Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 371-607 |
| Cow position: | chr6:65870970-65871211 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 372-580 |
| Cow position: | chr6:11830136-11830339 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 99, 126 |
| Conread position: | 372-599 |
| Cow position: | chr6:51674854-51675079 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 372-603 |
| Cow position: | chr6:61142623-61142392 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 99, 206 |
| Conread position: | 372-661 |
| Cow position: | chr6:23695935-23696241 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 378-673 |
| Cow position: | chr6:60118097-60118392 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 381-660 |
| Cow position: | chr6:26728574-26728297 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 177, 18 |
| Conread position: | 381-673 |
| Cow position: | chr6:16288102-16287806 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 382-548 |
| Cow position: | chr6:54036188-54036026 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 382-561 |
| Cow position: | chr6:54368947-54368774 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 382-570 |
| Cow position: | chr6:38614767-38614952 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 382-572 |
| Cow position: | chr6:4864597-4864405 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 382-590 |
| Cow position: | chr6:38207540-38207330 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 382-599 |
| Cow position: | chr6:54867465-54867688 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-603 |
| Cow position: | chr6:4468719-4468938 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 382-607 |
| Cow position: | chr6:4383437-4383658 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 176, 33 |
| Conread position: | 382-609 |
| Cow position: | chr6:143418-143192 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 382-625 |
| Cow position: | chr6:54479201-54478962 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 382-653 |
| Cow position: | chr6:16625892-16626167 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 196 |
| Conread position: | 382-653 |
| Cow position: | chr6:37149139-37149422 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-655 |
| Cow position: | chr6:13565034-13565328 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 5, 49 |
| Conread position: | 382-658 |
| Cow position: | chr6:62371223-62370942 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 382-667 |
| Cow position: | chr6:68652402-68652113 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-671 |
| Cow position: | chr6:67281848-67282142 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 383-569 |
| Cow position: | chr6:48468956-48469138 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 383-608 |
| Cow position: | chr6:51835350-51835576 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 385-599 |
| Cow position: | chr6:55535795-55535581 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 386-611 |
| Cow position: | chr6:35842610-35842840 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 388-646 |
| Cow position: | chr6:36454634-36454381 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 394-612 |
| Cow position: | chr6:47339394-47339170 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 409-661 |
| Cow position: | chr6:66570419-66570673 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 426-653 |
| Cow position: | chr6:1103747-1103505 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 426-653 |
| Cow position: | chr6:23402000-23401755 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 426-661 |
| Cow position: | chr6:22850260-22850004 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 433-661 |
| Cow position: | chr6:19996618-19996862 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 133, 10 |
| Conread position: | 435-655 |
| Cow position: | chr6:51530187-51529947 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 436-591 |
| Cow position: | chr6:67806011-67805852 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 438-625 |
| Cow position: | chr6:5302414-5302226 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 440-661 |
| Cow position: | chr6:12669108-12669346 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 442-652 |
| Cow position: | chr6:24468385-24468160 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 443-647 |
| Cow position: | chr6:37692762-37692983 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 447-672 |
| Cow position: | chr6:43651767-43651982 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 450-628 |
| Cow position: | chr6:57287643-57287461 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 109, 135 |
| Conread position: | 451-640 |
| Cow position: | chr6:9832225-9832424 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 477-653 |
| Cow position: | chr6:53346020-53346206 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 502-652 |
| Cow position: | chr6:50577591-50577754 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.