Cow genome map

Conread name: Pig3-SRG8001B15

Conread position: 363-589
Cow position: chrX:5900388-5900610 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 90, 50

Conread position: 371-653
Cow position: chrX:17662666-17662392 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 81, 48

Conread position: 372-545
Cow position: chrX:27685176-27685350 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 50

Conread position: 372-599
Cow position: chrX:34401926-34402164 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 67

Conread position: 372-608
Cow position: chrX:34411770-34412013 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 38, 74

Conread position: 372-611
Cow position: chrX:27705515-27705756 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 66

Conread position: 372-615
Cow position: chrX:31252346-31252582 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 59

Conread position: 372-655
Cow position: chrX:38549375-38549678 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 99, 47

Conread position: 378-600
Cow position: chrX:32623501-32623729 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 76

Conread position: 381-616
Cow position: chrX:6690319-6690085 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 56, 33

Conread position: 382-523
Cow position: chrX:11589649-11589509 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 32

Conread position: 382-548
Cow position: chrX:2467824-2467988 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 79, 60

Conread position: 382-573
Cow position: chrX:39558412-39558219 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 45

Conread position: 382-595
Cow position: chrX:36514956-36514739 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 49

Conread position: 382-599
Cow position: chrX:23514077-23513866 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 48

Conread position: 382-600
Cow position: chrX:23561799-23562014 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 37

Conread position: 382-609
Cow position: chrX:17888480-17888255 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 18

Conread position: 382-611
Cow position: chrX:16416446-16416672 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 147

Conread position: 382-613
Cow position: chrX:6265661-6265425 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 49

Conread position: 382-613
Cow position: chrX:43730280-43730050 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 51

Conread position: 382-617
Cow position: chrX:12249740-12249983 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 67

Conread position: 382-625
Cow position: chrX:1616106-1615862 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 49

Conread position: 382-646
Cow position: chrX:15147249-15146977 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 89, 37

Conread position: 382-652
Cow position: chrX:32431559-32431827 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 190

Conread position: 382-653
Cow position: chrX:20339951-20339666 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 178, 36

Conread position: 382-654
Cow position: chrX:917427-917169 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 31

Conread position: 382-655
Cow position: chrX:4269123-4268839 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 51

Conread position: 382-660
Cow position: chrX:11614638-11614911 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 33

Conread position: 382-673
Cow position: chrX:7721927-7722222 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 127

Conread position: 383-580
Cow position: chrX:37119533-37119731 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 107

Conread position: 386-611
Cow position: chrX:36975894-36976121 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 56

Conread position: 387-597
Cow position: chrX:31627038-31626823 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 121

Conread position: 388-655
Cow position: chrX:4399067-4399349 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 63

Conread position: 392-661
Cow position: chrX:35985766-35986051 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 27

Conread position: 392-664
Cow position: chrX:43426240-43426511 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 182

Conread position: 421-569
Cow position: chrX:13359449-13359303 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 139, 29

Conread position: 426-599
Cow position: chrX:37489700-37489876 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 433-580
Cow position: chrX:20678150-20678003 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 56

Conread position: 433-621
Cow position: chrX:25411896-25412087 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 10

Conread position: 433-673
Cow position: chrX:48655769-48655520 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 436-673
Cow position: chrX:35658793-35659043 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 12

Conread position: 437-655
Cow position: chrX:17966331-17966555 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 155

Conread position: 441-659
Cow position: chrX:25207859-25207626 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 16

Conread position: 442-653
Cow position: chrX:27668961-27668733 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 443-533
Cow position: chrX:1572141-1572050 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 443-596
Cow position: chrX:38722119-38722278 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 443-649
Cow position: chrX:35268864-35269081 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 126, 59

Conread position: 444-552
Cow position: chrX:1397623-1397732 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 444-600
Cow position: chrX:9416684-9416525 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 446-655
Cow position: chrX:36283339-36283571 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 450-653
Cow position: chrX:4559744-4559963 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 42

Conread position: 452-654
Cow position: chrX:24054678-24054891 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 164

Conread position: 459-653
Cow position: chrX:23088870-23089064 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 28

Show alignments to all cow chromosomes.