Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 106-271 |
| Cow position: | chr10:49923480-49923644 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 106-283 |
| Cow position: | chr10:6489741-6489561 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 106-294 |
| Cow position: | chr10:37818685-37818873 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-298 |
| Cow position: | chr10:28395428-28395603 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 190, 46 |
| Conread position: | 107-198 |
| Cow position: | chr10:35246069-35246160 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-203 |
| Cow position: | chr10:3362493-3362397 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-204 |
| Cow position: | chr10:7816978-7816885 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 107-256 |
| Cow position: | chr10:35802498-35802645 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 102, 62 |
| Conread position: | 107-261 |
| Cow position: | chr10:20553053-20552906 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 107-262 |
| Cow position: | chr10:13765294-13765445 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 107-263 |
| Cow position: | chr10:8923148-8922987 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 107-263 |
| Cow position: | chr10:8923809-8923652 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 133 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 107-263 |
| Cow position: | chr10:38014236-38014090 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 130, 45 |
| Conread position: | 107-266 |
| Cow position: | chr10:35901200-35901050 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 107-268 |
| Cow position: | chr10:10148525-10148358 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 107-283 |
| Cow position: | chr10:45769913-45769738 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 107-292 |
| Cow position: | chr10:22786770-22786589 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 107-292 |
| Cow position: | chr10:52278601-52278409 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 107-294 |
| Cow position: | chr10:10043221-10043401 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 43 |
| Conread position: | 107-294 |
| Cow position: | chr10:10134855-10134663 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 107-295 |
| Cow position: | chr10:30224557-30224368 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 107-298 |
| Cow position: | chr10:15817922-15818111 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 177 |
| Conread position: | 107-298 |
| Cow position: | chr10:20095628-20095437 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 123 |
| Conread position: | 107-298 |
| Cow position: | chr10:32174602-32174422 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 189, 98 |
| Conread position: | 107-299 |
| Cow position: | chr10:1427914-1427718 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 167, 111 |
| Conread position: | 107-299 |
| Cow position: | chr10:6242575-6242758 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 189, 45 |
| Conread position: | 107-299 |
| Cow position: | chr10:34661443-34661639 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 107-325 |
| Cow position: | chr10:69998074-69998293 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 155 |
| Conread position: | 108-275 |
| Cow position: | chr10:39123828-39123996 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 108-310 |
| Cow position: | chr10:54504475-54504274 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 130, 158 |
| Conread position: | 109-298 |
| Cow position: | chr10:53674693-53674503 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 109-299 |
| Cow position: | chr10:24763346-24763155 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 128, 39 |
Show alignments to all cow chromosomes.