Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 90-287 |
| Cow position: | chr13:46329392-46329196 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 139, 13 |
| Conread position: | 103-203 |
| Cow position: | chr13:5082737-5082837 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-262 |
| Cow position: | chr13:25062498-25062653 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 134, 38 |
| Conread position: | 106-295 |
| Cow position: | chr13:34263279-34263105 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 131, 46 |
| Conread position: | 107-198 |
| Cow position: | chr13:966164-966255 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-239 |
| Cow position: | chr13:9593599-9593726 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 107-239 |
| Cow position: | chr13:18172429-18172559 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 107-246 |
| Cow position: | chr13:17439679-17439539 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 130, 123 |
| Conread position: | 107-255 |
| Cow position: | chr13:55316098-55315953 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 67 |
| Conread position: | 107-256 |
| Cow position: | chr13:43839461-43839310 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 54, 141 |
| Conread position: | 107-263 |
| Cow position: | chr13:30693796-30693945 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 107-286 |
| Cow position: | chr13:55295532-55295359 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 149 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 67, 45 |
| Conread position: | 107-290 |
| Cow position: | chr13:56155068-56154889 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 130, 40 |
| Conread position: | 107-292 |
| Cow position: | chr13:47007639-47007466 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-293 |
| Cow position: | chr13:15166910-15167090 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 107-293 |
| Cow position: | chr13:17821177-17820986 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-294 |
| Cow position: | chr13:15288838-15288656 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 107-294 |
| Cow position: | chr13:41806866-41807050 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 107-294 |
| Cow position: | chr13:61976874-61976690 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 107-298 |
| Cow position: | chr13:22085653-22085480 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 107-298 |
| Cow position: | chr13:49283254-49283062 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 133, 73 |
| Conread position: | 107-299 |
| Cow position: | chr13:13320875-13321061 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 107-299 |
| Cow position: | chr13:14927326-14927518 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 142 |
| Conread position: | 107-299 |
| Cow position: | chr13:20684030-20683842 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 107-301 |
| Cow position: | chr13:37484183-37483989 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 190 |
| Conread position: | 107-303 |
| Cow position: | chr13:17021638-17021437 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 77, 193 |
| Conread position: | 108-286 |
| Cow position: | chr13:17800164-17800339 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 134, 48 |
| Conread position: | 109-299 |
| Cow position: | chr13:152047-152223 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 187, 62 |
| Conread position: | 110-264 |
| Cow position: | chr13:37521286-37521135 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 130, 51 |
Show alignments to all cow chromosomes.