Cow genome map
| Conread name: | Pig3-SRG8001B15 |
| Conread position: | 366-556 |
| Cow position: | chr8:5225133-5224949 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 82, 53 |
| Conread position: | 372-556 |
| Cow position: | chr8:49687307-49687122 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 140 |
| Conread position: | 372-558 |
| Cow position: | chr8:1936759-1936945 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 99, 170 |
| Conread position: | 372-559 |
| Cow position: | chr8:60576139-60575960 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 372-599 |
| Cow position: | chr8:45127789-45127560 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 99, 54 |
| Conread position: | 372-608 |
| Cow position: | chr8:15394949-15394710 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 99, 140 |
| Conread position: | 372-608 |
| Cow position: | chr8:37292174-37291938 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 372-624 |
| Cow position: | chr8:17232451-17232196 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 372-654 |
| Cow position: | chr8:5893855-5894139 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 117 |
| Conread position: | 373-583 |
| Cow position: | chr8:53558693-53558484 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 68 |
| Conread position: | 382-586 |
| Cow position: | chr8:24390276-24390067 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 382-591 |
| Cow position: | chr8:37334094-37334299 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 382-600 |
| Cow position: | chr8:37882268-37882490 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 382-608 |
| Cow position: | chr8:61067214-61067434 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 382-611 |
| Cow position: | chr8:60485130-60485362 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 382-613 |
| Cow position: | chr8:20837047-20837275 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-613 |
| Cow position: | chr8:21382771-21382537 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 382-613 |
| Cow position: | chr8:51208695-51208943 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 382-623 |
| Cow position: | chr8:50310932-50310676 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 382-625 |
| Cow position: | chr8:18081459-18081706 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 382-653 |
| Cow position: | chr8:4500413-4500699 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 382-655 |
| Cow position: | chr8:13813501-13813228 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 382-655 |
| Cow position: | chr8:27138871-27138585 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 382-655 |
| Cow position: | chr8:55901105-55900810 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 382-660 |
| Cow position: | chr8:28228172-28228457 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 382-661 |
| Cow position: | chr8:6724419-6724146 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 382-667 |
| Cow position: | chr8:1394151-1394435 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 383-651 |
| Cow position: | chr8:59250655-59250933 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 383-671 |
| Cow position: | chr8:19011872-19011587 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 386-607 |
| Cow position: | chr8:6073892-6073666 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 386-644 |
| Cow position: | chr8:36375584-36375320 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 386-648 |
| Cow position: | chr8:58520218-58520491 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 85, 168 |
| Conread position: | 386-651 |
| Cow position: | chr8:37636067-37635787 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 386-652 |
| Cow position: | chr8:53383325-53383605 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 388-613 |
| Cow position: | chr8:24328920-24328706 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 388-648 |
| Cow position: | chr8:33219029-33218765 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 392-556 |
| Cow position: | chr8:55283732-55283900 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 409-652 |
| Cow position: | chr8:34035623-34035883 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 62, 27 |
| Conread position: | 416-653 |
| Cow position: | chr8:45878992-45879238 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 416-653 |
| Cow position: | chr8:45925574-45925820 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 423-673 |
| Cow position: | chr8:32938830-32939096 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 430-607 |
| Cow position: | chr8:17247197-17247373 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 433-607 |
| Cow position: | chr8:55853307-55853485 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 435-653 |
| Cow position: | chr8:46743338-46743104 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 435-653 |
| Cow position: | chr8:48086631-48086413 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 125, 184 |
| Conread position: | 436-617 |
| Cow position: | chr8:43104320-43104134 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 437-613 |
| Cow position: | chr8:36729646-36729817 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 437-652 |
| Cow position: | chr8:55070693-55070923 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 437-653 |
| Cow position: | chr8:29413868-29414080 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 150 |
| Conread position: | 439-661 |
| Cow position: | chr8:44449625-44449388 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 119, 227 |
| Conread position: | 443-646 |
| Cow position: | chr8:642592-642387 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 126, 31 |
| Conread position: | 443-653 |
| Cow position: | chr8:32192672-32192889 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 28, 178 |
| Conread position: | 443-659 |
| Cow position: | chr8:20105891-20105654 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 444-591 |
| Cow position: | chr8:34042435-34042587 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 444-654 |
| Cow position: | chr8:25133557-25133766 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 446-655 |
| Cow position: | chr8:32457773-32458001 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 450-661 |
| Cow position: | chr8:6816681-6816455 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 450-662 |
| Cow position: | chr8:11124573-11124346 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 451-653 |
| Cow position: | chr8:19784852-19785069 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 474-599 |
| Cow position: | chr8:14109404-14109531 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 474-611 |
| Cow position: | chr8:11003786-11003646 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 493-652 |
| Cow position: | chr8:39898730-39898896 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.