59681730 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Show alignments to all cow chromosomes.